From 4394f8b4a2879971798e2bb96736b3c4dec092f0 Mon Sep 17 00:00:00 2001
From: Michał Górny <mgorny@gentoo.org>
Date: Fri, 7 Feb 2020 18:56:15 +0100
Subject: sci-biology/bcftools: Switch to PYTHON_MULTI_USEDEP API
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Signed-off-by: Michał Górny <mgorny@gentoo.org>
---
 sci-biology/bcftools/bcftools-1.9-r1.ebuild | 47 ---------------------------
 sci-biology/bcftools/bcftools-1.9-r2.ebuild | 49 +++++++++++++++++++++++++++++
 2 files changed, 49 insertions(+), 47 deletions(-)
 delete mode 100644 sci-biology/bcftools/bcftools-1.9-r1.ebuild
 create mode 100644 sci-biology/bcftools/bcftools-1.9-r2.ebuild

(limited to 'sci-biology')

diff --git a/sci-biology/bcftools/bcftools-1.9-r1.ebuild b/sci-biology/bcftools/bcftools-1.9-r1.ebuild
deleted file mode 100644
index 8141e6d22924..000000000000
--- a/sci-biology/bcftools/bcftools-1.9-r1.ebuild
+++ /dev/null
@@ -1,47 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_6 )
-
-inherit python-single-r1
-
-DESCRIPTION="Utilities for variant calling and manipulating VCF and BCF files"
-HOMEPAGE="http://www.htslib.org"
-SRC_URI="https://github.com/samtools/${PN}/releases/download/${PV}/${P}.tar.bz2"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-RDEPEND="
-	dev-lang/perl
-	dev-python/matplotlib[${PYTHON_USEDEP}]
-	=sci-libs/htslib-${PV}*:=
-	sys-libs/zlib:=
-	${PYTHON_DEPS}"
-DEPEND="${RDEPEND}"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-1.9-buildsystem.patch
-	"${FILESDIR}"/${PN}-1.9-fix-shebangs.patch
-)
-
-src_prepare() {
-	default
-
-	python_fix_shebang misc/{guess-ploidy,plot-roh}.py
-
-	# remove bundled htslib
-	rm -r htslib-* || die
-}
-
-src_configure() {
-	econf \
-		--disable-bcftools-plugins \
-		--disable-libgsl \
-		--disable-configure-htslib \
-		--with-htslib=system
-}
diff --git a/sci-biology/bcftools/bcftools-1.9-r2.ebuild b/sci-biology/bcftools/bcftools-1.9-r2.ebuild
new file mode 100644
index 000000000000..eafe63a1ee54
--- /dev/null
+++ b/sci-biology/bcftools/bcftools-1.9-r2.ebuild
@@ -0,0 +1,49 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_6 )
+
+inherit python-single-r1
+
+DESCRIPTION="Utilities for variant calling and manipulating VCF and BCF files"
+HOMEPAGE="http://www.htslib.org"
+SRC_URI="https://github.com/samtools/${PN}/releases/download/${PV}/${P}.tar.bz2"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+
+RDEPEND="
+	dev-lang/perl
+	$(python_gen_cond_dep '
+		dev-python/matplotlib[${PYTHON_MULTI_USEDEP}]
+	')
+	=sci-libs/htslib-${PV}*:=
+	sys-libs/zlib:=
+	${PYTHON_DEPS}"
+DEPEND="${RDEPEND}"
+
+PATCHES=(
+	"${FILESDIR}"/${PN}-1.9-buildsystem.patch
+	"${FILESDIR}"/${PN}-1.9-fix-shebangs.patch
+)
+
+src_prepare() {
+	default
+
+	python_fix_shebang misc/{guess-ploidy,plot-roh}.py
+
+	# remove bundled htslib
+	rm -r htslib-* || die
+}
+
+src_configure() {
+	econf \
+		--disable-bcftools-plugins \
+		--disable-libgsl \
+		--disable-configure-htslib \
+		--with-htslib=system
+}
-- 
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