diff options
| author |   Andrey Kislyuk <weaver@gentoo.org> | 2009-11-17 02:32:03 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2009-11-17 02:32:03 +0000 |
| commit | 0dbe63852c97bced315c62a016d1b086529363f7 (patch) | |
| tree | e17e8db90525143c01f8316c5609164bd64c2b83 /sci-biology/augustus | |
| parent | Marked ppc stable for bug #180246. (diff) | |
| download | historical-0dbe63852c97bced315c62a016d1b086529363f7.tar.gz historical-0dbe63852c97bced315c62a016d1b086529363f7.tar.bz2 historical-0dbe63852c97bced315c62a016d1b086529363f7.zip | |
Version bump
Package-Manager: portage-2.2_rc30/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/augustus')
| -rw-r--r-- | sci-biology/augustus/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/augustus/Manifest | 14 | ||||
| -rw-r--r-- | sci-biology/augustus/augustus-2.3.1.ebuild | 35 |
3 files changed, 44 insertions, 12 deletions
diff --git a/sci-biology/augustus/ChangeLog b/sci-biology/augustus/ChangeLog index 01cc7776104d..c74883ab47cb 100644 --- a/sci-biology/augustus/ChangeLog +++ b/sci-biology/augustus/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/augustus # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/ChangeLog,v 1.4 2009/10/31 17:55:20 maekke Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/ChangeLog,v 1.5 2009/11/17 02:32:03 weaver Exp $ + +*augustus-2.3.1 (16 Nov 2009) + + 16 Nov 2009; Andrey Kislyuk <weaver@gentoo.org> +augustus-2.3.1.ebuild: + Version bump 31 Oct 2009; Markus Meier <maekke@gentoo.org> augustus-2.1.ebuild: amd64/x86 stable, bug #290924 diff --git a/sci-biology/augustus/Manifest b/sci-biology/augustus/Manifest index 2d0d678dfa67..5bc19c9428fc 100644 --- a/sci-biology/augustus/Manifest +++ b/sci-biology/augustus/Manifest @@ -1,15 +1,7 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 - AUX augustus-2.1-glibc-2.10.patch 1575 RMD160 dc82bf9c2c1057d5ca30c89e44fff8e9f3a2be41 SHA1 65ac92017b5d449af8e7f6bc507f378e509d958b SHA256 e8593829395e7c7d85dc259b765a87584a1cd530f5f502564f57037c56dc0e29 DIST augustus.2.1.src.tar.gz 40596406 RMD160 c910eceda054c5e6bc908a263945b8fbbad99218 SHA1 fc0940c2567931f8b467fd196bf036d91cf21293 SHA256 c4f7d64391b9e279fd0c8f63c7c334b7abc6a4dfde86697670b18c5190433868 +DIST augustus.2.3.1.src.tar.gz 27314034 RMD160 232a5e7c6469e5bb2a4f839e823dcb86c9b45dc9 SHA1 a0d951c4bf13a7c8c2cbc7d43a94e4429fa4dfff SHA256 d8914deb74abe52d4a9922a3f976ca272bdf1f666f5a957ff4d011b5846690dd EBUILD augustus-2.1.ebuild 884 RMD160 0dafd8473adcb3d3f036f4c15b4380ba631dc873 SHA1 692d82a6f6d532e06f9865fa1b2fe3a1aa6fb1ba SHA256 ffb043abb81417f903290183f003580bf130b819bb230794253cd4cef10fa2f6 -MISC ChangeLog 921 RMD160 aabf5646d22dc6eac855678a2a60553b68234150 SHA1 0972a157cd996cf1621cbe233490830726e21d99 SHA256 7d861abe7dc040a7fc1eb33852000c7e6b6939024f38df2145de8a3db0e08e50 +EBUILD augustus-2.3.1.ebuild 882 RMD160 082783d42b521b0e8bc0878e123b563504a93f8a SHA1 b722fd3ee760367439e1996c9efb708788677ae9 SHA256 a714c501b3640293d81127ed13e747bcaf211023366115c1ed0403c47616dd61 +MISC ChangeLog 1042 RMD160 1ba950f2c710ea45e89fe158eb04156b21ca33ba SHA1 6154a74de2d81cb2262277d64c06f578f1308f0f SHA256 3fba3862392db0e5919b451a7dc5cefdfb3a9c86bba40a7bd03710fdf8b56763 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110 ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.11 (GNU/Linux) - -iEYEARECAAYFAkrseiIACgkQkKaRLQcq0GJBDgCfaKzn6CtwLjZnxLkGAbeuCTuZ -YdsAnRA1n8VQIDVC69PwRMvE4LC7yGEO -=SigG ------END PGP SIGNATURE----- diff --git a/sci-biology/augustus/augustus-2.3.1.ebuild b/sci-biology/augustus/augustus-2.3.1.ebuild new file mode 100644 index 000000000000..db0ff398729b --- /dev/null +++ b/sci-biology/augustus/augustus-2.3.1.ebuild @@ -0,0 +1,35 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/augustus-2.3.1.ebuild,v 1.1 2009/11/17 02:32:03 weaver Exp $ + +EAPI="2" + +inherit base eutils + +DESCRIPTION="Eukaryotic gene predictor" +HOMEPAGE="http://augustus.gobics.de/" +SRC_URI="http://augustus.gobics.de/binaries/${PN}.${PV}.src.tar.gz" + +LICENSE="Artistic" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86" + +DEPEND="" +RDEPEND="" + +S="${WORKDIR}/${PN}" + +src_compile() { + emake -C src clean || die + emake -C src || die +} + +src_install() { + dobin src/{augustus,etraining,consensusFinder,curve2hints} || die + insinto /usr/share/${PN} + doins -r config examples scripts docs || die + echo "AUGUSTUS_CONFIG_PATH=\"/usr/share/${PN}/config\"" > "${S}/99${PN}" + doenvd "${S}/99${PN}" || die + dodoc README*.TXT HISTORY.TXT retraining.html +} |