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diff --git a/sci-biology/bwa/bwa-0.4.5.ebuild b/sci-biology/bwa/bwa-0.4.5.ebuild
new file mode 100644
index 000000000000..f9ba31046a8e
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+++ b/sci-biology/bwa/bwa-0.4.5.ebuild
@@ -0,0 +1,26 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/bwa-0.4.5.ebuild,v 1.1 2009/02/26 22:11:27 weaver Exp $
+
+DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner"
+HOMEPAGE="http://maq.sourceforge.net/"
+SRC_URI="mirror://sourceforge/maq/${P}.tar.bz2"
+
+LICENSE="GPL-3"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=""
+RDEPEND=""
+
+src_unpack() {
+	unpack ${A}
+	sed -i 's/^CFLAGS=/CFLAGS+=/' "${S}/Makefile"
+}
+
+src_install() {
+	dobin bwa || die
+	doman bwa.1 || die
+	dodoc ChangeLog NEWS
+}