From 27cb519ad5f567d42b92f9d627114a593044c6f7 Mon Sep 17 00:00:00 2001 From: Olivier Fisette Date: Mon, 1 Nov 2004 01:28:06 +0000 Subject: Removed old version. Added 2.9.0 to x86. --- app-sci/emboss/ChangeLog | 6 ++- app-sci/emboss/Manifest | 6 +-- app-sci/emboss/emboss-2.8.0-r3.ebuild | 64 ----------------------------- app-sci/emboss/emboss-2.9.0.ebuild | 4 +- app-sci/emboss/files/digest-emboss-2.8.0-r3 | 1 - 5 files changed, 9 insertions(+), 72 deletions(-) delete mode 100644 app-sci/emboss/emboss-2.8.0-r3.ebuild delete mode 100644 app-sci/emboss/files/digest-emboss-2.8.0-r3 (limited to 'app-sci') diff --git a/app-sci/emboss/ChangeLog b/app-sci/emboss/ChangeLog index 4329892709fb..a09bff4dc2c0 100644 --- a/app-sci/emboss/ChangeLog +++ b/app-sci/emboss/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for app-sci/emboss # Copyright 2000-2004 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/app-sci/emboss/ChangeLog,v 1.14 2004/08/11 00:53:41 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/app-sci/emboss/ChangeLog,v 1.15 2004/11/01 01:28:06 ribosome Exp $ + + 31 Oct 2004; Olivier Fisette emboss-2.9.0.ebuild, + -emboss-2.8.0-r3.ebuild: + Removed old version. Added 2.9.0 to x86. 10 Aug 2004; Olivier Fisette emboss-2.8.0-r3.ebuild: diff --git a/app-sci/emboss/Manifest b/app-sci/emboss/Manifest index fc5a154136e6..63b20c0fb0eb 100644 --- a/app-sci/emboss/Manifest +++ b/app-sci/emboss/Manifest @@ -1,7 +1,5 @@ -MD5 ee26aa2794373e924d30b4d88f799a34 emboss-2.9.0.ebuild 1745 -MD5 fca87039630b1c699f127a291bacce8e ChangeLog 2644 +MD5 ba5c07ff5c0c006232e0b1a0bb99ba47 emboss-2.9.0.ebuild 1747 +MD5 1b0826c48804a608a2bb548e7c27dc93 ChangeLog 2789 MD5 6051afb1f26bf343082490327784b958 metadata.xml 1013 -MD5 2ec209cec869e531dccff400b3f4dd10 emboss-2.8.0-r3.ebuild 1882 -MD5 048d6642b77660671ad5c64cdc351df6 files/digest-emboss-2.8.0-r3 66 MD5 68e42b6377bb0887a0aeac76cf530854 files/digest-emboss-2.9.0 66 MD5 ef2dfa3d13837026f59c0cf5f04f67c5 files/22emboss-r1 110 diff --git a/app-sci/emboss/emboss-2.8.0-r3.ebuild b/app-sci/emboss/emboss-2.8.0-r3.ebuild deleted file mode 100644 index 05195fa84d32..000000000000 --- a/app-sci/emboss/emboss-2.8.0-r3.ebuild +++ /dev/null @@ -1,64 +0,0 @@ -# Copyright 1999-2004 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/app-sci/emboss/emboss-2.8.0-r3.ebuild,v 1.3 2004/08/11 00:53:41 ribosome Exp $ - -DESCRIPTION="The European Molecular Biology Open Software Suite: a sequence analysis package." -HOMEPAGE="http://www.emboss.org/" -SRC_URI="ftp://ftp.uk.embnet.org/pub/EMBOSS/EMBOSS-${PV}.tar.gz" -LICENSE="GPL-2 LGPL-2" - -SLOT="0" -KEYWORDS="x86" -IUSE="X png no-biodata" - -DEPEND="X? ( virtual/x11 ) - png? ( - sys-libs/zlib - media-libs/libpng - >=media-libs/gd-1.8 - ) - app-sci/primer3 - app-sci/clustalw" - -PDEPEND="!no-biodata? ( - app-sci/aaindex - app-sci/cutg - app-sci/prints - app-sci/prosite - app-sci/rebase - app-sci/transfac - )" - -S=${WORKDIR}/EMBOSS-${PV} - -src_compile() { - local EXTRA_CONF - ! use X && EXTRA_CONF="${EXTRA_CONF} --without-x" - ! use png && EXTRA_CONF="${EXTRA_CONF} --without-pngdriver" - - econf ${EXTRA_CONF} || die - # Do not install the JEMBOSS component (the --without-java configure option - # does not work). JEMBOSS will be available as a separate package. - sed -i -e 's/SUBDIRS = plplot ajax nucleus emboss test doc jemboss/SUBDIRS = plplot ajax nucleus emboss test doc/' Makefile - emake || die -} - -src_install() { - einstall || die - dodoc AUTHORS COPYING ChangeLog FAQ INSTALL LICENSE README THANKS NEWS - - # Install env file for setting libplplot and acd files path. - insinto /etc/env.d - newins ${FILESDIR}/22emboss-r1 22emboss - - # Include files necessary for EMBASSY packages and EMBOSS development. - insinto /usr/include/${PN} - doins plplot/*.h - doins ajax/*.h - doins nucleus/*.h - - # Symlink preinstalled docs to /usr/share/doc. - dosym /usr/share/EMBOSS/doc/manuals /usr/share/doc/${PF}/manuals - dosym /usr/share/EMBOSS/doc/programs /usr/share/doc/${PF}/programs - dosym /usr/share/EMBOSS/doc/tutorials /usr/share/doc/${PF}/tutorials -} diff --git a/app-sci/emboss/emboss-2.9.0.ebuild b/app-sci/emboss/emboss-2.9.0.ebuild index 56c0272c57f1..a27a8494d1c2 100644 --- a/app-sci/emboss/emboss-2.9.0.ebuild +++ b/app-sci/emboss/emboss-2.9.0.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2004 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/app-sci/emboss/emboss-2.9.0.ebuild,v 1.3 2004/07/21 07:27:09 dholm Exp $ +# $Header: /var/cvsroot/gentoo-x86/app-sci/emboss/emboss-2.9.0.ebuild,v 1.4 2004/11/01 01:28:06 ribosome Exp $ DESCRIPTION="The European Molecular Biology Open Software Suite: a sequence analysis package." HOMEPAGE="http://emboss.sourceforge.net/" @@ -8,7 +8,7 @@ SRC_URI="ftp://ftp.uk.embnet.org/pub/EMBOSS/EMBOSS-${PV}.tar.gz" LICENSE="GPL-2 LGPL-2" SLOT="0" -KEYWORDS="~x86 ~ppc" +KEYWORDS="x86 ~ppc" IUSE="X png no-biodata" DEPEND="X? ( virtual/x11 ) diff --git a/app-sci/emboss/files/digest-emboss-2.8.0-r3 b/app-sci/emboss/files/digest-emboss-2.8.0-r3 deleted file mode 100644 index 80470321af64..000000000000 --- a/app-sci/emboss/files/digest-emboss-2.8.0-r3 +++ /dev/null @@ -1 +0,0 @@ -MD5 5692e52632546dfe4103b51dd1eaa3c3 EMBOSS-2.8.0.tar.gz 14024961 -- cgit v1.2.3-65-gdbad