From e9427f8954a1efb68fa1c95e9e111f226e9500a1 Mon Sep 17 00:00:00 2001
From: "Anna (cybertailor) Vyalkova" <cyber+gentoo@sysrq.in>
Date: Tue, 9 Jul 2024 20:47:57 +0500
Subject: sci-biology/cmdock: drop 0.2.0-r0

Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
---
 sci-biology/cmdock/cmdock-0.2.0.ebuild | 112 ---------------------------------
 1 file changed, 112 deletions(-)
 delete mode 100644 sci-biology/cmdock/cmdock-0.2.0.ebuild

diff --git a/sci-biology/cmdock/cmdock-0.2.0.ebuild b/sci-biology/cmdock/cmdock-0.2.0.ebuild
deleted file mode 100644
index 3d1c2f0359..0000000000
--- a/sci-biology/cmdock/cmdock-0.2.0.ebuild
+++ /dev/null
@@ -1,112 +0,0 @@
-# Copyright 2021-2024 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{10..12} )
-BOINC_APP_OPTIONAL="true"
-inherit boinc-app flag-o-matic meson optfeature python-any-r1
-
-DESCRIPTION="Program for docking ligands to proteins and nucleic acids"
-HOMEPAGE="https://gitlab.com/Jukic/cmdock"
-SRC_URI="https://gitlab.com/Jukic/${PN}/-/archive/v${PV}/${PN}-v${PV}.tar.bz2"
-S="${WORKDIR}/${PN}-v${PV}"
-
-LICENSE="LGPL-3 ZLIB"
-SLOT="0/${PV}"
-KEYWORDS="~amd64"
-IUSE="apidoc boinc cpu_flags_x86_sse2 doc test"
-RESTRICT="!test? ( test )"
-
-RDEPEND="
-	boinc? ( sci-misc/boinc-wrapper )
-"
-DEPEND="
-	dev-cpp/eigen:3
-	dev-cpp/indicators
-	>=dev-cpp/pcg-cpp-0.98.1_p20210406-r1
-	dev-libs/cxxopts
-"
-BDEPEND="
-	apidoc? (
-		app-text/doxygen
-		dev-texlive/texlive-fontutils
-	)
-	doc? (
-		$(python_gen_any_dep '
-			dev-python/insipid-sphinx-theme[${PYTHON_USEDEP}]
-			dev-python/sphinx[${PYTHON_USEDEP}]
-		')
-	)
-	test? ( ${PYTHON_DEPS} )
-"
-
-DOCS=( README.md changelog.md )
-
-BOINC_MASTER_URL="https://www.sidock.si/sidock/"
-BOINC_INVITATION_CODE="Crunch_4Science"
-BOINC_APP_HELPTEXT=\
-"The easiest way to do something useful with this application
-is to attach it to SiDock@home BOINC project."
-
-INSTALL_PREFIX="${EPREFIX}/opt/${P}"
-
-python_check_deps() {
-	use doc || return 0
-
-	python_has_version "dev-python/sphinx[${PYTHON_USEDEP}]" &&
-	python_has_version "dev-python/insipid-sphinx-theme[${PYTHON_USEDEP}]"
-}
-
-foreach_wrapper_job() {
-	sed -e "s:@PREFIX@:${INSTALL_PREFIX}:g" -i "${1}" || die
-}
-
-src_prepare() {
-	default
-	python_fix_shebang "${S}"/bin
-}
-
-src_configure() {
-	# very weird directory layout
-	local emesonargs=(
-		--prefix="${INSTALL_PREFIX}"
-		$(meson_use apidoc)
-		$(meson_use doc)
-		$(meson_use test tests)
-		-Ddocdir="${EPREFIX}"/usr/share/doc/${PF}
-	)
-	meson_src_configure
-
-	use cpu_flags_x86_sse2 || append-cppflags "-DBUNDLE_NO_SSE"
-}
-
-src_install() {
-	meson_src_install
-	python_optimize "${D}${INSTALL_PREFIX}"/bin
-
-	if use boinc; then
-		doappinfo "${FILESDIR}"/app_info_${PV}.xml
-		dowrapper cmdock-l
-
-		# install cmdock executable
-		exeinto "$(get_project_root)"
-		exeopts --owner root --group boinc
-		newexe "${D}${INSTALL_PREFIX}"/bin/cmdock cmdock-${PV}
-
-		# install a blank file
-		touch "${T}"/docking_out || die
-		insinto "$(get_project_root)"
-		insopts --owner root --group boinc
-		doins "${T}"/docking_out
-	fi
-}
-
-pkg_postinst() {
-	optfeature "sdtether.py and sdrmsd.py scripts" "dev-python/numpy sci-chemistry/openbabel[python]"
-	use boinc && boinc-app_pkg_postinst
-}
-
-pkg_postrm() {
-	use boinc && boinc-app_pkg_postrm
-}
-- 
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