diff options
Diffstat (limited to 'metadata/md5-cache/sci-chemistry')
36 files changed, 72 insertions, 72 deletions
diff --git a/metadata/md5-cache/sci-chemistry/apbs-1.4.1-r2 b/metadata/md5-cache/sci-chemistry/apbs-1.4.1-r2 index d4283cb723cc..c46864cc01bf 100644 --- a/metadata/md5-cache/sci-chemistry/apbs-1.4.1-r2 +++ b/metadata/md5-cache/sci-chemistry/apbs-1.4.1-r2 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=virtual/pkgconfig doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.5.2 >=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] +DEPEND=virtual/pkgconfig doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.6.3 >=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] DESCRIPTION=Evaluation of electrostatic properties of nanoscale biomolecular systems EAPI=5 HOMEPAGE=http://www.poissonboltzmann.org/apbs/ @@ -11,5 +11,5 @@ REQUIRED_USE=iapbs? ( fetk ) mpi? ( !python ) python? ( tools fetk iapbs python_ SLOT=0 SRC_URI=https://github.com/Electrostatics/apbs-pdb2pqr/archive/74fcb8676de69ed04ddab8976a8b05a6caaf4d65.zip -> apbs-1.4.1.zip _eclass_exported_funcs=pkg_setup:python-single-r1 src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 distutils-r1 f1707af2d2ad4cf700a9e690de6ed855 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 distutils-r1 f1707af2d2ad4cf700a9e690de6ed855 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 _md5_=dd18e228fda67e182c3cc0b96e4959cf diff --git a/metadata/md5-cache/sci-chemistry/avogadro-1.0.3-r2 b/metadata/md5-cache/sci-chemistry/avogadro-1.0.3-r2 index cac9ce2fa365..503b6e38205b 100644 --- a/metadata/md5-cache/sci-chemistry/avogadro-1.0.3-r2 +++ b/metadata/md5-cache/sci-chemistry/avogadro-1.0.3-r2 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=>=sci-chemistry/openbabel-2.2.3 >=dev-qt/qtgui-4.5.3:4 >=dev-qt/qtopengl-4.5.3:4 x11-libs/gl2ps glsl? ( >=media-libs/glew-1.5.0 ) python? ( >=dev-libs/boost-1.35.0-r5[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/sip[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] ) dev-cpp/eigen:2 sys-devel/make >=dev-util/cmake-3.5.2 +DEPEND=>=sci-chemistry/openbabel-2.2.3 >=dev-qt/qtgui-4.5.3:4 >=dev-qt/qtopengl-4.5.3:4 x11-libs/gl2ps glsl? ( >=media-libs/glew-1.5.0 ) python? ( >=dev-libs/boost-1.35.0-r5[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/sip[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] ) dev-cpp/eigen:2 sys-devel/make >=dev-util/cmake-3.6.3 DESCRIPTION=Advanced molecular editor that uses Qt4 and OpenGL EAPI=5 HOMEPAGE=http://avogadro.openmolecules.net/ @@ -10,5 +10,5 @@ RDEPEND=>=sci-chemistry/openbabel-2.2.3 >=dev-qt/qtgui-4.5.3:4 >=dev-qt/qtopengl SLOT=0 SRC_URI=mirror://sourceforge/avogadro/avogadro-1.0.3.tar.bz2 _eclass_exported_funcs=pkg_setup:- src_prepare:cmake-utils src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=df8e12a7f6c03ca9ba4079dd166143b4 diff --git a/metadata/md5-cache/sci-chemistry/avogadro-1.1.0 b/metadata/md5-cache/sci-chemistry/avogadro-1.1.0 index f4d117ab6151..58a90d28a427 100644 --- a/metadata/md5-cache/sci-chemistry/avogadro-1.1.0 +++ b/metadata/md5-cache/sci-chemistry/avogadro-1.1.0 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=>=sci-chemistry/openbabel-2.3.0 >=dev-qt/qtgui-4.5.3:4 >=dev-qt/qtopengl-4.5.3:4 x11-libs/gl2ps glsl? ( >=media-libs/glew-1.5.0 ) python? ( >=dev-libs/boost-1.35.0-r5[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/sip[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] ) dev-cpp/eigen:2 sys-devel/make >=dev-util/cmake-3.5.2 +DEPEND=>=sci-chemistry/openbabel-2.3.0 >=dev-qt/qtgui-4.5.3:4 >=dev-qt/qtopengl-4.5.3:4 x11-libs/gl2ps glsl? ( >=media-libs/glew-1.5.0 ) python? ( >=dev-libs/boost-1.35.0-r5[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/sip[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] ) dev-cpp/eigen:2 sys-devel/make >=dev-util/cmake-3.6.3 DESCRIPTION=Advanced molecular editor that uses Qt4 and OpenGL EAPI=5 HOMEPAGE=http://avogadro.openmolecules.net/ @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=mirror://sourceforge/avogadro/avogadro-1.1.0.tar.bz2 _eclass_exported_funcs=pkg_setup:- src_prepare:cmake-utils src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=2c488f1f019212b80afc02138200abda diff --git a/metadata/md5-cache/sci-chemistry/avogadro-1.1.1 b/metadata/md5-cache/sci-chemistry/avogadro-1.1.1 index bb460c84cbaf..0c76d3f68d42 100644 --- a/metadata/md5-cache/sci-chemistry/avogadro-1.1.1 +++ b/metadata/md5-cache/sci-chemistry/avogadro-1.1.1 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=>=sci-chemistry/openbabel-2.3.0 >=dev-qt/qtgui-4.8.5:4 >=dev-qt/qtopengl-4.8.5:4 x11-libs/gl2ps glsl? ( >=media-libs/glew-1.5.0 ) python? ( >=dev-libs/boost-1.35.0-r5[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/sip[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] ) virtual/pkgconfig dev-cpp/eigen sys-devel/make >=dev-util/cmake-3.5.2 +DEPEND=>=sci-chemistry/openbabel-2.3.0 >=dev-qt/qtgui-4.8.5:4 >=dev-qt/qtopengl-4.8.5:4 x11-libs/gl2ps glsl? ( >=media-libs/glew-1.5.0 ) python? ( >=dev-libs/boost-1.35.0-r5[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/numpy[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/sip[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] ) virtual/pkgconfig dev-cpp/eigen sys-devel/make >=dev-util/cmake-3.6.3 DESCRIPTION=Advanced molecular editor that uses Qt4 and OpenGL EAPI=6 HOMEPAGE=http://avogadro.openmolecules.net/ @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=mirror://sourceforge/project/avogadro/avogadro/1.1.1/avogadro-1.1.1.tar.bz2 _eclass_exported_funcs=pkg_setup:- src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=a9c12dc43001dc89acffff974fab6a7b diff --git a/metadata/md5-cache/sci-chemistry/avogadro2-0.7.2 b/metadata/md5-cache/sci-chemistry/avogadro2-0.7.2 index 6326ca571875..e962557e3136 100644 --- a/metadata/md5-cache/sci-chemistry/avogadro2-0.7.2 +++ b/metadata/md5-cache/sci-chemistry/avogadro2-0.7.2 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare test -DEPEND=sys-devel/make >=dev-util/cmake-3.5.2 +DEPEND=sys-devel/make >=dev-util/cmake-3.6.3 DESCRIPTION=Advanced molecule editor and visualizer 2 EAPI=5 HOMEPAGE=http://www.openchemistry.org/ @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=mirror://sourceforge/project/avogadro/avogadro2/0.7.2/avogadroapp-0.7.2.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=0f8ba51ddb5a3ecd089036af2ae1e278 diff --git a/metadata/md5-cache/sci-chemistry/avogadro2-0.8.0 b/metadata/md5-cache/sci-chemistry/avogadro2-0.8.0 index 2010dc51f07f..fc3bd383e5ea 100644 --- a/metadata/md5-cache/sci-chemistry/avogadro2-0.8.0 +++ b/metadata/md5-cache/sci-chemistry/avogadro2-0.8.0 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare test -DEPEND=>=dev-cpp/eigen-3.2.0-r1 test? ( dev-qt/qttest:5 ) sys-devel/make >=dev-util/cmake-3.5.2 +DEPEND=>=dev-cpp/eigen-3.2.0-r1 test? ( dev-qt/qttest:5 ) sys-devel/make >=dev-util/cmake-3.6.3 DESCRIPTION=Advanced molecule editor and visualizer 2 EAPI=5 HOMEPAGE=http://www.openchemistry.org/ @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=mirror://sourceforge/project/avogadro/avogadro2/0.8.0/avogadroapp-0.8.0.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=1a62abf4934b34e9584a8c0dc26724ce diff --git a/metadata/md5-cache/sci-chemistry/ball-1.4.2-r1 b/metadata/md5-cache/sci-chemistry/ball-1.4.2-r1 index 4a7225354985..7b79a823cf39 100644 --- a/metadata/md5-cache/sci-chemistry/ball-1.4.2-r1 +++ b/metadata/md5-cache/sci-chemistry/ball-1.4.2-r1 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=dev-cpp/eigen:3 dev-libs/boost:= dev-qt/qtcore:4 dev-qt/qtgui:4 dev-qt/qtopengl:4 dev-qt/qttest:4 dev-qt/qtwebkit:4 media-libs/glew sci-libs/fftw:3.0[threads?] sci-libs/gsl sci-libs/libsvm sci-mathematics/lpsolve virtual/opengl x11-libs/libX11 cuda? ( dev-util/nvidia-cuda-toolkit ) mpi? ( virtual/mpi ) python? ( >=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] ) sql? ( dev-qt/qtsql:4 ) dev-python/sip sys-devel/bison virtual/yacc sys-devel/make >=dev-util/cmake-3.5.2 +DEPEND=dev-cpp/eigen:3 dev-libs/boost:= dev-qt/qtcore:4 dev-qt/qtgui:4 dev-qt/qtopengl:4 dev-qt/qttest:4 dev-qt/qtwebkit:4 media-libs/glew sci-libs/fftw:3.0[threads?] sci-libs/gsl sci-libs/libsvm sci-mathematics/lpsolve virtual/opengl x11-libs/libX11 cuda? ( dev-util/nvidia-cuda-toolkit ) mpi? ( virtual/mpi ) python? ( >=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] ) sql? ( dev-qt/qtsql:4 ) dev-python/sip sys-devel/bison virtual/yacc sys-devel/make >=dev-util/cmake-3.6.3 DESCRIPTION=Biochemical Algorithms Library EAPI=6 HOMEPAGE=http://www.ball-project.org/ @@ -11,5 +11,5 @@ REQUIRED_USE=python? ( python_targets_python2_7 ) SLOT=0 SRC_URI=http://www.ball-project.org/Downloads/v1.4.2/BALL-1.4.2.tar.xz _eclass_exported_funcs=pkg_setup:- src_prepare:cmake-utils src_configure:- src_compile:- src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=a3001dd72dd19a5da30e32874ad6c2dc diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2016 b/metadata/md5-cache/sci-chemistry/gromacs-2016 index 38700467a824..283ed9e193f1 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2016 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2016 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare pretend test unpack -DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.5.2 +DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.6.3 DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=6 HOMEPAGE=http://www.gromacs.org/ @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) SLOT=0/2016 SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-2016.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-2016.tar.gz ) _eclass_exported_funcs=pkg_pretend:- pkg_postinst:- src_unpack:- src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 _md5_=5c36eab4cd25b2d44f68db1fc7c17c60 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2016.1 b/metadata/md5-cache/sci-chemistry/gromacs-2016.1 index 523a30c9dbf6..aa448dfae555 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2016.1 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2016.1 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare pretend test unpack -DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-libs/tinyxml2 dev-util/ninja >=dev-util/cmake-3.5.2 +DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-libs/tinyxml2 dev-util/ninja >=dev-util/cmake-3.6.3 DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=6 HOMEPAGE=http://www.gromacs.org/ @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) SLOT=0/2016.1 SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-2016.1.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-2016.1.tar.gz ) _eclass_exported_funcs=pkg_pretend:- pkg_postinst:- src_unpack:- src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 _md5_=f6001f941b69a294caa90c7a898a26c2 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2016.9999 b/metadata/md5-cache/sci-chemistry/gromacs-2016.9999 index 1fc63803ab0a..61c463edd997 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-2016.9999 +++ b/metadata/md5-cache/sci-chemistry/gromacs-2016.9999 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare pretend test unpack -DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-libs/tinyxml2 dev-util/ninja >=dev-util/cmake-3.5.2 >=dev-vcs/git-1.8.2.1 +DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-libs/tinyxml2 dev-util/ninja >=dev-util/cmake-3.6.3 >=dev-vcs/git-1.8.2.1 DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=6 HOMEPAGE=http://www.gromacs.org/ @@ -9,5 +9,5 @@ RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/bl REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack ) SLOT=0/2016.9999 _eclass_exported_funcs=pkg_pretend:- pkg_postinst:- src_unpack:- src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 _md5_=f6001f941b69a294caa90c7a898a26c2 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-4.6.9999 b/metadata/md5-cache/sci-chemistry/gromacs-4.6.9999 index 9fc565f35251..2ca974a38180 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-4.6.9999 +++ b/metadata/md5-cache/sci-chemistry/gromacs-4.6.9999 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare pretend test unpack -DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) gsl? ( sci-libs/gsl ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick sys-apps/coreutils ) doc? ( app-doc/doxygen ) dev-util/ninja >=dev-util/cmake-3.5.2 >=dev-vcs/git-1.8.2.1 +DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) gsl? ( sci-libs/gsl ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick sys-apps/coreutils ) doc? ( app-doc/doxygen ) dev-util/ninja >=dev-util/cmake-3.6.3 >=dev-vcs/git-1.8.2.1 DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=6 HOMEPAGE=http://www.gromacs.org/ @@ -9,5 +9,5 @@ RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/bl REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack ) SLOT=0/4.6.9999 _eclass_exported_funcs=pkg_pretend:- pkg_postinst:- src_unpack:- src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=2f57a4d069640e102c241778e1f048e0 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-5.0.4 b/metadata/md5-cache/sci-chemistry/gromacs-5.0.4 index 0df678100003..f53ce7f88992 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-5.0.4 +++ b/metadata/md5-cache/sci-chemistry/gromacs-5.0.4 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare pretend test unpack -DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.5.2 +DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.6.3 DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=5 HOMEPAGE=http://www.gromacs.org/ @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) SLOT=0/5.0.4 SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-5.0.4.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-5.0.4.tar.gz ) _eclass_exported_funcs=pkg_pretend:- pkg_postinst:- src_unpack:- src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo df3fc8fdaf5a519e7d48c83e7592c95f toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo df3fc8fdaf5a519e7d48c83e7592c95f toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=cf4730a847d69d4343843a955066ff80 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-5.0.9999 b/metadata/md5-cache/sci-chemistry/gromacs-5.0.9999 index 7b783bb0eae2..580466f0c46a 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-5.0.9999 +++ b/metadata/md5-cache/sci-chemistry/gromacs-5.0.9999 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare pretend test unpack -DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.5.2 >=dev-vcs/git-1.8.2.1 +DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.6.3 >=dev-vcs/git-1.8.2.1 DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=6 HOMEPAGE=http://www.gromacs.org/ @@ -9,5 +9,5 @@ RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/bl REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack ) SLOT=0/5.0.9999 _eclass_exported_funcs=pkg_pretend:- pkg_postinst:- src_unpack:- src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=4b5109daa08a7832988a2072dcced389 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-5.1.3 b/metadata/md5-cache/sci-chemistry/gromacs-5.1.3 index 5fcd75845a72..39156f59b4a5 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-5.1.3 +++ b/metadata/md5-cache/sci-chemistry/gromacs-5.1.3 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare pretend test unpack -DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.5.2 +DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.6.3 DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=6 HOMEPAGE=http://www.gromacs.org/ @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) SLOT=0/5.1.3 SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-5.1.3.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-5.1.3.tar.gz ) _eclass_exported_funcs=pkg_pretend:- pkg_postinst:- src_unpack:- src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=b570080ccda5e6060f18a29c3b60acf2 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-5.1.9999 b/metadata/md5-cache/sci-chemistry/gromacs-5.1.9999 index ba5ea51e749e..7640825bca20 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-5.1.9999 +++ b/metadata/md5-cache/sci-chemistry/gromacs-5.1.9999 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare pretend test unpack -DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.5.2 >=dev-vcs/git-1.8.2.1 +DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) boost? ( >=dev-libs/boost-1.55 ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.6.3 >=dev-vcs/git-1.8.2.1 DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=6 HOMEPAGE=http://www.gromacs.org/ @@ -9,5 +9,5 @@ RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/bl REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack ) SLOT=0/5.1.9999 _eclass_exported_funcs=pkg_pretend:- pkg_postinst:- src_unpack:- src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=b570080ccda5e6060f18a29c3b60acf2 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-9999 b/metadata/md5-cache/sci-chemistry/gromacs-9999 index 10658c074877..328d875c2862 100644 --- a/metadata/md5-cache/sci-chemistry/gromacs-9999 +++ b/metadata/md5-cache/sci-chemistry/gromacs-9999 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare pretend test unpack -DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.5.2 >=dev-vcs/git-1.8.2.1 +DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.6.3 >=dev-vcs/git-1.8.2.1 DESCRIPTION=The ultimate molecular dynamics simulation package EAPI=6 HOMEPAGE=http://www.gromacs.org/ @@ -9,5 +9,5 @@ RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/bl REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) mkl? ( !blas !fftw !lapack ) SLOT=0/9999 _eclass_exported_funcs=pkg_pretend:- pkg_postinst:- src_unpack:- src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 cuda f150e667cc5826799d86be0fff518252 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 _md5_=d8308e5abd776d1fa3aa495eeade7eaf diff --git a/metadata/md5-cache/sci-chemistry/massxpert-3.4.0 b/metadata/md5-cache/sci-chemistry/massxpert-3.4.0 index af60c0537842..5e37fb09083f 100644 --- a/metadata/md5-cache/sci-chemistry/massxpert-3.4.0 +++ b/metadata/md5-cache/sci-chemistry/massxpert-3.4.0 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare test -DEPEND=doc? ( virtual/latex-base ) sys-devel/make >=dev-util/cmake-3.5.2 +DEPEND=doc? ( virtual/latex-base ) sys-devel/make >=dev-util/cmake-3.6.3 DESCRIPTION=Software suite to predict/analyze mass spectrometric data on (bio)polymers EAPI=5 HOMEPAGE=http://massxpert.org @@ -10,5 +10,5 @@ RDEPEND=dev-qt/qtsvg:4[debug?] SLOT=0 SRC_URI=http://download.tuxfamily.org/massxpert/source/massxpert-3.4.0.tar.bz2 _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=9a1ccc6c0a2d48b2d3b9820dc3f3baef diff --git a/metadata/md5-cache/sci-chemistry/mm-align-20120321 b/metadata/md5-cache/sci-chemistry/mm-align-20120321 index f6be097eb87b..af0855bf838d 100644 --- a/metadata/md5-cache/sci-chemistry/mm-align-20120321 +++ b/metadata/md5-cache/sci-chemistry/mm-align-20120321 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=sys-devel/make >=dev-util/cmake-3.5.2 virtual/fortran +DEPEND=sys-devel/make >=dev-util/cmake-3.6.3 virtual/fortran DESCRIPTION=Protein Complex Structural Alignment EAPI=4 HOMEPAGE=http://zhanglab.ccmb.med.umich.edu/MM-align/ @@ -9,5 +9,5 @@ RDEPEND=virtual/fortran SLOT=0 SRC_URI=https://dev.gentoo.org/~jlec/distfiles/MM-align-20120321.tar.xz _eclass_exported_funcs=pkg_setup:fortran-2 src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=3a9cefae7b17cca25fe1e37d636f9fb1 diff --git a/metadata/md5-cache/sci-chemistry/molequeue-0.7.1 b/metadata/md5-cache/sci-chemistry/molequeue-0.7.1 index 4b18a26c29f3..71774ca82676 100644 --- a/metadata/md5-cache/sci-chemistry/molequeue-0.7.1 +++ b/metadata/md5-cache/sci-chemistry/molequeue-0.7.1 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=>=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-qt/qtcore:4 dev-qt/qtgui:4 zeromq? ( net-libs/cppzmq:0= ) doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.5.2 test? ( !prefix? ( x11-base/xorg-server[xvfb] ) x11-apps/xhost ) +DEPEND=>=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-qt/qtcore:4 dev-qt/qtgui:4 zeromq? ( net-libs/cppzmq:0= ) doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.6.3 test? ( !prefix? ( x11-base/xorg-server[xvfb] ) x11-apps/xhost ) DESCRIPTION=Abstract, manage and coordinate execution of tasks EAPI=5 HOMEPAGE=http://www.openchemistry.org/OpenChemistry/project/molequeue.html @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 server? ( client ) test? ( server ) SLOT=0 SRC_URI=mirror://sourceforge/project/molequeue/molequeue/0.7.1/molequeue-0.7.1.tar.gz _eclass_exported_funcs=pkg_setup:python-single-r1 src_prepare:cmake-utils src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c virtualx 86c9305a59b3e0459e7fbef3a5f30b96 +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c virtualx 86c9305a59b3e0459e7fbef3a5f30b96 _md5_=12122741f8cf1880dc87c05342bf15bb diff --git a/metadata/md5-cache/sci-chemistry/molequeue-0.8.0 b/metadata/md5-cache/sci-chemistry/molequeue-0.8.0 index 6e310b367a74..38ddd7d8a200 100644 --- a/metadata/md5-cache/sci-chemistry/molequeue-0.8.0 +++ b/metadata/md5-cache/sci-chemistry/molequeue-0.8.0 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=>=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-qt/qtcore:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 zeromq? ( net-libs/cppzmq:0= ) doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.5.2 test? ( !prefix? ( x11-base/xorg-server[xvfb] ) x11-apps/xhost ) +DEPEND=>=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-qt/qtcore:5 dev-qt/qtnetwork:5 dev-qt/qtwidgets:5 zeromq? ( net-libs/cppzmq:0= ) doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.6.3 test? ( !prefix? ( x11-base/xorg-server[xvfb] ) x11-apps/xhost ) DESCRIPTION=Abstract, manage and coordinate execution of tasks EAPI=5 HOMEPAGE=http://www.openchemistry.org/OpenChemistry/project/molequeue.html @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 server? ( client ) test? ( server ) SLOT=0 SRC_URI=https://github.com/OpenChemistry/molequeue/archive/0.8.0.tar.gz -> molequeue-0.8.0.tar.gz _eclass_exported_funcs=pkg_setup:python-single-r1 src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c virtualx 86c9305a59b3e0459e7fbef3a5f30b96 +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-single-r1 19a74c6b5c191723a997dc7e0cc6bb09 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c virtualx 86c9305a59b3e0459e7fbef3a5f30b96 _md5_=35777a2ec30bbf08bee059738d23c1e1 diff --git a/metadata/md5-cache/sci-chemistry/molsketch-0.2.0-r1 b/metadata/md5-cache/sci-chemistry/molsketch-0.2.0-r1 index 7cfe0f604425..1d634196a0f6 100644 --- a/metadata/md5-cache/sci-chemistry/molsketch-0.2.0-r1 +++ b/metadata/md5-cache/sci-chemistry/molsketch-0.2.0-r1 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare test -DEPEND=>=sci-chemistry/openbabel-2.2 dev-qt/qtcore:4 dev-qt/qtgui:4 dev-qt/qttest:4 >=dev-qt/qthelp-4.7.0:4[compat] sys-devel/make >=dev-util/cmake-3.5.2 +DEPEND=>=sci-chemistry/openbabel-2.2 dev-qt/qtcore:4 dev-qt/qtgui:4 dev-qt/qttest:4 >=dev-qt/qthelp-4.7.0:4[compat] sys-devel/make >=dev-util/cmake-3.6.3 DESCRIPTION=A drawing tool for 2D molecular structures EAPI=5 HOMEPAGE=http://molsketch.sourceforge.net/ @@ -9,5 +9,5 @@ RDEPEND=>=sci-chemistry/openbabel-2.2 dev-qt/qtcore:4 dev-qt/qtgui:4 dev-qt/qtte SLOT=0 SRC_URI=mirror://sourceforge/molsketch/Molsketch-0.2.0-Source.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=32785a6b5aec207f4e3b3be34c7b3956 diff --git a/metadata/md5-cache/sci-chemistry/molsketch-0.3.0 b/metadata/md5-cache/sci-chemistry/molsketch-0.3.0 index 42bb3a891e30..262a4b0c557c 100644 --- a/metadata/md5-cache/sci-chemistry/molsketch-0.3.0 +++ b/metadata/md5-cache/sci-chemistry/molsketch-0.3.0 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare test -DEPEND=>=sci-chemistry/openbabel-2.2 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtprintsupport:5 dev-qt/qtsvg:5 dev-qt/qtwidgets:5 dev-util/ninja >=dev-util/cmake-3.5.2 +DEPEND=>=sci-chemistry/openbabel-2.2 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtprintsupport:5 dev-qt/qtsvg:5 dev-qt/qtwidgets:5 dev-util/ninja >=dev-util/cmake-3.6.3 DESCRIPTION=A drawing tool for 2D molecular structures EAPI=5 HOMEPAGE=http://molsketch.sourceforge.net/ @@ -10,5 +10,5 @@ RDEPEND=>=sci-chemistry/openbabel-2.2 dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtpr SLOT=0 SRC_URI=mirror://sourceforge/project/molsketch/Molsketch/Lithium%200.3.0/Molsketch-0.3.0-src.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b qmake-utils 0a242e7177789b0028b4045f336dd4db toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b qmake-utils 0a242e7177789b0028b4045f336dd4db toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=c088436e0bda31992abc0dc936019843 diff --git a/metadata/md5-cache/sci-chemistry/mongochem-0.7.0-r1 b/metadata/md5-cache/sci-chemistry/mongochem-0.7.0-r1 index d8fd858aac5f..4446fce2b13d 100644 --- a/metadata/md5-cache/sci-chemistry/mongochem-0.7.0-r1 +++ b/metadata/md5-cache/sci-chemistry/mongochem-0.7.0-r1 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare test unpack -DEPEND=dev-libs/boost[threads] dev-libs/mongo-cxx-driver sci-libs/avogadrolibs[qt4] sci-libs/chemkit sci-libs/vtk[qt4,rendering] sci-chemistry/molequeue dev-util/ninja >=dev-util/cmake-3.5.2 +DEPEND=dev-libs/boost[threads] dev-libs/mongo-cxx-driver sci-libs/avogadrolibs[qt4] sci-libs/chemkit sci-libs/vtk[qt4,rendering] sci-chemistry/molequeue dev-util/ninja >=dev-util/cmake-3.6.3 DESCRIPTION=Application for managing large collections of chemical data EAPI=5 HOMEPAGE=http://www.openchemistry.org/ @@ -9,5 +9,5 @@ RDEPEND=dev-libs/boost[threads] dev-libs/mongo-cxx-driver sci-libs/avogadrolibs[ SLOT=0 SRC_URI=https://github.com/OpenChemistry/mongochem/archive/df36ebce92024dd4fd1c70eb37eb84e4c51120ff.tar.gz -> mongochem-0.7.0.tar.gz _eclass_exported_funcs=src_unpack:vcs-snapshot src_prepare:cmake-utils src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 vcs-snapshot 2b65ecb2d0f91e4322c2ac8d673993bd versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 vcs-snapshot 2b65ecb2d0f91e4322c2ac8d673993bd versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=68b50d0f22a73986792a09a2701732ac diff --git a/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1 b/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1 index 87b570ff37cf..886dac88bdba 100644 --- a/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1 +++ b/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare setup test -DEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sci-libs/inchi sys-libs/zlib wxwidgets? ( x11-libs/wxGTK:3.0[X] ) >=dev-util/cmake-2.4.8 doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.5.2 +DEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sci-libs/inchi sys-libs/zlib wxwidgets? ( x11-libs/wxGTK:3.0[X] ) >=dev-util/cmake-2.4.8 doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.6.3 DESCRIPTION=Interconverts file formats used in molecular modeling EAPI=5 HOMEPAGE=http://openbabel.sourceforge.net/ @@ -10,5 +10,5 @@ RDEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sci-libs/inchi sys-libs/zlib wxwidget SLOT=0 SRC_URI=mirror://sourceforge/openbabel/openbabel-2.3.2.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:- src_prepare:- src_configure:- src_compile:cmake-utils src_test:- src_install:- -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c wxwidgets 9b34ce3ca77f4e418e8fd9951c4c1cb1 +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c wxwidgets 9b34ce3ca77f4e418e8fd9951c4c1cb1 _md5_=0dcfd2121f130448d84a8346b73ba58d diff --git a/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2 b/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2 index 43b2fb33d368..7f67d7ec625c 100644 --- a/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2 +++ b/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare test unpack -DEPEND=dev-lang/perl:= ~sci-chemistry/openbabel-2.3.2 >=dev-util/cmake-2.4.8 >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.5.2 dev-lang/perl:=[-build(-)] +DEPEND=dev-lang/perl:= ~sci-chemistry/openbabel-2.3.2 >=dev-util/cmake-2.4.8 >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.6.3 dev-lang/perl:=[-build(-)] DESCRIPTION=Perl bindings for OpenBabel EAPI=5 HOMEPAGE=http://openbabel.sourceforge.net/ @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl:= ~sci-chemistry/openbabel-2.3.2 dev-lang/perl:=[-build(-) SLOT=0 SRC_URI=mirror://sourceforge/openbabel/openbabel-2.3.2.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b perl-functions aac50de73be0a80ebe780e0b20850130 perl-module f6549146ea31a902e20b5f2e6f244358 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b perl-functions aac50de73be0a80ebe780e0b20850130 perl-module f6549146ea31a902e20b5f2e6f244358 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=2ef8db873df9168f1a055636ad8b0e99 diff --git a/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2 b/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2 index a7ec4aaf921c..cd8e485f1041 100644 --- a/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2 +++ b/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare test -DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-)] ~sci-chemistry/openbabel-2.3.2 sys-libs/zlib >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.5.2 +DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-)] ~sci-chemistry/openbabel-2.3.2 sys-libs/zlib >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.6.3 DESCRIPTION=Python bindings for OpenBabel (including Pybel) EAPI=5 HOMEPAGE=http://openbabel.sourceforge.net/ @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 ) SLOT=0 SRC_URI=mirror://sourceforge/openbabel/openbabel-2.3.2.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-r1 dcd61d7a5c283f18cfe763552b09eb88 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b python-r1 dcd61d7a5c283f18cfe763552b09eb88 python-utils-r1 d275302cd06aedef2ba08f81f3104206 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=4c14b001d02863858f7070d0a59b2362 diff --git a/metadata/md5-cache/sci-chemistry/pdbcat-1.3 b/metadata/md5-cache/sci-chemistry/pdbcat-1.3 index b74b0a01a334..1f83de40d02a 100644 --- a/metadata/md5-cache/sci-chemistry/pdbcat-1.3 +++ b/metadata/md5-cache/sci-chemistry/pdbcat-1.3 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare test -DEPEND=sys-devel/make >=dev-util/cmake-3.5.2 +DEPEND=sys-devel/make >=dev-util/cmake-3.6.3 DESCRIPTION=Manipulate and process PDB files using commonly available tools such as Perl, awk, etc EAPI=4 HOMEPAGE=http://www.ks.uiuc.edu/Development/MDTools/pdbcat/ @@ -8,5 +8,5 @@ LICENSE=free-noncomm SLOT=0 SRC_URI=http://www.ks.uiuc.edu/Development/MDTools/pdbcat/files/pdbcat-1.3.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=f349af329681254458efdfdc91c5cc16 diff --git a/metadata/md5-cache/sci-chemistry/pdbmat-3.89 b/metadata/md5-cache/sci-chemistry/pdbmat-3.89 index 284b40c58673..07e398310050 100644 --- a/metadata/md5-cache/sci-chemistry/pdbmat-3.89 +++ b/metadata/md5-cache/sci-chemistry/pdbmat-3.89 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=sys-devel/make >=dev-util/cmake-3.5.2 virtual/fortran +DEPEND=sys-devel/make >=dev-util/cmake-3.6.3 virtual/fortran DESCRIPTION=Calculate Tirion's model from pdb structures EAPI=4 HOMEPAGE=http://ecole.modelisation.free.fr/modes.html @@ -10,5 +10,5 @@ RDEPEND=virtual/fortran SLOT=0 SRC_URI=http://ecole.modelisation.free.fr/enm2011.tar.gz -> pdbmat-3.89.tar.gz _eclass_exported_funcs=pkg_setup:fortran-2 src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=0bd8fcc0d24bb0cbd87dd6de3b72aaf3 diff --git a/metadata/md5-cache/sci-chemistry/tm-align-20140601 b/metadata/md5-cache/sci-chemistry/tm-align-20140601 index 1e607fded106..35ed67b5515c 100644 --- a/metadata/md5-cache/sci-chemistry/tm-align-20140601 +++ b/metadata/md5-cache/sci-chemistry/tm-align-20140601 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=sys-devel/make >=dev-util/cmake-3.5.2 virtual/fortran +DEPEND=sys-devel/make >=dev-util/cmake-3.6.3 virtual/fortran DESCRIPTION=Quick & Accurate Structural Alignment EAPI=5 HOMEPAGE=http://zhanglab.ccmb.med.umich.edu/TM-align/ @@ -10,5 +10,5 @@ RDEPEND=virtual/fortran SLOT=0 SRC_URI=http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools20140601.tar.gz _eclass_exported_funcs=pkg_setup:fortran-2 src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=8b2fe3e403ad281f42b77d266b154205 diff --git a/metadata/md5-cache/sci-chemistry/tm-align-20150914 b/metadata/md5-cache/sci-chemistry/tm-align-20150914 index 25be5f01d64b..32ad52f48c04 100644 --- a/metadata/md5-cache/sci-chemistry/tm-align-20150914 +++ b/metadata/md5-cache/sci-chemistry/tm-align-20150914 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare setup test -DEPEND=sys-devel/make >=dev-util/cmake-3.5.2 virtual/fortran +DEPEND=sys-devel/make >=dev-util/cmake-3.6.3 virtual/fortran DESCRIPTION=Quick & Accurate Structural Alignment EAPI=5 HOMEPAGE=http://zhanglab.ccmb.med.umich.edu/TM-align/ @@ -10,5 +10,5 @@ RDEPEND=virtual/fortran SLOT=0 SRC_URI=http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools20150914.tar.gz _eclass_exported_funcs=pkg_setup:fortran-2 src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=3aea2be52fe3e9a0f3e13184abe6c7ad diff --git a/metadata/md5-cache/sci-chemistry/votca-csg-1.4 b/metadata/md5-cache/sci-chemistry/votca-csg-1.4 index d4bf0fc86a89..7c4395d43f3f 100644 --- a/metadata/md5-cache/sci-chemistry/votca-csg-1.4 +++ b/metadata/md5-cache/sci-chemistry/votca-csg-1.4 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare test unpack -DEPEND==sci-libs/votca-tools-1.4 gromacs? ( sci-chemistry/gromacs:= ) hdf5? ( sci-libs/hdf5 ) dev-lang/perl app-shells/bash:* doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.5.2 +DEPEND==sci-libs/votca-tools-1.4 gromacs? ( sci-chemistry/gromacs:= ) hdf5? ( sci-libs/hdf5 ) dev-lang/perl app-shells/bash:* doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.6.3 DESCRIPTION=Votca coarse-graining engine EAPI=6 HOMEPAGE=http://www.votca.org @@ -11,5 +11,5 @@ RDEPEND==sci-libs/votca-tools-1.4 gromacs? ( sci-chemistry/gromacs:= ) hdf5? ( s SLOT=0 SRC_URI=https://github.com/votca/csg/archive/v1.4.tar.gz -> votca-csg-1.4.tar.gz doc? ( https://github.com/votca/csg-manual/releases/download/v1.4/votca-csg-manual-1.4.pdf ) examples? ( https://github.com/votca/csg-tutorials/archive/v1.4.tar.gz -> votca-csg-tutorials-1.4.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_unpack:- src_prepare:cmake-utils src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=b65c6eb6c77d891ddde38c39d94b3db3 diff --git a/metadata/md5-cache/sci-chemistry/votca-csg-9999 b/metadata/md5-cache/sci-chemistry/votca-csg-9999 index d24a9bd78e36..f1365efcc3a9 100644 --- a/metadata/md5-cache/sci-chemistry/votca-csg-9999 +++ b/metadata/md5-cache/sci-chemistry/votca-csg-9999 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare test unpack -DEPEND==sci-libs/votca-tools-9999 gromacs? ( sci-chemistry/gromacs:= ) hdf5? ( sci-libs/hdf5 ) dev-lang/perl app-shells/bash:* doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.5.2 >=dev-vcs/git-1.8.2.1 +DEPEND==sci-libs/votca-tools-9999 gromacs? ( sci-chemistry/gromacs:= ) hdf5? ( sci-libs/hdf5 ) dev-lang/perl app-shells/bash:* doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.6.3 >=dev-vcs/git-1.8.2.1 DESCRIPTION=Votca coarse-graining engine EAPI=6 HOMEPAGE=http://www.votca.org @@ -9,5 +9,5 @@ PDEPEND=extras? ( =sci-chemistry/votca-csgapps-9999 ) RDEPEND==sci-libs/votca-tools-9999 gromacs? ( sci-chemistry/gromacs:= ) hdf5? ( sci-libs/hdf5 ) dev-lang/perl app-shells/bash:* SLOT=0 _eclass_exported_funcs=pkg_postinst:- src_unpack:- src_prepare:cmake-utils src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=29ce469053a0744a118fddf5e4d27da6 diff --git a/metadata/md5-cache/sci-chemistry/votca-csgapps-1.4 b/metadata/md5-cache/sci-chemistry/votca-csgapps-1.4 index 64bb016bcb42..5a42fbb5bdbe 100644 --- a/metadata/md5-cache/sci-chemistry/votca-csgapps-1.4 +++ b/metadata/md5-cache/sci-chemistry/votca-csgapps-1.4 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare test -DEPEND=~sci-chemistry/votca-csg-1.4 dev-util/ninja >=dev-util/cmake-3.5.2 +DEPEND=~sci-chemistry/votca-csg-1.4 dev-util/ninja >=dev-util/cmake-3.6.3 DESCRIPTION=Extra applications for votca-csg EAPI=6 HOMEPAGE=http://www.votca.org @@ -9,5 +9,5 @@ RDEPEND=~sci-chemistry/votca-csg-1.4 SLOT=0 SRC_URI=https://github.com/votca/csgapps/archive/v1.4.tar.gz -> votca-csgapps-1.4.tar.gz _eclass_exported_funcs=src_prepare:cmake-utils src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=3a2d45715f9acb81a772ea61d55224fe diff --git a/metadata/md5-cache/sci-chemistry/votca-csgapps-9999 b/metadata/md5-cache/sci-chemistry/votca-csgapps-9999 index b90441adea48..1ca33f9f3cb1 100644 --- a/metadata/md5-cache/sci-chemistry/votca-csgapps-9999 +++ b/metadata/md5-cache/sci-chemistry/votca-csgapps-9999 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install prepare test unpack -DEPEND=~sci-chemistry/votca-csg-9999 dev-util/ninja >=dev-util/cmake-3.5.2 >=dev-vcs/git-1.8.2.1 +DEPEND=~sci-chemistry/votca-csg-9999 dev-util/ninja >=dev-util/cmake-3.6.3 >=dev-vcs/git-1.8.2.1 DESCRIPTION=Extra applications for votca-csg EAPI=6 HOMEPAGE=http://www.votca.org @@ -7,5 +7,5 @@ LICENSE=Apache-2.0 RDEPEND=~sci-chemistry/votca-csg-9999 SLOT=0 _eclass_exported_funcs=src_unpack:git-r3 src_prepare:cmake-utils src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=d6e7f710a7cf65553a2cd23835efa670 diff --git a/metadata/md5-cache/sci-chemistry/votca-xtp-1.4 b/metadata/md5-cache/sci-chemistry/votca-xtp-1.4 index 0e8fd3e7cc40..4fe6ac276cf7 100644 --- a/metadata/md5-cache/sci-chemistry/votca-xtp-1.4 +++ b/metadata/md5-cache/sci-chemistry/votca-xtp-1.4 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare test -DEPEND==sci-libs/votca-tools-1.4[sqlite] =sci-chemistry/votca-csg-1.4 doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.5.2 +DEPEND==sci-libs/votca-tools-1.4[sqlite] =sci-chemistry/votca-csg-1.4 doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.6.3 DESCRIPTION=Votca excitation and charge properties module EAPI=6 HOMEPAGE=http://www.votca.org @@ -10,5 +10,5 @@ RDEPEND==sci-libs/votca-tools-1.4[sqlite] =sci-chemistry/votca-csg-1.4 SLOT=0 SRC_URI=https://github.com/votca/xtp/archive/v1.4.tar.gz -> votca-xtp-1.4.tar.gz doc? ( https://github.com/votca/xtp/releases/download/v1.4/votca-xtp-manual-1.4.pdf ) _eclass_exported_funcs=pkg_postinst:- src_prepare:cmake-utils src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=1a0fd4a968164a3902c533dbe6b72daa diff --git a/metadata/md5-cache/sci-chemistry/votca-xtp-9999 b/metadata/md5-cache/sci-chemistry/votca-xtp-9999 index 8c9404da61c5..c5ef365135ed 100644 --- a/metadata/md5-cache/sci-chemistry/votca-xtp-9999 +++ b/metadata/md5-cache/sci-chemistry/votca-xtp-9999 @@ -1,5 +1,5 @@ DEFINED_PHASES=compile configure install postinst prepare test unpack -DEPEND==sci-libs/votca-tools-9999[sqlite] =sci-chemistry/votca-csg-9999 doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.5.2 >=dev-vcs/git-1.8.2.1 +DEPEND==sci-libs/votca-tools-9999[sqlite] =sci-chemistry/votca-csg-9999 doc? ( app-doc/doxygen[dot] dev-texlive/texlive-latexextra virtual/latex-base dev-tex/pgf ) >=app-text/txt2tags-2.5 virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.6.3 >=dev-vcs/git-1.8.2.1 DESCRIPTION=Votca excitation and charge properties module EAPI=6 HOMEPAGE=http://www.votca.org @@ -8,5 +8,5 @@ LICENSE=Apache-2.0 RDEPEND==sci-libs/votca-tools-9999[sqlite] =sci-chemistry/votca-csg-9999 SLOT=0 _eclass_exported_funcs=pkg_postinst:- src_unpack:git-r3 src_prepare:cmake-utils src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils b602fb1ae4bc807a6756bb8b187fbe54 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=bash-completion-r1 acf715fa09463f043fbfdc1640f3fb85 cmake-utils 014267c4475c1a625ecec5b16e0db1e6 eutils ea170b525f6a38a006be05c9d9429f13 flag-o-matic 7366202dd55cb8f018f5d450d54e7749 git-r3 6efc2d7de07a77bf72c7207b48d0e123 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing 7bb10a841be2368af0c00f27dd67560b toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=edcacb698e7adf025084957cbc04a79f |