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* sci-libs/rtree: add missing depAndrew Ammerlaan2021-06-051-0/+1
| | | | | | Closes: https://bugs.gentoo.org/794445 Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/ceres-solver: properly depend on sphinx(_rtd_theme)Andrew Ammerlaan2021-06-051-2/+4
| | | | | Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/ceres-solver: add python-3.9 supportBernd Waibel2021-06-051-2/+2
| | | | | | | | | Bugday 2021-06-05 Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Closes: https://github.com/gentoo/gentoo/pull/21130 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/rtree: add 0.9.7, add py3.10Andrew Ammerlaan2021-06-053-0/+35
| | | | | | Closes: https://bugs.gentoo.org/791766 Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/opencascade: add missing die to 7.5.1-r1Joonas Niilola2021-06-041-1/+1
| | | | Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/opencascade: patch cmake config so that find_package worksWolfgang E. Sanyer2021-06-041-0/+7
| | | | | | Signed-off-by: Wolfgang E. Sanyer <ezzieyguywuf@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/20856 Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/mathgl: subscribe to sci-libs/gsl subslotSam James2021-06-021-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/dealii: subscribe to sci-libs/gsl subslotSam James2021-06-023-3/+3
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/dealii: fix QA issuesMatthias Maier2021-06-023-3/+0
| | | | | | Closes: https://bugs.gentoo.org/741750 Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/dealii: version bump to 9.3.0Matthias Maier2021-06-022-0/+164
| | | | | Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/dealii: update live ebuildMatthias Maier2021-06-021-5/+15
| | | | | | | | - fix dependency - migrate away from cmake-utils.eclass Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/vtk: delete README from bundled vtkm for nowSam James2021-06-021-0/+5
| | | | | | | | | | | Avoids collision with paraview. We'll ideally try to get paraview building with system VTK again but VTK takes a while to build so anything to prevent collisions for users now is important while we investigate that possibility. Bug: https://bugs.gentoo.org/253881 Bug: https://bugs.gentoo.org/793221 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gsl: add 2.7Sam James2021-06-012-0/+65
| | | | | | | Closes: https://bugs.gentoo.org/725368 Bug: https://bugs.gentoo.org/687126 Bug: https://bugs.gentoo.org/687342 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/linux-gpib: Remove oldMichał Górny2021-05-312-179/+0
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/scotch: drop inactive maintainerDavid Seifert2021-05-311-4/+0
| | | | | Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/vtk: add various GCC 11 fixesSam James2021-05-312-0/+85
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/vtk: bump to 9.0.1Bernd Waibel2021-05-314-1/+579
| | | | | | | Closes: https://bugs.gentoo.org/723744 Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/o2scl: drop deprecated ltprune eclassConrad Kostecki2021-05-311-2/+6
| | | | | Signed-off-by: Conrad Kostecki <conikost@gentoo.org> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/netcdf-fortran: drop deprecated ltprune eclassConrad Kostecki2021-05-311-2/+2
| | | | | Signed-off-by: Conrad Kostecki <conikost@gentoo.org> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/hdf: drop deprecated ltprune eclassConrad Kostecki2021-05-311-2/+8
| | | | | Signed-off-by: Conrad Kostecki <conikost@gentoo.org> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/coinor-dip: prevent python-2.7 automagicIonen Wolkens2021-05-311-0/+3
| | | | | | | | | | | | | When python-2.7 is installed it attempts to build dippy which fails with slibtool due a typo that GNU libtool ignored. Rather than fix, since it installs some unsupported 2.7 site-packages, block it and revbump to clear these. Closes: https://bugs.gentoo.org/778965 Signed-off-by: Ionen Wolkens <sudinave@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/20171 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/alglib: Drop 3.10.0-r1Andreas Sturmlechner2021-05-302-34/+0
| | | | | | Closes: https://bugs.gentoo.org/789246 Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/pyshp: Add python 3_10 supportThomas Beierlein2021-05-301-1/+1
| | | | | Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Thomas Beierlein <tomjbe@gentoo.org>
* sci-libs/pyshp: Drop oldThomas Beierlein2021-05-302-26/+0
| | | | | Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Thomas Beierlein <tomjbe@gentoo.org>
* sci-libs/brial: perform tc-export in src_configureSam James2021-05-291-3/+1
| | | | | Signed-off-by: Sam James <sam@gentoo.org> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/parmetis: use tc-check-openmpSam James2021-05-291-6/+1
| | | | | Signed-off-by: Sam James <sam@gentoo.org> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/parmetis: add missing libpcre dependencySam James2021-05-291-2/+3
| | | | | Signed-off-by: Sam James <sam@gentoo.org> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/scikit-learn: drop 0.23.2Andrew Ammerlaan2021-05-292-67/+0
| | | | | | | | Closes: https://bugs.gentoo.org/754333 Bug: https://bugs.gentoo.org/758323 Bug: https://bugs.gentoo.org/788592 Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/scikit-learn: bump to 0.24.2Andrew Ammerlaan2021-05-293-5/+15
| | | | | Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/scikit-learn: version bump to 0.24.1Aisha Tammy2021-05-293-0/+114
| | | | | | | Package-Manager: Portage-3.0.12, Repoman-3.0.2 Signed-off-by: Aisha Tammy <gentoo@aisha.cc> Closes: https://github.com/gentoo/gentoo/pull/18790 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/cdf: add version 3.8.0Andrew Ammerlaan2021-05-294-0/+239
| | | | | | | | | | | | | | | | | - bumped java version - no longer installs into /usr/CDFLeapSeconds.txt - no longer calls CC directly - restricted bindist Closes: https://bugs.gentoo.org/786708 Closes: https://bugs.gentoo.org/773076 Closes: https://bugs.gentoo.org/633438 Closes: https://bugs.gentoo.org/544588 Closes: https://bugs.gentoo.org/544588 Closes: https://bugs.gentoo.org/731932 Closes: https://bugs.gentoo.org/695390 Package-Manager: Portage-3.0.19, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/libqalculate: ppc64 stable wrt bug #791961Agostino Sarubbo2021-05-281-1/+1
| | | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/libqalculate: ppc stable wrt bug #791961Agostino Sarubbo2021-05-281-1/+1
| | | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 RepoMan-Options: --include-arches="ppc" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/gdal: drop obsolete configure option (--without-epsilon)Sam James2021-05-281-1/+0
| | | | | Closes: https://bugs.gentoo.org/792588 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: drop obsolete doins for examplesSam James2021-05-281-3/+0
| | | | | Closes: https://bugs.gentoo.org/792672 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/armadillo: fix docinto argument (avoid double 'prefix')Sam James2021-05-282-2/+6
| | | | | Signed-off-by: Sam James <sam@gentoo.org> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/alglib: x86 stable wrt bug #789246Agostino Sarubbo2021-05-281-1/+1
| | | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/gdal: add 3.3.0Sam James2021-05-284-0/+897
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/cddlib: Remove old 094jJakov Smolic2021-05-272-54/+0
| | | | | Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/openlibm: Bump to 0.7.5Jakov Smolic2021-05-272-0/+34
| | | | | Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/libxc: Remove old 5.1.1Jakov Smolic2021-05-272-41/+0
| | | | | | Closes: https://bugs.gentoo.org/772893 Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/libxc: Bump to 5.1.4Jakov Smolic2021-05-272-0/+41
| | | | | Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/libecpint: Bump to 1.0.6Jakov Smolic2021-05-272-0/+28
| | | | | Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/klu: Drop static-libsJakov Smolic2021-05-272-5/+4
| | | | | Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/matio: Remove old 1.5.19Jakov Smolic2021-05-272-47/+0
| | | | | | Closes: https://bugs.gentoo.org/695314 Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/mpir: Port to EAPI 7, drop static-libsJakov Smolic2021-05-272-12/+10
| | | | | Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/hypre: Bump to 2.21.0Jakov Smolic2021-05-272-0/+113
| | | | | Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/hypre: Remove old 2.18.2-r1 Jakov Smolic2021-05-272-102/+0
| | | | | Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/dlib: Remove old 19.16-r1Jakov Smolic2021-05-272-107/+0
| | | | | Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/libgeotiff: Drop unused USE=static-libs in 1.6.0Jakov Smolic2021-05-271-1/+1
| | | | | Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>