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* sci-mathematics/slepc: version bump to 3.13.1; remove oldMatthias Maier2020-04-293-88/+6
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-mathematics/petsc: drop oldMatthias Maier2020-04-296-529/+0
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-mathematics/petsc: version bump to 13.0Matthias Maier2020-04-295-0/+332
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-mathematics/pari: replace DOCS array.Michael Orlitzky2020-04-281-0/+1
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/rstudio: Bump to 1.2.5042Mark Wright2020-04-283-0/+259
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Mark Wright <gienah@gentoo.org>
* sci-mathematics/pari: remove DOCS array, works fine withoutJoonas Niilola2020-04-261-2/+0
| | | | Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-mathematics/pari: move DOCS array to its correct placeJoonas Niilola2020-04-261-1/+2
| | | | Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-mathematics/pari: superceded by new releaseFrançois Bissey2020-04-263-162/+0
| | | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: François René Pierre Bissey <frp.bissey@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/15441 Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-mathematics/pari: New upstream releaseFrançois Bissey2020-04-262-0/+112
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: François René Pierre Bissey <frp.bissey@gmail.com> Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-mathematics/dunshire: new revision supporting python-3.{7,8}.Michael Orlitzky2020-04-191-5/+12
| | | | | | | | Updated to EAPI=7 and added a missing dependency while I was at it. Closes: https://bugs.gentoo.org/718502 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/flintqs: amd64 stable wrt bug #717958Agostino Sarubbo2020-04-191-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/flintqs: x86 stable wrt bug #717958Agostino Sarubbo2020-04-191-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/flintqs: fix the test suite.Michael Orlitzky2020-04-181-1/+1
| | | | | | | | | | I accidentally tested the installed version of QuadraticSieve (which may not exist) instead of the one we just built. Thanks to François Bissey who figured out what I did wrong. Closes: https://bugs.gentoo.org/718006 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/pari: new release + upstream patchFrançois Bissey2020-04-173-0/+162
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: François René Pierre Bissey <frp.bissey@gmail.com> Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-mathematics/gfan: disable test that hangs on x86.Michael Orlitzky2020-04-151-0/+11
| | | | | | | | | | The "0602ResultantFanProjection" test hangs on x86, leading to a build failure. Disabling this test looks as simple as deleting it from the source tree, which the ebuild now does in src_prepare(). Bug: https://bugs.gentoo.org/717112 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/gfan: remove old "unused" version and patches.Michael Orlitzky2020-04-136-243/+0
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/glpk: remove old "unused" version and files.Michael Orlitzky2020-04-133-158/+0
| | | | | | Closes: https://bugs.gentoo.org/666060 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/glpk: x86 stable wrt bug #717072Agostino Sarubbo2020-04-131-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/glpk: amd64 stable wrt bug #717072Agostino Sarubbo2020-04-131-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/gfan: x86 stable wrt bug #716362Agostino Sarubbo2020-04-131-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/glpk: ppc64 stable wrt bug #717072Agostino Sarubbo2020-04-131-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/glpk: ppc stable wrt bug #717072Agostino Sarubbo2020-04-131-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="ppc" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/glpk: stable 4.65 for sparc, bug #717072Rolf Eike Beer2020-04-131-1/+1
| | | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="sparc" Signed-off-by: Rolf Eike Beer <eike@sf-mail.de> Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-mathematics/glpk: drop to ~hppaRolf Eike Beer2020-04-111-1/+1
| | | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="hppa" Signed-off-by: Rolf Eike Beer <eike@sf-mail.de> Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-mathematics/octave: drop to ~hppaRolf Eike Beer2020-04-111-2/+2
| | | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="hppa" Signed-off-by: Rolf Eike Beer <eike@sf-mail.de> Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-mathematics/maxima: revert 9cac2697e91de4b2484524f4f5618d809a8b03caAndrey Grozin2020-04-071-10/+0
| | | | | | | This change has broken building with sbcl Closes: https://bugs.gentoo.org/show_bug.cgi?id=715330 Package-Manager: Portage-2.3.96, Repoman-2.3.22 Signed-off-by: Andrey Grozin <grozin@gentoo.org>
* sci-mathematics/gfan: amd64 stable wrt bug #716362Agostino Sarubbo2020-04-071-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/flint: Drop 2.4.4-r1Andreas Sturmlechner2020-04-069-367/+0
| | | | | Package-Manager: Portage-2.3.96, Repoman-2.3.22 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-mathematics/flint: ppc stable wrt bug #716184Agostino Sarubbo2020-04-061-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="ppc" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/flint: keyworded 2.5.2-r1 for ppc, bug #712002Sergei Trofimovich2020-04-041-1/+1
| | | | | | Package-Manager: Portage-2.3.96, Repoman-2.3.22 RepoMan-Options: --include-arches="ppc" Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* */*: Drop stable ia64 keywordsMatt Turner2020-04-031-1/+1
| | | | Signed-off-by: Matt Turner <mattst88@gentoo.org>
* sci-mathematics/flintqs: new package for quadratic sieve factoring.Michael Orlitzky2020-03-303-0/+64
| | | | | | | | | | | A straightforward import of the ebuild that François Bissey has been maintaining in the sage-on-gentoo overlay. I added a test suite that factors a large composite number based on the doctests for qsieve() in SageMath. Closes: https://bugs.gentoo.org/715090 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/octave: new version 5.2.0 sans imagemagick support.Michael Orlitzky2020-03-272-0/+202
| | | | | | | | | | | | | | | | | This new version drops two patches (zlib underlinking and qt-5.11 support) that have been fixed upstream in other ways. Unfortunately, it also temporarily disables USE=imagemagick, because the upstream support for imagemagick is broken. In the past, we have carried custom patches to fix that, but they no longer apply, and upstream has hinted that the approach they take will not be accepted. So to get this out the door, the simplest thing to do is to follow upstream and throw imagemagick under a bus. Bug: https://bugs.gentoo.org/401189 Bug: https://bugs.gentoo.org/660298 Closes: https://bugs.gentoo.org/709388 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/maxima: remove outdated app-emacs/imaxima blocker.Michael Orlitzky2020-03-261-1/+1
| | | | | | | | | | | | | Fix the pkgcheck warning OutdatedBlocker: version 5.43.2: outdated blocker DEPEND="!app-emacs/imaxima": last match removed 3.12 years ago by deleting that blocker. Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/maxima: fix amd64 build with USE=clozurecl.Michael Orlitzky2020-03-261-0/+10
| | | | | | | | | The maxima build needs some special-case hacking on amd64 with clozurecl. Thanks to slyfox for the patch. Closes: https://bugs.gentoo.org/665364 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/eclib: x86 stable wrt bug #714602Agostino Sarubbo2020-03-251-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/cliquer: x86 stable wrt bug #714472Agostino Sarubbo2020-03-251-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/eclib: amd64 stable wrt bug #714602Agostino Sarubbo2020-03-251-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/cliquer: amd64 stable wrt bug #714472Agostino Sarubbo2020-03-251-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-mathematics/planarity: maintainer stabilize on amd64/x86.Michael Orlitzky2020-03-241-1/+1
| | | | | | | | | There's no easy way to test this package, but I regularly use (and test) its SageMath interface, so I'm going to save the arch teams a pointless build test and stabilize it myself this time. Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/rw: maintainer stabilize on amd64/x86.Michael Orlitzky2020-03-241-1/+1
| | | | | | | | | The best way to test this package is through its SageMath interface, which I do pretty regularly. The latest revision just drops a USE flag, and the previous one was around forever. It's stable. Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/z3-4.8.6: Add missing dep on dev-libs/gmp[cxx]Patrick McLean2020-03-201-1/+1
| | | | | Package-Manager: Portage-2.3.94, Repoman-2.3.21 Signed-off-by: Patrick McLean <chutzpah@gentoo.org>
* sci-mathematics/pymc3: Remove py2 virtualsMichał Górny2020-03-161-1/+0
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-mathematics/genius: bump to 1.0.25, move to USE=guiMart Raudsepp2020-03-133-0/+232
| | | | | | Closes: https://bugs.gentoo.org/711782 Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Mart Raudsepp <leio@gentoo.org>
* sci-mathematics/alt-ergo: fix build with ocaml-4.09Tupone Alfredo2020-03-101-2/+7
| | | | | | Closes: https://bugs.gentoo.org/712032 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-mathematics/fricas: bump to 1.3.6Andrey Grozin2020-03-102-0/+109
| | | | | Package-Manager: Portage-2.3.93, Repoman-2.3.20 Signed-off-by: Andrey Grozin <grozin@gentoo.org>
* sci-mathematics/flint: Drop 2.4.5 and 2.5.2 (r0)Andreas Sturmlechner2020-03-093-141/+0
| | | | | Package-Manager: Portage-2.3.93, Repoman-2.3.20 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-mathematics/gmp-ecm: cleanup old versions.Michael Orlitzky2020-03-093-116/+0
| | | | | Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/arb: cleanup old versions and patches.Michael Orlitzky2020-03-094-133/+0
| | | | | Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-mathematics/gmp-ecm: x86 stable wrt bug #711872Agostino Sarubbo2020-03-091-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>