DEFINED_PHASES=configure prepare DEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.59.0:= dev-cpp/eigen:3 !=sys-devel/automake-1.15:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 DESCRIPTION=Transcript assembly and differential expression/regulation for RNA-Seq EAPI=6 HOMEPAGE=http://cufflinks.cbcb.umd.edu/ IUSE=debug KEYWORDS=~amd64 ~x86 LICENSE=Artistic RDEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.59.0:= dev-cpp/eigen:3 SLOT=0 SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- _eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=6b93e6dbae7355a08affefe4c39cf8dc