DEFINED_PHASES=configure prepare DEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.59.0:= dev-cpp/eigen:3 !=sys-devel/automake-1.15:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 DESCRIPTION=Transcript assembly and differential expression/regulation for RNA-Seq EAPI=6 HOMEPAGE=http://cufflinks.cbcb.umd.edu/ IUSE=debug KEYWORDS=~amd64 ~x86 LICENSE=Artistic RDEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.59.0:= dev-cpp/eigen:3 SLOT=0 SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- _eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 122e1264e67c4f59a1482f2095e0b35d estack 5ac2a138d0b33354b764d84f9e835db8 eutils 1ef31aee2bd63ffbfcae8a1843c9208d flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool 48b1b9f6194d2842456514d1184ca72e ltprune 2770eed66a9b8ef944714cd0e968182e multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee _md5_=4ad79d5b383bcb53a250a681604a4756