diff options
| author |   Stephen Diener <sediener@gentoo.org> | 2004-01-09 02:53:25 +0000 |
|---|---|---|
| committer | Stephen Diener <sediener@gentoo.org> | 2004-01-09 02:53:25 +0000 |
| commit | e9cf00306cd72dd675663f08d2f6b32ac56c3f35 (patch) | |
| tree | 3723ad20ca117925477894087bad652fd100f917 /app-sci | |
| parent | version bump new release (diff) | |
| download | gentoo-2-e9cf00306cd72dd675663f08d2f6b32ac56c3f35.tar.gz gentoo-2-e9cf00306cd72dd675663f08d2f6b32ac56c3f35.tar.bz2 gentoo-2-e9cf00306cd72dd675663f08d2f6b32ac56c3f35.zip | |
version bump new release
Diffstat (limited to 'app-sci')
| -rw-r--r-- | app-sci/bioperl/ChangeLog | 7 | ||||
| -rw-r--r-- | app-sci/bioperl/Manifest | 4 | ||||
| -rw-r--r-- | app-sci/bioperl/bioperl-1.4.ebuild | 51 | ||||
| -rw-r--r-- | app-sci/bioperl/files/digest-bioperl-1.4 | 1 |
4 files changed, 60 insertions, 3 deletions
diff --git a/app-sci/bioperl/ChangeLog b/app-sci/bioperl/ChangeLog index 826bc6f84ebf..804af3f2fe14 100644 --- a/app-sci/bioperl/ChangeLog +++ b/app-sci/bioperl/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for app-sci/bioperl # Copyright 2002-2003 Gentoo Technologies, Inc.; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/app-sci/bioperl/ChangeLog,v 1.7 2003/11/24 20:48:06 sediener Exp $ +# $Header: /var/cvsroot/gentoo-x86/app-sci/bioperl/ChangeLog,v 1.8 2004/01/09 02:53:08 sediener Exp $ + +*bioperl-1.4 (08 Jan 2004) + + 08 Jan 2004; Stephen Diener <sediener@gentoo.org> bioperl-1.4.ebuild: + version bump 24 Nov 2003; Stephen Diener <sediener@gentoo.org> bioperl-1.2.3.ebuild: bump to stable. diff --git a/app-sci/bioperl/Manifest b/app-sci/bioperl/Manifest index e4490f630acb..b108a473501a 100644 --- a/app-sci/bioperl/Manifest +++ b/app-sci/bioperl/Manifest @@ -2,8 +2,8 @@ MD5 20616984167d7ac1a9db33713d70e93f bioperl-1.0.2.ebuild 1496 MD5 64c8b83ffe189aa1d5300210ee41f999 bioperl-1.2.3.ebuild 2082 MD5 ce01843f37edf576d07e2423ee6d486e bioperl-1.2.ebuild 1524 MD5 683bbc29b2f9f4f309efbecfea7184a1 bioperl-1.2.2.ebuild 2198 -MD5 91f77d74fd5f87b99f31b0733b9c9c3c bioperl-1.4.ebuild 1237 -MD5 61a74e4b80a1ab784b31f2d1e80079ff ChangeLog 1202 +MD5 8fe38f214ed28a3f60beec674edba02c bioperl-1.4.ebuild 1171 +MD5 d7b4ebc61a4bf0401f0da5e44b9a192e ChangeLog 1318 MD5 e8b4df3df76800c376905734d8043cfa metadata.xml 216 MD5 8f6c3beb108aaa2b78b0b4f8d218187a files/biodbgff-enable-1.2.2.patch 3355 MD5 1828ff2ba6225e17a98d27bfbad5c7c9 files/bioperl-1.2-manpage.diff 712 diff --git a/app-sci/bioperl/bioperl-1.4.ebuild b/app-sci/bioperl/bioperl-1.4.ebuild new file mode 100644 index 000000000000..ec3c46c88a7c --- /dev/null +++ b/app-sci/bioperl/bioperl-1.4.ebuild @@ -0,0 +1,51 @@ +# Copyright 1999-2004 Gentoo Technologies, Inc. +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/app-sci/bioperl/bioperl-1.4.ebuild,v 1.1 2004/01/09 02:53:08 sediener Exp $ + +inherit perl-module eutils + +CATEGORY="app-sci" + +DESCRIPTION="collection of tools for bioinformatics, genomics and life science research" +HOMEPAGE="http://www.bioperl.org/" +SRC_URI="http://www.bioperl.org/ftp/DIST/${P}.tar.bz2" + +LICENSE="Artistic GPL-2" +SLOT="0" +KEYWORDS="~x86" +IUSE="mysql gd" + +DEPEND=" + dev-perl/File-Temp + dev-perl/HTML-Parser + dev-perl/IO-String + dev-perl/IO-stringy + dev-perl/SOAP-Lite + dev-perl/Storable + dev-perl/XML-DOM + dev-perl/XML-Parser + dev-perl/XML-Writer + dev-perl/XML-Twig + dev-perl/libxml-perl + dev-perl/libwww-perl + dev-perl/Graph + dev-perl/Text-Shellwords + gd? ( + >=dev-perl/GD-1.32-r1 + dev-perl/SVG + dev-perl/GD-SVG + ) + mysql? ( >=dev-perl/DBD-mysql-2.1004-r3 )" + +RDEPEND="${DEPEND}" + +src_compile() { + yes "" | perl Makefile.PL ${myconf} \ + PREFIX=${D}/usr INSTALLDIRS=vendor + perl-module_src_test || die "Test Failed" +} + +src_install() { + mydoc="AUTHORS BUGS FAQ" + perl-module_src_install +} diff --git a/app-sci/bioperl/files/digest-bioperl-1.4 b/app-sci/bioperl/files/digest-bioperl-1.4 new file mode 100644 index 000000000000..43354ceffe03 --- /dev/null +++ b/app-sci/bioperl/files/digest-bioperl-1.4 @@ -0,0 +1 @@ +MD5 c49922bb58699cf42765056da8944f6e bioperl-1.4.tar.bz2 4224508 |