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| author |   Sergei Trofimovich <slyfox@gentoo.org> | 2015-03-10 21:58:41 +0000 |
|---|---|---|
| committer | Sergei Trofimovich <slyfox@gentoo.org> | 2015-03-10 21:58:41 +0000 |
| commit | 377a840e37bbb736957bdb27d63991ff029f9d6b (patch) | |
| tree | db34fe0e97c626b1ef28a1e3bbe3f8f768e8b938 /dev-haskell | |
| parent | A bioinformatics library for haskell (requested by Martin MOKREJŠ). (diff) | |
| download | gentoo-2-377a840e37bbb736957bdb27d63991ff029f9d6b.tar.gz gentoo-2-377a840e37bbb736957bdb27d63991ff029f9d6b.tar.bz2 gentoo-2-377a840e37bbb736957bdb27d63991ff029f9d6b.zip | |
A bioinformatics library for haskell (requested by Martin MOKREJŠ).
(Portage version: 2.2.17/cvs/Linux x86_64, signed Manifest commit with key 611FF3AA)
Diffstat (limited to 'dev-haskell')
| -rw-r--r-- | dev-haskell/biosff/ChangeLog | 9 | ||||
| -rw-r--r-- | dev-haskell/biosff/biosff-0.3.7.1.ebuild | 36 | ||||
| -rw-r--r-- | dev-haskell/biosff/metadata.xml | 15 |
3 files changed, 60 insertions, 0 deletions
diff --git a/dev-haskell/biosff/ChangeLog b/dev-haskell/biosff/ChangeLog new file mode 100644 index 000000000000..7fa79a697550 --- /dev/null +++ b/dev-haskell/biosff/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for dev-haskell/biosff +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/dev-haskell/biosff/ChangeLog,v 1.1 2015/03/10 21:58:41 slyfox Exp $ + +*biosff-0.3.7.1 (10 Mar 2015) + + 10 Mar 2015; Sergei Trofimovich <slyfox@gentoo.org> +biosff-0.3.7.1.ebuild, + +metadata.xml: + A bioinformatics library for haskell (requested by Martin MOKREJŠ). diff --git a/dev-haskell/biosff/biosff-0.3.7.1.ebuild b/dev-haskell/biosff/biosff-0.3.7.1.ebuild new file mode 100644 index 000000000000..2bff9d66d9ed --- /dev/null +++ b/dev-haskell/biosff/biosff-0.3.7.1.ebuild @@ -0,0 +1,36 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/dev-haskell/biosff/biosff-0.3.7.1.ebuild,v 1.1 2015/03/10 21:58:41 slyfox Exp $ + +EAPI=5 + +# ebuild generated by hackport 0.3.4.9999 + +CABAL_FEATURES="bin lib profile haddock hoogle hscolour" +inherit haskell-cabal + +DESCRIPTION="Library and executables for working with SFF files" +HOMEPAGE="http://biohaskell.org/" +SRC_URI="mirror://hackage/packages/archive/${PN}/${PV}/${P}.tar.gz" + +LICENSE="LGPL-2.1" +SLOT="0/${PV}" +KEYWORDS="~amd64 ~x86" +IUSE="+fclip +flower +frecover" + +RDEPEND="dev-haskell/binary:=[profile?] + >=dev-haskell/biocore-0.3:=[profile?] + dev-haskell/cmdargs:=[profile?] + >=dev-haskell/mtl-2:=[profile?] + >=dev-lang/ghc-7.4.1:= +" +DEPEND="${RDEPEND} + >=dev-haskell/cabal-1.6 +" + +src_configure() { + haskell-cabal_src_configure \ + $(cabal_flag fclip fclip) \ + $(cabal_flag flower flower) \ + $(cabal_flag frecover frecover) +} diff --git a/dev-haskell/biosff/metadata.xml b/dev-haskell/biosff/metadata.xml new file mode 100644 index 000000000000..714e2ad3539d --- /dev/null +++ b/dev-haskell/biosff/metadata.xml @@ -0,0 +1,15 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>haskell</herd> + <longdescription> + The library contains the functionality for reading and writing + SFF files (sequencing data from 454 and Ion Torrent). It duplicates + code from (and is incompatible with) the "bio" library. + </longdescription> + <use> + <flag name="fclip">Build the fclip executable.</flag> + <flag name="flower">Build the flower executable.</flag> + <flag name="frecover">Build the frecover executable.</flag> + </use> +</pkgmetadata> |