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authorJustin Lecher <jlec@gentoo.org>2015-03-05 11:07:15 +0000
committerJustin Lecher <jlec@gentoo.org>2015-03-05 11:07:15 +0000
commit667dd1541096047403fa913adb0db419959527e8 (patch)
tree8b42d35870cc8de8617fdc0b68023afd79ac2fbf /sci-biology/mammoth
parentCleaned obsolete entries in package.use.mask (diff)
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EAPI Bump
(Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Diffstat (limited to 'sci-biology/mammoth')
-rw-r--r--sci-biology/mammoth/ChangeLog11
-rw-r--r--sci-biology/mammoth/mammoth-1.0-r1.ebuild (renamed from sci-biology/mammoth/mammoth-1.0.ebuild)16
-rw-r--r--sci-biology/mammoth/metadata.xml2
3 files changed, 14 insertions, 15 deletions
diff --git a/sci-biology/mammoth/ChangeLog b/sci-biology/mammoth/ChangeLog
index 594acc031308..9b62db4a2d37 100644
--- a/sci-biology/mammoth/ChangeLog
+++ b/sci-biology/mammoth/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for sci-biology/mammoth
-# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/mammoth/ChangeLog,v 1.6 2012/10/19 10:46:56 jlec Exp $
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mammoth/ChangeLog,v 1.7 2015/03/05 11:07:15 jlec Exp $
+
+*mammoth-1.0-r1 (05 Mar 2015)
+
+ 05 Mar 2015; Justin Lecher <jlec@gentoo.org> +mammoth-1.0-r1.ebuild,
+ -mammoth-1.0.ebuild, metadata.xml:
+ EAPI Bump
19 Oct 2012; Justin Lecher <jlec@gentoo.org> mammoth-1.0.ebuild,
metadata.xml:
@@ -26,4 +32,3 @@
+mammoth-1.0.ebuild:
Add mammoth, a nice structural alignment program. It contains the MaxSub
algorithm, which is used by lots of people.
-
diff --git a/sci-biology/mammoth/mammoth-1.0.ebuild b/sci-biology/mammoth/mammoth-1.0-r1.ebuild
index d1d9a1719b1c..b93fbfa806e2 100644
--- a/sci-biology/mammoth/mammoth-1.0.ebuild
+++ b/sci-biology/mammoth/mammoth-1.0-r1.ebuild
@@ -1,6 +1,8 @@
-# Copyright 1999-2012 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/mammoth/mammoth-1.0.ebuild,v 1.6 2012/10/19 10:46:56 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mammoth/mammoth-1.0-r1.ebuild,v 1.1 2015/03/05 11:07:15 jlec Exp $
+
+EAPI=5
inherit autotools eutils fortran-2 flag-o-matic toolchain-funcs
@@ -25,10 +27,7 @@ pkg_nofetch() {
einfo "and place it in ${DISTDIR}"
}
-src_unpack() {
- unpack ${A}
- cd "${S}"
-
+src_prepare() {
# Broken with gfortran without this patch
epatch "${FILESDIR}"/${PV}-consistent-system-intrinsic.patch
@@ -42,8 +41,3 @@ src_unpack() {
# Let's do the standard stuff instead.
eautoreconf
}
-
-src_install() {
- emake DESTDIR="${D}" install || die "emake install failed"
- dodoc README AUTHORS || die
-}
diff --git a/sci-biology/mammoth/metadata.xml b/sci-biology/mammoth/metadata.xml
index d4648212cbad..f17a827e3101 100644
--- a/sci-biology/mammoth/metadata.xml
+++ b/sci-biology/mammoth/metadata.xml
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <herd>sci-biology</herd>
+ <herd>sci-biology</herd>
</pkgmetadata>