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authorJustin Lecher <jlec@gentoo.org>2012-03-08 07:15:15 +0000
committerJustin Lecher <jlec@gentoo.org>2012-03-08 07:15:15 +0000
commit0c122ff205104493f6ad006319fd77d55e4dffae (patch)
tree823da2e69e5e36fb3a7daeb628e1bee081f84798 /sci-biology/rebase
parentUpstream snapshot to include support for some IS installers wrt #361971 by Ro... (diff)
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Dropped old
(Portage version: 2.2.0_alpha90/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology/rebase')
-rw-r--r--sci-biology/rebase/ChangeLog6
-rw-r--r--sci-biology/rebase/rebase-1006.ebuild51
-rw-r--r--sci-biology/rebase/rebase-1105.ebuild53
3 files changed, 5 insertions, 105 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index de25b064d3f6..32f2200f4bf2 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/rebase
# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.113 2012/03/07 20:49:46 ranger Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.114 2012/03/08 07:15:15 jlec Exp $
+
+ 08 Mar 2012; Justin Lecher <jlec@gentoo.org> -rebase-1006.ebuild,
+ -rebase-1105.ebuild:
+ Dropped old
07 Mar 2012; Brent Baude <ranger@gentoo.org> rebase-1111.ebuild:
Marking rebase-1111 ppc for bug 402053
diff --git a/sci-biology/rebase/rebase-1006.ebuild b/sci-biology/rebase/rebase-1006.ebuild
deleted file mode 100644
index 39afb1341aac..000000000000
--- a/sci-biology/rebase/rebase-1006.ebuild
+++ /dev/null
@@ -1,51 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1006.ebuild,v 1.10 2011/08/09 15:36:16 xarthisius Exp $
-
-EAPI="3"
-
-MY_PV=${PV#1}
-
-DESCRIPTION="A restriction enzyme database"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="mirror://gentoo/${P}.tar.xz"
-
-SLOT="0"
-# Minimal build keeps only the indexed files (if applicable) and the
-# documentation. The non-indexed database is not installed.
-IUSE="emboss minimal"
-KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
-LICENSE="public-domain"
-
-RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
-DEPEND="${RDEPEND}"
-
-RESTRICT="binchecks strip"
-
-src_compile() {
- if use emboss; then
- echo; einfo "Indexing Rebase for usage with EMBOSS."
- mkdir REBASE
- EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
- -protofile proto.${MY_PV} -equivalences \
- || die "Indexing Rebase failed."
- echo
- fi
-}
-
-src_install() {
- if ! use minimal; then
- insinto /usr/share/${PN}
- doins withrefm.${MY_PV} proto.${MY_PV} || die \
- "Failed to install raw database."
- fi
- newdoc REBASE.DOC README || die "Failed to install documentation."
- if use emboss; then
- insinto /usr/share/EMBOSS/data/REBASE
- doins REBASE/embossre.{enz,ref,sup} || die \
- "Failed to install EMBOSS data files."
- insinto /usr/share/EMBOSS/data
- doins REBASE/embossre.equ \
- || die "Failed to install enzyme prototypes file."
- fi
-}
diff --git a/sci-biology/rebase/rebase-1105.ebuild b/sci-biology/rebase/rebase-1105.ebuild
deleted file mode 100644
index 3da08e665bed..000000000000
--- a/sci-biology/rebase/rebase-1105.ebuild
+++ /dev/null
@@ -1,53 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1105.ebuild,v 1.4 2011/11/28 11:43:41 phajdan.jr Exp $
-
-EAPI="3"
-
-MY_PV=${PV#1}
-
-DESCRIPTION="A restriction enzyme database"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="
- mirror://gentoo/${P}.tar.xz
- http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
-
-SLOT="0"
-# Minimal build keeps only the indexed files (if applicable) and the
-# documentation. The non-indexed database is not installed.
-IUSE="emboss minimal"
-LICENSE="public-domain"
-KEYWORDS="amd64 ~ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
-
-RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
-DEPEND="${RDEPEND}"
-
-RESTRICT="binchecks strip"
-
-src_compile() {
- if use emboss; then
- echo; einfo "Indexing Rebase for usage with EMBOSS."
- mkdir REBASE
- EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
- -protofile proto.${MY_PV} -equivalences \
- || die "Indexing Rebase failed."
- echo
- fi
-}
-
-src_install() {
- if ! use minimal; then
- insinto /usr/share/${PN}
- doins withrefm.${MY_PV} proto.${MY_PV} || die \
- "Failed to install raw database."
- fi
- newdoc REBASE.DOC README || die "Failed to install documentation."
- if use emboss; then
- insinto /usr/share/EMBOSS/data/REBASE
- doins REBASE/embossre.{enz,ref,sup} || die \
- "Failed to install EMBOSS data files."
- insinto /usr/share/EMBOSS/data
- doins REBASE/embossre.equ \
- || die "Failed to install enzyme prototypes file."
- fi
-}