removed old version which having problems with PYTHON ABIs stuff

(Portage version: 2.2_rc67/cvs/Linux x86_64)

5 files changed, 6 insertions, 330 deletions

diff --git a/sci-chemistry/apbs/ChangeLog b/sci-chemistry/apbs/ChangeLog
index 7a4796c22fcf..b487a7b503b1 100644
--- a/sci-chemistry/apbs/ChangeLog
+++ b/sci-chemistry/apbs/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-chemistry/apbs
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.30 2010/05/12 13:17:41 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.31 2010/06/09 06:37:14 jlec Exp $
+
+  09 Jun 2010; Justin Lecher <jlec@gentoo.org> -apbs-1.2.0.ebuild,
+  -files/apbs-1.2.0-install-fix.patch, -apbs-1.2.1b.ebuild,
+  -apbs-1.2.1b-r1.ebuild:
+  removed old version which having problems with PYTHON ABIs stuff
 
   12 May 2010; Justin Lecher (jlec) <jlec@j-schmitz.net>
   apbs-1.2.1b-r3.ebuild:
diff --git a/sci-chemistry/apbs/apbs-1.2.0.ebuild b/sci-chemistry/apbs/apbs-1.2.0.ebuild
deleted file mode 100644
index 55c69b2aac41..000000000000
--- a/sci-chemistry/apbs/apbs-1.2.0.ebuild
+++ /dev/null
@@ -1,96 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.2.0.ebuild,v 1.1 2009/11/03 05:30:06 markusle Exp $
-
-EAPI="2"
-
-inherit eutils fortran autotools python versionator flag-o-matic
-
-MY_PV=$(get_version_component_range 1-2)
-MY_P="${PN}-${MY_PV}-source"
-S="${WORKDIR}"/"${MY_P}"
-
-DESCRIPTION=" Software for evaluating the electrostatic properties of nanoscale biomolecular systems"
-LICENSE="BSD"
-HOMEPAGE="http://apbs.sourceforge.net/"
-SRC_URI="mirror://sourceforge/${PN}/${MY_P}.tar.gz"
-
-SLOT="0"
-IUSE="arpack blas doc mpi python openmp"
-KEYWORDS="~x86 ~amd64 ~ppc"
-
-DEPEND="dev-libs/maloc[mpi=]
-	blas? ( virtual/blas )
-	python? ( dev-lang/python )
-	sys-libs/readline
-	arpack? ( sci-libs/arpack )
-	mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-FORTRAN="g77 gfortran ifc"
-
-src_prepare() {
-	python_version
-
-	epatch "${FILESDIR}"/${P}-install-fix.patch
-	epatch "${FILESDIR}"/${P}-contrib.patch
-	epatch "${FILESDIR}"/${P}-link.patch
-	sed "s:GENTOO_PKG_NAME:${PN}:g" \
-	-i Makefile.am || die "Cannot correct package name"
-	eautoreconf
-}
-
-src_configure() {
-	local myconf="--docdir=/usr/share/doc/${PF}"
-	use blas && myconf="${myconf} --with-blas=-lblas"
-	use arpack && myconf="${myconf} --with-arpack=/usr/$(get_libdir)"
-
-	# check which mpi version is installed and tell configure
-	if use mpi; then
-		export CC="/usr/bin/mpicc"
-		export F77="/usr/bin/mpif77"
-
-		if has_version sys-cluster/mpich; then
-	 		myconf="${myconf} --with-mpich=/usr"
-		elif has_version sys-cluster/mpich2; then
-			myconf="${myconf} --with-mpich2=/usr"
-		elif has_version sys-cluster/lam-mpi; then
-			myconf="${myconf} --with-lam=/usr"
-		elif has_version sys-cluster/openmpi; then
-			myconf="${myconf} --with-openmpi=/usr"
-		fi
-	fi || die "Failed to select proper mpi implementation"
-
-	# apbs' configure's openmp detection is broken; we'll
-	# work around this until it is fixed
-	if use openmp; then
-		append-flags -fopenmp
-	else
-		myconf="${myconf} --disable-openmp"
-	fi
-
-	econf $(use_enable python) \
-		--disable-maloc-rebuild \
-		${myconf} || die "configure failed"
-}
-
-src_compile() {
-	emake -j1 || die "make failed"
-}
-
-src_test() {
-	cd examples && make test \
-		|| die "Tests failed"
-}
-
-src_install() {
-	emake -j1 DESTDIR="${D}" install \
-		|| die "make install failed"
-
-	dodoc AUTHORS INSTALL README NEWS ChangeLog \
-		|| die "Failed to install docs"
-
-	if use doc; then
-		dohtml -r doc/* || die "Failed to install html docs"
-	fi
-}
diff --git a/sci-chemistry/apbs/apbs-1.2.1b-r1.ebuild b/sci-chemistry/apbs/apbs-1.2.1b-r1.ebuild
deleted file mode 100644
index 6d7a0849f8fd..000000000000
--- a/sci-chemistry/apbs/apbs-1.2.1b-r1.ebuild
+++ /dev/null
@@ -1,97 +0,0 @@
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r1.ebuild,v 1.1 2010/02/20 09:33:57 jlec Exp $
-
-EAPI="3"
-
-PYTHON_DEPEND="2"
-
-inherit eutils fortran autotools python versionator flag-o-matic
-
-MY_PV=$(get_version_component_range 1-3)
-MY_P="${PN}-${MY_PV}"
-S="${WORKDIR}"/"${MY_P}-source"
-
-DESCRIPTION=" Software for evaluating the electrostatic properties of nanoscale biomolecular systems"
-LICENSE="BSD"
-HOMEPAGE="http://apbs.sourceforge.net/"
-SRC_URI="mirror://sourceforge/${PN}/${P}-source.tar.gz"
-
-SLOT="0"
-IUSE="arpack blas doc mpi python openmp"
-KEYWORDS="~x86 ~amd64 ~ppc ~amd64-linux ~x86-linux"
-
-DEPEND="dev-libs/maloc[mpi=]
-	blas? ( virtual/blas )
-	python? ( dev-lang/python )
-	sys-libs/readline
-	arpack? ( sci-libs/arpack )
-	mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-FORTRAN="g77 gfortran ifc"
-
-src_prepare() {
-	epatch "${FILESDIR}"/${PN}-1.2.0-install-fix.patch
-	epatch "${FILESDIR}"/${PN}-1.2.0-contrib.patch
-	epatch "${FILESDIR}"/${PN}-1.2.0-link.patch
-	epatch "${FILESDIR}"/${P}-autoconf-2.64.patch
-	sed "s:GENTOO_PKG_NAME:${PN}:g" \
-	-i Makefile.am || die "Cannot correct package name"
-	eautoreconf
-}
-
-src_configure() {
-	local myconf="--docdir=${EPREFIX}/usr/share/doc/${PF}"
-	use blas && myconf="${myconf} --with-blas=-lblas"
-	use arpack && myconf="${myconf} --with-arpack=${EPREFIX}/usr/$(get_libdir)"
-
-	# check which mpi version is installed and tell configure
-	if use mpi; then
-		export CC="${EPREFIX}/usr/bin/mpicc"
-		export F77="${EPREFIX}/usr/bin/mpif77"
-
-		if has_version sys-cluster/mpich; then
-	 		myconf="${myconf} --with-mpich=${EPREFIX}/usr"
-		elif has_version sys-cluster/mpich2; then
-			myconf="${myconf} --with-mpich2=${EPREFIX}/usr"
-		elif has_version sys-cluster/lam-mpi; then
-			myconf="${myconf} --with-lam=${EPREFIX}/usr"
-		elif has_version sys-cluster/openmpi; then
-			myconf="${myconf} --with-openmpi=${EPREFIX}/usr"
-		fi
-	fi || die "Failed to select proper mpi implementation"
-
-	# apbs' configure's openmp detection is broken; we'll
-	# work around this until it is fixed
-	if use openmp; then
-		append-flags -fopenmp
-	else
-		myconf="${myconf} --disable-openmp"
-	fi
-
-	econf $(use_enable python) \
-		--disable-maloc-rebuild \
-		${myconf}
-}
-
-src_compile() {
-	emake -j1 || die "make failed"
-}
-
-src_test() {
-	cd examples && make test \
-		|| die "Tests failed"
-}
-
-src_install() {
-	emake -j1 DESTDIR="${D}" install \
-		|| die "make install failed"
-
-	dodoc AUTHORS INSTALL README NEWS ChangeLog \
-		|| die "Failed to install docs"
-
-	if use doc; then
-		dohtml -r doc/* || die "Failed to install html docs"
-	fi
-}
diff --git a/sci-chemistry/apbs/apbs-1.2.1b.ebuild b/sci-chemistry/apbs/apbs-1.2.1b.ebuild
deleted file mode 100644
index 5941a7f8d10c..000000000000
--- a/sci-chemistry/apbs/apbs-1.2.1b.ebuild
+++ /dev/null
@@ -1,97 +0,0 @@
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b.ebuild,v 1.3 2010/02/20 09:33:57 jlec Exp $
-
-EAPI="2"
-
-inherit eutils fortran autotools python versionator flag-o-matic
-
-MY_PV=$(get_version_component_range 1-3)
-MY_P="${PN}-${MY_PV}"
-S="${WORKDIR}"/"${MY_P}-source"
-
-DESCRIPTION=" Software for evaluating the electrostatic properties of nanoscale biomolecular systems"
-LICENSE="BSD"
-HOMEPAGE="http://apbs.sourceforge.net/"
-SRC_URI="mirror://sourceforge/${PN}/${P}-source.tar.gz"
-
-SLOT="0"
-IUSE="arpack blas doc mpi python openmp"
-KEYWORDS="~x86 ~amd64 ~ppc"
-
-DEPEND="dev-libs/maloc[mpi=]
-	blas? ( virtual/blas )
-	python? ( dev-lang/python )
-	sys-libs/readline
-	arpack? ( sci-libs/arpack )
-	mpi? ( virtual/mpi )"
-RDEPEND="${DEPEND}"
-
-FORTRAN="g77 gfortran ifc"
-
-src_prepare() {
-	python_version
-
-	epatch "${FILESDIR}"/${PN}-1.2.0-install-fix.patch
-	epatch "${FILESDIR}"/${PN}-1.2.0-contrib.patch
-	epatch "${FILESDIR}"/${PN}-1.2.0-link.patch
-	epatch "${FILESDIR}"/${P}-autoconf-2.64.patch
-	sed "s:GENTOO_PKG_NAME:${PN}:g" \
-	-i Makefile.am || die "Cannot correct package name"
-	eautoreconf
-}
-
-src_configure() {
-	local myconf="--docdir=/usr/share/doc/${PF}"
-	use blas && myconf="${myconf} --with-blas=-lblas"
-	use arpack && myconf="${myconf} --with-arpack=/usr/$(get_libdir)"
-
-	# check which mpi version is installed and tell configure
-	if use mpi; then
-		export CC="/usr/bin/mpicc"
-		export F77="/usr/bin/mpif77"
-
-		if has_version sys-cluster/mpich; then
-	 		myconf="${myconf} --with-mpich=/usr"
-		elif has_version sys-cluster/mpich2; then
-			myconf="${myconf} --with-mpich2=/usr"
-		elif has_version sys-cluster/lam-mpi; then
-			myconf="${myconf} --with-lam=/usr"
-		elif has_version sys-cluster/openmpi; then
-			myconf="${myconf} --with-openmpi=/usr"
-		fi
-	fi || die "Failed to select proper mpi implementation"
-
-	# apbs' configure's openmp detection is broken; we'll
-	# work around this until it is fixed
-	if use openmp; then
-		append-flags -fopenmp
-	else
-		myconf="${myconf} --disable-openmp"
-	fi
-
-	econf $(use_enable python) \
-		--disable-maloc-rebuild \
-		${myconf} || die "configure failed"
-}
-
-src_compile() {
-	emake -j1 || die "make failed"
-}
-
-src_test() {
-	cd examples && make test \
-		|| die "Tests failed"
-}
-
-src_install() {
-	emake -j1 DESTDIR="${D}" install \
-		|| die "make install failed"
-
-	dodoc AUTHORS INSTALL README NEWS ChangeLog \
-		|| die "Failed to install docs"
-
-	if use doc; then
-		dohtml -r doc/* || die "Failed to install html docs"
-	fi
-}
diff --git a/sci-chemistry/apbs/files/apbs-1.2.0-install-fix.patch b/sci-chemistry/apbs/files/apbs-1.2.0-install-fix.patch
deleted file mode 100644
index 1d6f130a522a..000000000000
--- a/sci-chemistry/apbs/files/apbs-1.2.0-install-fix.patch
+++ /dev/null
@@ -1,39 +0,0 @@
-diff -Naur apbs-1.2-source/Makefile.am apbs-1.2-source.new/Makefile.am
---- apbs-1.2-source/Makefile.am	2009-10-14 13:20:55.000000000 -0400
-+++ apbs-1.2-source.new/Makefile.am	2009-11-02 23:31:41.000000000 -0500
-@@ -28,10 +28,19 @@
- 	-rm -f ./bin/apbs
- 
- install-data-local:
--	mkdir -p ${prefix}/share
--	-cp -rf examples ${prefix}/share 
--	-cp -rf doc ${prefix}/share 
--	-cp -rf tools ${prefix}/share
-+	mkdir -p $(DESTDIR)${prefix}/share/GENTOO_PKG_NAME/examples 
-+	mkdir -p $(DESTDIR)${prefix}/share/GENTOO_PKG_NAME/tools
-+	-rm -f doc/LICENSE.txt
-+	-rm -f tools/manip/*.pyc
-+	-rm -f tools/**/*.o
-+	-rm -f tools/**/Makefile*
-+	-rm -f tools/**/**/*.o
-+	-rm -f tools/**/**/Makefile*
-+	-rm -f tools/Makefile*
-+	-rm -f examples/Makefile*
-+	-rm -f examples/**/Makefile*
-+	-cp -rf examples $(DESTDIR)${prefix}/share/GENTOO_PKG_NAME/
-+	-cp -rf tools $(DESTDIR)${prefix}/share/GENTOO_PKG_NAME/
- 
- test:
- 	cd examples; make test
-diff -Naur apbs-1.2-source/bin/Makefile.am apbs-1.2-source.new/bin/Makefile.am
---- apbs-1.2-source/bin/Makefile.am	2009-10-14 13:20:48.000000000 -0400
-+++ apbs-1.2-source.new/bin/Makefile.am	2009-11-02 23:31:15.000000000 -0500
-@@ -40,6 +40,4 @@
- include_HEADERS = routines.h
- 	
- install-data-local:
--	-cp -p ${top_apbsdir}/bin/ApbsClient.py ${prefix}/bin
--	-chmod 755 ${prefix}/bin/ApbsClient.py
--	-rm -f ${prefix}/bin/wsdl2py 
-\ No newline at end of file
-+	-rm -f $(DESTDIR)${prefix}/bin/wsdl2py