diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2010-06-28 04:48:15 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2010-06-28 04:48:15 +0000 |
| commit | f5f505093eec6f6982275cf48ed20a1224336df2 (patch) | |
| tree | 38c49f5cdf078d685ab601ec7130b7973b491555 /sci-chemistry/refmac/files | |
| parent | Old. (diff) | |
| download | gentoo-2-f5f505093eec6f6982275cf48ed20a1224336df2.tar.gz gentoo-2-f5f505093eec6f6982275cf48ed20a1224336df2.tar.bz2 gentoo-2-f5f505093eec6f6982275cf48ed20a1224336df2.zip | |
Version Bump
(Portage version: 2.2_rc67/cvs/Linux x86_64)
Diffstat (limited to 'sci-chemistry/refmac/files')
| -rw-r--r-- | sci-chemistry/refmac/files/5.6.0078-allow-dynamic-linking.patch | 82 |
1 files changed, 82 insertions, 0 deletions
diff --git a/sci-chemistry/refmac/files/5.6.0078-allow-dynamic-linking.patch b/sci-chemistry/refmac/files/5.6.0078-allow-dynamic-linking.patch new file mode 100644 index 000000000000..b1d74de4bbb5 --- /dev/null +++ b/sci-chemistry/refmac/files/5.6.0078-allow-dynamic-linking.patch @@ -0,0 +1,82 @@ +diff --git a/makefile_refmac.inc1 b/makefile_refmac.inc1 +index 3f858c8..8b32cab 100644 +--- a/makefile_refmac.inc1 ++++ b/makefile_refmac.inc1 +@@ -89,9 +89,7 @@ messy_pdb.o \ + bridge.o \ + i0.o \ + i1.o \ +-chbevl.o \ +-$(LLIBCIF) \ +-$(LLIBLAPACK) ++chbevl.o + + + SUBL = \ +@@ -124,9 +122,7 @@ cell_symm_subrs.o \ + iheap_sort.o \ + linalgebra.o \ + math_refmac.o \ +-subnumrec.o \ +-$(LLIBLAPACK) \ +-$(LLIBCCP) ++subnumrec.o + + #-------------------------------------------------------------------------------- + +@@ -150,7 +146,7 @@ twin77mod.o: twin77mod.f + $(FC) $(FFLAGS) -c twin77mod.f + + +-optimise_solvent_all.o: optimise_solvent_all.f90 ++optimise_solvent_all.o: optimise_solvent_all.f90 atomf77mod.o + $(FC) $(FFLAGS) -c optimise_solvent_all.f90 + + ncs_rest.o: ncs_ncs_generate.f90 ncs_rest.f +@@ -178,7 +174,7 @@ align_refmac.o: align_refmac.f90 + $(FC) $(FFLAGS) -c align_refmac.f90 + + +-hkon_secder_tch.o: hkon_secder_tch.f local_tls.f90 ncs_simil.f90 optimise_solvent_all.f90 ++hkon_secder_tch.o: hkon_secder_tch.f local_tls.f90 ncs_simil.f90 optimise_solvent_all.f90 optimise_solvent_all.o + $(FC) $(FFLAGS) -c optimise_solvent_all.f90 ncs_simil.f90 local_tls.f90 hkon_secder_tch.f + + oppro_allocate.o: oppro_allocate.f filter_params.f90 optimise_solvent_all.f90 +@@ -220,8 +216,8 @@ refall_twin.o: refall_twin.f optimise_solvent_all.f90 + rharvest.o: rharvest.f optimise_solvent_all.f90 + $(FC) $(FFLAGS) -c optimise_solvent_all.f90 rharvest.f + +-solvent_contr_mask.o: solvent_contr_mask.f optimise_solvent_all.f90 +- $(FC) $(FFLAGS) -c optimise_solvent_all.f90 solvent_contr_mask.f ++solvent_contr_mask.o: solvent_contr_mask.f optimise_solvent_all.f90 atomf77mod.o ++ $(FC) $(FFLAGS) -c atomf77mod.f optimise_solvent_all.f90 solvent_contr_mask.f + + subag_scale_hessian.o: subag_scale_hessian.f optimise_solvent_all.f90 + $(FC) $(FFLAGS) -c optimise_solvent_all.f90 subag_scale_hessian.f +@@ -229,7 +225,7 @@ subag_scale_hessian.o: subag_scale_hessian.f optimise_solvent_all.f90 + subcf_scale1.o: subcf_scale1.f optimise_solvent_all.f90 + $(FC) $(FFLAGS) -c optimise_solvent_all.f90 subcf_scale1.f + +-refmac_xml.o: refmac_xml.f optimise_solvent_all.f90 ++refmac_xml.o: refmac_xml.f optimise_solvent_all.f90 optimise_solvent_all.o + $(FC) $(FFLAGS) -c optimise_solvent_all.f90 refmac_xml.f + + hkl_pack.o: hkl_pack.f90 +@@ -239,7 +235,7 @@ subvag.o: subvag.f hkl_pack.f90 + $(FC) $(FFLAGS) -c hkl_pack.f90 subvag.f + + refmac: $(SUBR) +- $(FC) $(FFLAGS) -o refmac${VERSION} ${SUBR} $(LLIBOTHERS) $(LLIBCCP) ++ $(FC) $(FFLAGS) $(LDFLAGS) -o refmac${VERSION} ${SUBR} $(LLIBOTHERS) $(LLIBCCP) $(LLIBCIF) $(LLIBLAPACK) + + mol2_file.o: mol2_file.f odb_files.f90 + $(FC) $(FFLAGS) -c odb_files.f90 mol2_file.f +@@ -260,7 +256,7 @@ libcheck.o: libcheck.f elements_module.f90 pdb2libcheck.f90 + $(FC) $(FFLAGS) -c elements_module.f90 pdb2libcheck.f90 libcheck.f + + libcheck: $(SUBL) +- $(FC) $(FFLAGS) -o libcheck${VERSION} $(SUBL) ++ $(FC) $(FFLAGS) $(LDFLAGS) -o libcheck${VERSION} $(SUBL) $(LLIBCCP) $(LLIBCIF) $(LLIBLAPACK) + + clean: + /bin/rm *.o |