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Diffstat (limited to 'sci-chemistry/pymol-plugins-msms/pymol-plugins-msms-100415-r1.ebuild')
| -rw-r--r-- | sci-chemistry/pymol-plugins-msms/pymol-plugins-msms-100415-r1.ebuild | 42 |
1 files changed, 42 insertions, 0 deletions
diff --git a/sci-chemistry/pymol-plugins-msms/pymol-plugins-msms-100415-r1.ebuild b/sci-chemistry/pymol-plugins-msms/pymol-plugins-msms-100415-r1.ebuild new file mode 100644 index 000000000000..aadcea514255 --- /dev/null +++ b/sci-chemistry/pymol-plugins-msms/pymol-plugins-msms-100415-r1.ebuild @@ -0,0 +1,42 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-plugins-msms/pymol-plugins-msms-100415-r1.ebuild,v 1.1 2013/12/02 11:10:59 jlec Exp $ + +EAPI=5 + +PYTHON_COMPAT=( python2_7 ) + +inherit eutils python-r1 + +DESCRIPTION="GUI for MSMS and displaying its results in PyMOL" +HOMEPAGE="http://www.biotec.tu-dresden.de/~hongboz/msms_pymol/msms_pymol.html" +SRC_URI="http://www.biotec.tu-dresden.de/~hongboz/msms_pymol/pymol_script/msms_pymol.py -> ${P}.py" + +SLOT="0" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +LICENSE="BSD pymol" +IUSE="" + +RDEPEND=" + sci-chemistry/msms-bin + sci-chemistry/pymol[${PYTHON_USEDEP}]" +DEPEND="${RDEPEND}" + +src_unpack() { + mkdir "${S}" || die + cp "${DISTDIR}"/${A} "${S}/" || die +} + +src_prepare() { + epatch "${FILESDIR}"/${PV}-msms.patch + sed \ + -e "s:GENTOOMSMS:${EPREFIX}/opt/bin/msms:g" \ + -e "s:GENTOOXYZRN:${EPREFIX}/usr/bin/pdb_to_xyzrn:g" \ + -i ${A} || die +} + +src_install() { + python_moduleinto pmg_tk/startup + python_parallel_foreach_impl python_domodule ${P}.py + python_parallel_foreach_impl python_optimize +} |