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| author |   Michael Schubert <mschu.dev@gmail.com> | 2024-06-12 11:21:56 +0000 |
|---|---|---|
| committer |   Andrew Ammerlaan <andrewammerlaan@gentoo.org> | 2024-06-19 11:24:02 +0200 |
| commit | 968ecda4bf1c56d55a2812fc8f9a2a4918030255 (patch) | |
| tree | ee8db8f55c980e99a48aba7ac413abf6d29c643e | |
| parent | */*: drop distutils_enable_tests --install (diff) | |
| download | sci-968ecda4bf1c56d55a2812fc8f9a2a4918030255.tar.gz sci-968ecda4bf1c56d55a2812fc8f9a2a4918030255.tar.bz2 sci-968ecda4bf1c56d55a2812fc8f9a2a4918030255.zip | |
sci-biology/multiqc: version bump 1.22.2
Signed-off-by: Michael Schubert <mschu.dev@gmail.com>
Closes: https://github.com/gentoo/sci/pull/1277
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
| -rw-r--r-- | profiles/package.mask | 4 | ||||
| -rw-r--r-- | sci-biology/multiqc/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/multiqc/multiqc-1.19.ebuild | 40 | ||||
| -rw-r--r-- | sci-biology/multiqc/multiqc-1.22.2.ebuild | 42 |
4 files changed, 43 insertions, 45 deletions
diff --git a/profiles/package.mask b/profiles/package.mask index 48068ccf9..1b622a85b 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -31,8 +31,4 @@ #--- END OF EXAMPLES --- # Andrew Ammerlaan <andrewammerlaan@gentoo.org> (2024-04-24) -# Dependencies dev-python/future removed -sci-biology/multiqc - -# Andrew Ammerlaan <andrewammerlaan@gentoo.org> (2024-04-24) # reverse deps diff --git a/sci-biology/multiqc/Manifest b/sci-biology/multiqc/Manifest index 3585038a3..77bfbc723 100644 --- a/sci-biology/multiqc/Manifest +++ b/sci-biology/multiqc/Manifest @@ -1 +1 @@ -DIST multiqc-1.19.tar.gz 1159781 BLAKE2B 32d592dba5675f8cb673c8fced9f8ed32977ecd2baf1407aff4ef16b88d8bdad6a9541748717b90d5ab755f6354166e2de62cb1abd282d0e5ce9d1c89529d249 SHA512 75ef5a1b6c6433d68b878e2a1d51b6f420b8c77831cb1279a0b87aff5d6dee7a65bcca5d1f4deb04d4957feef0f27a1155198e244bd165404b08a23bfc8a9354 +DIST multiqc-1.22.2.gh.tar.gz 5611004 BLAKE2B 238af92830fe903b09651701072053a4d09de7ff626894b51d246ac53c02e86955690d3b072961833648574ae07412f03fdafd0f39e629c574eb0346cdd95710 SHA512 cf4a448bd353cbd38e7f585c9c62f68481d3fa919edf0a974d3448782134e14e6f210cedbac0e59235a2813166d07b9a407e17e7eb1904176406cc4326182699 diff --git a/sci-biology/multiqc/multiqc-1.19.ebuild b/sci-biology/multiqc/multiqc-1.19.ebuild deleted file mode 100644 index 187f06c22..000000000 --- a/sci-biology/multiqc/multiqc-1.19.ebuild +++ /dev/null @@ -1,40 +0,0 @@ -# Copyright 1999-2023 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -DISTUTILS_USE_PEP517=setuptools -PYTHON_COMPAT=( python3_{10..11} ) - -inherit pypi distutils-r1 - -DESCRIPTION="Aggregate bioinformatics results across many samples into a single report" -HOMEPAGE="https://multiqc.info/" - -LICENSE="GPL-3" -SLOT="0" -KEYWORDS="~amd64 ~amd64-linux" - -RDEPEND="dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/networkx[${PYTHON_USEDEP}] - dev-python/numpy[${PYTHON_USEDEP}] - dev-python/click[${PYTHON_USEDEP}] - dev-python/coloredlogs[${PYTHON_USEDEP}] - dev-python/future[${PYTHON_USEDEP}] - dev-python/jinja[${PYTHON_USEDEP}] - dev-python/lzstring[${PYTHON_USEDEP}] - dev-python/markdown[${PYTHON_USEDEP}] - dev-python/packaging[${PYTHON_USEDEP}] - dev-python/pyyaml[${PYTHON_USEDEP}] - dev-python/requests[${PYTHON_USEDEP}] - dev-python/rich[${PYTHON_USEDEP}] - dev-python/rich-click[${PYTHON_USEDEP}] - dev-python/simplejson[${PYTHON_USEDEP}] - dev-python/spectra[${PYTHON_USEDEP}] - dev-python/importlib-metadata[$PYTHON_USEDEP] - dev-python/humanize[$PYTHON_USEDEP] - dev-python/pyaml-env[$PYTHON_USEDEP]" - -# pypi tarball does not include tests -RESTRICT="test" -#distutils_enable_tests pytest diff --git a/sci-biology/multiqc/multiqc-1.22.2.ebuild b/sci-biology/multiqc/multiqc-1.22.2.ebuild new file mode 100644 index 000000000..bf45065aa --- /dev/null +++ b/sci-biology/multiqc/multiqc-1.22.2.ebuild @@ -0,0 +1,42 @@ +# Copyright 1999-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +DISTUTILS_USE_PEP517=setuptools +PYTHON_COMPAT=( python3_{10..12} ) + +inherit distutils-r1 + +DESCRIPTION="Aggregate bioinformatics results across many samples into a single report" +HOMEPAGE="https://multiqc.info/" +SRC_URI="https://github.com/MultiQC/MultiQC/archive/refs/tags/v${PV}.tar.gz -> ${P}.gh.tar.gz" +S="${WORKDIR}"/MultiQC-${PV} + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~amd64 ~amd64-linux" + +RDEPEND="dev-python/click[${PYTHON_USEDEP}] + dev-python/humanize[${PYTHON_USEDEP}] + dev-python/importlib-metadata[${PYTHON_USEDEP}] + >=dev-python/jinja-3.0.0[${PYTHON_USEDEP}] + dev-python/markdown[${PYTHON_USEDEP}] + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/packaging[${PYTHON_USEDEP}] + dev-python/requests[${PYTHON_USEDEP}] + >=dev-python/pillow-10[${PYTHON_USEDEP}] + >=dev-python/plotly-5.18[${PYTHON_USEDEP}] + >=dev-python/pyyaml-4[${PYTHON_USEDEP}] + dev-python/pyaml-env[${PYTHON_USEDEP}] + >=dev-python/rich-10[${PYTHON_USEDEP}] + dev-python/rich-click[${PYTHON_USEDEP}] + dev-python/coloredlogs[${PYTHON_USEDEP}] + dev-python/tqdm[${PYTHON_USEDEP}] + >=dev-python/spectra-0.0.10[${PYTHON_USEDEP}] + >=dev-python/pydantic-2.7.1[${PYTHON_USEDEP}] + dev-python/typeguard[${PYTHON_USEDEP}]" +# dev-python/kaleido[${PYTHON_USEDEP}] # tested and is optional + +RESTRICT="test" # no items collected +#distutils_enable_tests pytest |