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| author |   David Seifert <soap@gentoo.org> | 2016-09-24 16:20:44 +0200 |
|---|---|---|
| committer | David Seifert <soap@gentoo.org> | 2016-09-24 21:02:03 +0200 |
| commit | 5bd35d2287f51fa70024ffc977d34d8e15d8a168 (patch) | |
| tree | 9141639353fe4380e7363951f843fd57a810108b /sci-biology/eugene/eugene-4.1d.ebuild | |
| parent | dev-perl/XML-SAX-Writer: Remove old (diff) | |
| download | gentoo-5bd35d2287f51fa70024ffc977d34d8e15d8a168.tar.gz gentoo-5bd35d2287f51fa70024ffc977d34d8e15d8a168.tar.bz2 gentoo-5bd35d2287f51fa70024ffc977d34d8e15d8a168.zip | |
sci-biology/eugene: Bump to 4.1d from science-overlay
Gentoo-bug: 594700
* EAPI=6
* Fix -Wformat warnings
Package-Manager: portage-2.3.1
Diffstat (limited to 'sci-biology/eugene/eugene-4.1d.ebuild')
| -rw-r--r-- | sci-biology/eugene/eugene-4.1d.ebuild | 42 |
1 files changed, 42 insertions, 0 deletions
diff --git a/sci-biology/eugene/eugene-4.1d.ebuild b/sci-biology/eugene/eugene-4.1d.ebuild new file mode 100644 index 000000000000..55a73bc3c4cd --- /dev/null +++ b/sci-biology/eugene/eugene-4.1d.ebuild @@ -0,0 +1,42 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=6 + +inherit autotools + +DESCRIPTION="Prokaryotic and Eukaryotic gene predictor" +HOMEPAGE="http://eugene.toulouse.inra.fr/" +SRC_URI="https://mulcyber.toulouse.inra.fr/frs/download.php/1359/${P}.tar.gz" + +LICENSE="Artistic" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +DEPEND=" + media-libs/gd[png] + media-libs/libpng:0= + " +RDEPEND="${DEPEND}" + +RESTRICT="test" + +PATCHES=( + # https://mulcyber.toulouse.inra.fr/tracker/index.php?func=detail&aid=1170 + "${FILESDIR}"/${PN}-3.6-overflow.patch + "${FILESDIR}"/${PN}-3.6-plugins.patch + "${FILESDIR}"/${PN}-4.1-format-security.patch + "${FILESDIR}"/${PN}-4.1d-fix-c++14.patch + "${FILESDIR}"/${PN}-4.1d-Wformat.patch +) + +src_prepare() { + default + sed \ + -e '/SUBDIRS/ s/doc//' \ + -e '/INSTALL.*doc/ s/\(.*\)//' \ + -i Makefile.am || die + eautoreconf +} |