diff options
| author |   David Seifert <soap@gentoo.org> | 2021-10-11 16:55:09 +0200 |
|---|---|---|
| committer | David Seifert <soap@gentoo.org> | 2021-10-11 16:55:09 +0200 |
| commit | 0c0f7543e2f922af5b5198b2abb6d9c32b6be5cb (patch) | |
| tree | 8a4971bedc30bb0539acfa2508e853d22db85613 /sci-biology | |
| parent | sci-biology/pysam: drop 0.16.0.1-r1 (diff) | |
| download | gentoo-0c0f7543e2f922af5b5198b2abb6d9c32b6be5cb.tar.gz gentoo-0c0f7543e2f922af5b5198b2abb6d9c32b6be5cb.tar.bz2 gentoo-0c0f7543e2f922af5b5198b2abb6d9c32b6be5cb.zip | |
sci-biology/bcftools: drop 1.10.2
Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/bcftools/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/bcftools/bcftools-1.10.2.ebuild | 43 |
2 files changed, 0 insertions, 44 deletions
diff --git a/sci-biology/bcftools/Manifest b/sci-biology/bcftools/Manifest index 958ce72a852c..bfc2b78ed049 100644 --- a/sci-biology/bcftools/Manifest +++ b/sci-biology/bcftools/Manifest @@ -1,2 +1 @@ -DIST bcftools-1.10.2.tar.bz2 3702679 BLAKE2B 51acce94d463868562199206504dc8afb50c671c11139c5a96f52cedf135bb7a46115c69411b9943b970a2395e3c866275c85e345a4a40a90194d1094698314e SHA512 f07e405efa16b9b1b18521342df3eaf840ed1b3028b736a6b4d139012ea85769ddfb3cd3a2c94958415d984d07805dfcd3d4bbec0db401b3f071b861a56d1300 DIST bcftools-1.13.tar.bz2 6906796 BLAKE2B 4c02d65733d28684f9a976e082913d79dbac4463c9471fc26d8ee0cbe7ad25af429cf7d01b9771bc34309386ccd2d77ebd54fbf64ed4183d1c2ebfbc0e727afb SHA512 aa533233dd2fec2279859204be39430c4fc630137a91d57fe917fd7a220044d5202ddc3d44bcffc3bd5bd5bb64f6ea4c8ec3c31e5e1ec72399998f1e6f23a55a diff --git a/sci-biology/bcftools/bcftools-1.10.2.ebuild b/sci-biology/bcftools/bcftools-1.10.2.ebuild deleted file mode 100644 index a484f69133e5..000000000000 --- a/sci-biology/bcftools/bcftools-1.10.2.ebuild +++ /dev/null @@ -1,43 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python3_{8..9} ) - -inherit python-single-r1 - -DESCRIPTION="Utilities for variant calling and manipulating VCF and BCF files" -HOMEPAGE="http://www.htslib.org" -SRC_URI="https://github.com/samtools/${PN}/releases/download/${PV}/${P}.tar.bz2" - -LICENSE="MIT" -SLOT="0" -KEYWORDS="~amd64 ~x86" -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -RDEPEND=" - dev-lang/perl - $(python_gen_cond_dep ' - dev-python/matplotlib[${PYTHON_USEDEP}] - ') - =sci-libs/htslib-${PV}*:= - sys-libs/zlib:= - ${PYTHON_DEPS}" -DEPEND="${RDEPEND}" - -src_prepare() { - default - - python_fix_shebang misc/{guess-ploidy,plot-roh}.py - - # remove bundled htslib - rm -r htslib-* || die -} - -src_configure() { - econf \ - --disable-bcftools-plugins \ - --disable-libgsl \ - --with-htslib=system -} |