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| author |   Jon Portnoy <avenj@gentoo.org> | 2003-04-24 00:09:45 +0000 |
|---|---|---|
| committer | Jon Portnoy <avenj@gentoo.org> | 2003-04-24 00:09:45 +0000 |
| commit | 66c122eb2056c9cd6d5edc4b4cf3a5cac40cf235 (patch) | |
| tree | 02ae3b8e21a66ff77b304861be81eeea156eb637 /app-sci/phylip | |
| parent | Initial import of phylip - thanks sediener! (diff) | |
| download | historical-66c122eb2056c9cd6d5edc4b4cf3a5cac40cf235.tar.gz historical-66c122eb2056c9cd6d5edc4b4cf3a5cac40cf235.tar.bz2 historical-66c122eb2056c9cd6d5edc4b4cf3a5cac40cf235.zip | |
Initial import of phylip - thanks sediener!
Diffstat (limited to 'app-sci/phylip')
| -rw-r--r-- | app-sci/phylip/Manifest | 3 | ||||
| -rw-r--r-- | app-sci/phylip/files/digest-phylip-3.5 | 1 | ||||
| -rw-r--r-- | app-sci/phylip/phylip-3.5.ebuild | 39 |
3 files changed, 42 insertions, 1 deletions
diff --git a/app-sci/phylip/Manifest b/app-sci/phylip/Manifest index 938250716040..79d9599e6ea0 100644 --- a/app-sci/phylip/Manifest +++ b/app-sci/phylip/Manifest @@ -1,2 +1,3 @@ -MD5 7ea373ef78f2324387169ad38e29ef42 phylip-3.5.ebuild 1388 +MD5 9b3bd37d3a745264df679daf2c52efcf phylip-3.5.ebuild 1482 +MD5 548ace8a77658c0de6139acdc96655e9 ChangeLog 398 MD5 cfa8a22ac65037bfe8dfefda7c4171f5 files/digest-phylip-3.5 57 diff --git a/app-sci/phylip/files/digest-phylip-3.5 b/app-sci/phylip/files/digest-phylip-3.5 new file mode 100644 index 000000000000..d8a2c6e6b732 --- /dev/null +++ b/app-sci/phylip/files/digest-phylip-3.5 @@ -0,0 +1 @@ +MD5 d437d19d82fd84c723a73b6420aae4fc phylip.tar.Z 932516 diff --git a/app-sci/phylip/phylip-3.5.ebuild b/app-sci/phylip/phylip-3.5.ebuild new file mode 100644 index 000000000000..44032a816af0 --- /dev/null +++ b/app-sci/phylip/phylip-3.5.ebuild @@ -0,0 +1,39 @@ +# Copyright 1999-2003 Gentoo Technologies, Inc. +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/app-sci/phylip/phylip-3.5.ebuild,v 1.1 2003/04/24 00:09:33 avenj Exp $ + +DESCRIPTION="PHYLIP (the PHYLogeny Inference Package) is a package of programs for inferring phylogenies (evolutionary trees)" + +HOMEPAGE="http://evolution.genetics.washington.edu/phylip.html" +SRC_URI="ftp://evolution.genetics.washington.edu/pub/phylip/${PN}.tar.Z" + +LICENSE="freedist" +SLOT="0" +KEYWORDS="~x86" +IUSE="" +DEPEND="" + +src_compile() { + cd ${WORKDIR} + # uses only makefile. + EXTRA_EMAKE="-e ${CFLAGS}" + emake || die +} +src_install() +{ + cd ${WORKDIR} + dobin clique consense contml contrast dnacomp dnadist dnainvar + dobin dnaml dnamlk dnamove dnapars dnapenny dollop dolmove dolpenny + dobin drawgram drawtree factor fitch gendist kitsch mix move neighbor + dobin penny protdist protpars restml retree seqboot + + dodoc README clique.doc dnadist.doc dolmove.doc + dodoc kitsch.doc protml.doc consense.doc dnainvar.doc + dodoc dolpenny.doc main.doc protpars.doc contchar.doc + dodoc dnaml.doc draw.doc makeinf.doc restml.doc contml.doc + dodoc dnamlk.doc drawgram.doc + dodoc mix.doc retree.doc contrast.doc dnamove.doc drawtree.doc + dodoc move.doc seqboot.doc discrete.doc dnapars.doc factor.doc + dodoc neighbor.doc sequence.doc distance.doc dnapenny.doc fitch.doc + dodoc penny.doc dnacomp.doc dollop.doc gendist.doc protdist.doc +} |