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authorAndrey Kislyuk <weaver@gentoo.org>2011-02-03 01:01:41 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2011-02-03 01:01:41 +0000
commit0f43f1a718bf992d2eae0899a6086b44ec615801 (patch)
treea143e137fdb8ad9a5e200601ed586cbbd2b299d6 /sci-biology/augustus
parentVersion bump, update license (diff)
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Version bump, update SRC_URI
Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/augustus')
-rw-r--r--sci-biology/augustus/ChangeLog10
-rw-r--r--sci-biology/augustus/augustus-2.4.ebuild6
-rw-r--r--sci-biology/augustus/augustus-2.5.ebuild35
3 files changed, 46 insertions, 5 deletions
diff --git a/sci-biology/augustus/ChangeLog b/sci-biology/augustus/ChangeLog
index f31a81fa96ea..ba50910a1eba 100644
--- a/sci-biology/augustus/ChangeLog
+++ b/sci-biology/augustus/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for sci-biology/augustus
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/ChangeLog,v 1.10 2010/09/26 07:49:33 weaver Exp $
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/ChangeLog,v 1.11 2011/02/03 01:01:41 weaver Exp $
+
+*augustus-2.5 (03 Feb 2011)
+
+ 03 Feb 2011; Andrey Kislyuk <weaver@gentoo.org> augustus-2.4.ebuild,
+ +augustus-2.5.ebuild:
+ Version bump, update SRC_URI
*augustus-2.4 (26 Sep 2010)
diff --git a/sci-biology/augustus/augustus-2.4.ebuild b/sci-biology/augustus/augustus-2.4.ebuild
index e8f56e9346e9..501d026fca86 100644
--- a/sci-biology/augustus/augustus-2.4.ebuild
+++ b/sci-biology/augustus/augustus-2.4.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2010 Gentoo Foundation
+# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/augustus-2.4.ebuild,v 1.1 2010/09/26 07:49:33 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/augustus-2.4.ebuild,v 1.2 2011/02/03 01:01:41 weaver Exp $
EAPI="2"
@@ -8,7 +8,7 @@ inherit base eutils
DESCRIPTION="Eukaryotic gene predictor"
HOMEPAGE="http://augustus.gobics.de/"
-SRC_URI="http://augustus.gobics.de/binaries/${PN}.${PV}.src.tar.gz"
+SRC_URI="http://augustus.gobics.de/binaries/old/${PN}.${PV}.src.tar.gz"
LICENSE="Artistic"
SLOT="0"
diff --git a/sci-biology/augustus/augustus-2.5.ebuild b/sci-biology/augustus/augustus-2.5.ebuild
new file mode 100644
index 000000000000..5861ddae965f
--- /dev/null
+++ b/sci-biology/augustus/augustus-2.5.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2011 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/augustus-2.5.ebuild,v 1.1 2011/02/03 01:01:41 weaver Exp $
+
+EAPI="2"
+
+inherit base eutils
+
+DESCRIPTION="Eukaryotic gene predictor"
+HOMEPAGE="http://augustus.gobics.de/"
+SRC_URI="http://augustus.gobics.de/binaries/${PN}.${PV}.tar.gz"
+
+LICENSE="Artistic"
+SLOT="0"B
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=""
+RDEPEND=""
+
+S="${WORKDIR}/${PN}.${PV}"
+
+src_compile() {
+ emake -C src clean || die
+ emake -C src || die
+}
+
+src_install() {
+ dobin src/{augustus,etraining,consensusFinder,curve2hints} || die
+ insinto /usr/share/${PN}
+ doins -r config examples scripts docs || die
+ echo "AUGUSTUS_CONFIG_PATH=\"/usr/share/${PN}/config\"" > "${S}/99${PN}"
+ doenvd "${S}/99${PN}" || die
+ dodoc README.TXT HISTORY.TXT docs/*
+}