diff options
author | Andrey Kislyuk <weaver@gentoo.org> | 2011-02-03 01:01:41 +0000 |
---|---|---|
committer | Andrey Kislyuk <weaver@gentoo.org> | 2011-02-03 01:01:41 +0000 |
commit | 0f43f1a718bf992d2eae0899a6086b44ec615801 (patch) | |
tree | a143e137fdb8ad9a5e200601ed586cbbd2b299d6 /sci-biology/augustus | |
parent | Version bump, update license (diff) | |
download | historical-0f43f1a718bf992d2eae0899a6086b44ec615801.tar.gz historical-0f43f1a718bf992d2eae0899a6086b44ec615801.tar.bz2 historical-0f43f1a718bf992d2eae0899a6086b44ec615801.zip |
Version bump, update SRC_URI
Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/augustus')
-rw-r--r-- | sci-biology/augustus/ChangeLog | 10 | ||||
-rw-r--r-- | sci-biology/augustus/augustus-2.4.ebuild | 6 | ||||
-rw-r--r-- | sci-biology/augustus/augustus-2.5.ebuild | 35 |
3 files changed, 46 insertions, 5 deletions
diff --git a/sci-biology/augustus/ChangeLog b/sci-biology/augustus/ChangeLog index f31a81fa96ea..ba50910a1eba 100644 --- a/sci-biology/augustus/ChangeLog +++ b/sci-biology/augustus/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/augustus -# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/ChangeLog,v 1.10 2010/09/26 07:49:33 weaver Exp $ +# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/ChangeLog,v 1.11 2011/02/03 01:01:41 weaver Exp $ + +*augustus-2.5 (03 Feb 2011) + + 03 Feb 2011; Andrey Kislyuk <weaver@gentoo.org> augustus-2.4.ebuild, + +augustus-2.5.ebuild: + Version bump, update SRC_URI *augustus-2.4 (26 Sep 2010) diff --git a/sci-biology/augustus/augustus-2.4.ebuild b/sci-biology/augustus/augustus-2.4.ebuild index e8f56e9346e9..501d026fca86 100644 --- a/sci-biology/augustus/augustus-2.4.ebuild +++ b/sci-biology/augustus/augustus-2.4.ebuild @@ -1,6 +1,6 @@ -# Copyright 1999-2010 Gentoo Foundation +# Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/augustus-2.4.ebuild,v 1.1 2010/09/26 07:49:33 weaver Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/augustus-2.4.ebuild,v 1.2 2011/02/03 01:01:41 weaver Exp $ EAPI="2" @@ -8,7 +8,7 @@ inherit base eutils DESCRIPTION="Eukaryotic gene predictor" HOMEPAGE="http://augustus.gobics.de/" -SRC_URI="http://augustus.gobics.de/binaries/${PN}.${PV}.src.tar.gz" +SRC_URI="http://augustus.gobics.de/binaries/old/${PN}.${PV}.src.tar.gz" LICENSE="Artistic" SLOT="0" diff --git a/sci-biology/augustus/augustus-2.5.ebuild b/sci-biology/augustus/augustus-2.5.ebuild new file mode 100644 index 000000000000..5861ddae965f --- /dev/null +++ b/sci-biology/augustus/augustus-2.5.ebuild @@ -0,0 +1,35 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/augustus/augustus-2.5.ebuild,v 1.1 2011/02/03 01:01:41 weaver Exp $ + +EAPI="2" + +inherit base eutils + +DESCRIPTION="Eukaryotic gene predictor" +HOMEPAGE="http://augustus.gobics.de/" +SRC_URI="http://augustus.gobics.de/binaries/${PN}.${PV}.tar.gz" + +LICENSE="Artistic" +SLOT="0"B +IUSE="" +KEYWORDS="~amd64 ~x86" + +DEPEND="" +RDEPEND="" + +S="${WORKDIR}/${PN}.${PV}" + +src_compile() { + emake -C src clean || die + emake -C src || die +} + +src_install() { + dobin src/{augustus,etraining,consensusFinder,curve2hints} || die + insinto /usr/share/${PN} + doins -r config examples scripts docs || die + echo "AUGUSTUS_CONFIG_PATH=\"/usr/share/${PN}/config\"" > "${S}/99${PN}" + doenvd "${S}/99${PN}" || die + dodoc README.TXT HISTORY.TXT docs/* +} |