Version bump, drop old

Package-Manager: portage-2.2_rc86/cvs/Linux x86_64

4 files changed, 52 insertions, 8 deletions

diff --git a/sci-biology/bioperl-db/Manifest b/sci-biology/bioperl-db/Manifest
index 102c006f54ab..8c06314d31f5 100644
--- a/sci-biology/bioperl-db/Manifest
+++ b/sci-biology/bioperl-db/Manifest
@@ -1,5 +1,17 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
+DIST BioPerl-DB-1.006900.tar.gz 492799 RMD160 28e53c747022e0f91485370c4ab03a3fb4c0480c SHA1 4a4508dced08aac65cc362148fd597fddbec1cf9 SHA256 50df2447b7f3e26aebcf02ed7344d3ef562c3f5393c1584a8ae086185c8c9139
 DIST BioPerl-db-1.6.0.tar.bz2 296041 RMD160 6cae2b39b4e46b30f7f378e22ca565fb9f9cfbeb SHA1 7bbfe5ef163dca332531372dd728161e89bd7bb8 SHA256 81710b9c6d021511b8ad19d106309f76ef3111015873a56af9b109902d24a699
 EBUILD bioperl-db-1.6.0.ebuild 934 RMD160 3174e0d009ef1a97f67afb510156b0c0f07ede03 SHA1 bc1de7c9c854933a884fdcb977ef2c225b8bdf91 SHA256 09aadf2bd39f97517e6743bcc179812133f7f35bf5feabf3dd21f5a638c374a5
+EBUILD bioperl-db-1.6.9.ebuild 739 RMD160 d94c2a0e0c3dfb6fc8fe07e80295b4c7a43876c1 SHA1 b51cb6a0685a815f9b0342c37d87d936a894f378 SHA256 9ffd2a0f5c5b3d1e558085697955f1c5bcecd82f586da7d89c4ba249c067f8cf
 EBUILD bioperl-db-9999-r1.ebuild 934 RMD160 d54adbeb27dea092acc00011df5413f17502683a SHA1 8333aebcccfd6541eac7d5da5883da079d52562f SHA256 b9ab055cf75c3748f4ea8dd7f5426e85d036baa34002bac7710cea5e0b03837e
-MISC ChangeLog 1070 RMD160 64a3a66f81cf0141e222a0fe07bdb8387c8f0370 SHA1 1b80006232a210428cef6508c57bae0c3507148f SHA256 e068bc8227908707f652ebf342d1090b7915108a7113e1bf40bc1b5598bee00f
+MISC ChangeLog 1205 RMD160 c5b6a503673d3ef9bd035801b66212f0b1b38e3d SHA1 58d44aa8a220e5cfb76c696ddd057e4eef7ec3ea SHA256 522f6bfbc3e18ea86eb1b9e59b984dd88fe396f7ef614f61573c3f76843cec9f
 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v1.4.11 (GNU/Linux)
+
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+iCMAn0ksa6R0ElgPLZNZszrf3z04KjVN
+=RzC3
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/bioperl-network/Manifest b/sci-biology/bioperl-network/Manifest
index 61066f4b3e57..69440a973a2c 100644
--- a/sci-biology/bioperl-network/Manifest
+++ b/sci-biology/bioperl-network/Manifest
@@ -1,5 +1,17 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
+DIST BioPerl-Network-1.006900.tar.gz 2198089 RMD160 777904a9615cc3932c2e4a226e559489169fd6a8 SHA1 c9db1573c3a41b23cd31be4bd32964651d7b12c2 SHA256 5b31ab7d048ee8e7bd6ba933f96b904d7ee06b46ab29c00276eca3513a77c32a
 DIST BioPerl-network-1.6.0.tar.bz2 902029 RMD160 d7152d5917849c40527c56ff07c956fd3c292a1d SHA1 5d5da9f329a97a47939038f6be91f6628c25213c SHA256 1f9e48d7bf1b563fef235eede9524f8446a0374b65c6bf522f3203ed61164cb3
 EBUILD bioperl-network-1.6.0.ebuild 780 RMD160 398e1681875664efb5df0de7d66d111672168c5d SHA1 ce80e7d52ba552d0f4fc6fa3a93bad8563eb8c83 SHA256 86b66bb3c29afa80280903fd09bac7220494b896ae1e53b8dddf1132f7e49ec1
+EBUILD bioperl-network-1.6.9.ebuild 747 RMD160 4ac796bcc6868bd06e4544d85dda9b1d12dd8c6f SHA1 b2b9ca4dcd48d84ffcdce29d3e037d028d231d6d SHA256 426936b83a5228a5f5dc6097ac21b7e8b93c568afc67b87102a8841ee86514ed
 EBUILD bioperl-network-9999-r1.ebuild 775 RMD160 48900a156e04e2593dcd1135e2c985d815a23662 SHA1 80ae3d4101b3bb425764ecbc2c780706b04ddcfb SHA256 07899d61fde10885d46032010699d88c263d1c04e069424a360dbc249f10e87f
-MISC ChangeLog 1137 RMD160 a38e0388334c8f91e109f62263c4f1c4db841772 SHA1 fa9aac6dc815756df4458dc4b95ed097973ba3c6 SHA256 9ac27100ee52816b65f486cc9b6fc195e4ed905c6556f61feb0759d074f6f8f1
+MISC ChangeLog 1284 RMD160 b6559f3a66a14c36c34e16560643e4436bbcf33d SHA1 a454ba774721bf12aefd6b0ead4dff5e6dc89c72 SHA256 75468859a5d6400151314e296bcdfd77adbf23dbe3ed5100ab65551c211f9508
 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v1.4.11 (GNU/Linux)
+
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+qs0AnjJ5Wzc7dvJ6m7wSv3f8iUmU2tL7
+=1F9Y
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/bioperl-run/Manifest b/sci-biology/bioperl-run/Manifest
index e57be428f1c0..82c5589dc22b 100644
--- a/sci-biology/bioperl-run/Manifest
+++ b/sci-biology/bioperl-run/Manifest
@@ -1,10 +1,20 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 AUX bioperl-run-Pise-test-patch.diff 722 RMD160 85c3744bfc14db91971e4df2dfd967c5ad9f0310 SHA1 0498546ae9f12d0db5194c41a360910833870eac SHA256 84c8280f8d3af311b53c8b6edd4e6ffa9acc0824528d96d7f1c2537404d3e30f
+DIST BioPerl-Run-1.006900.tar.gz 14546677 RMD160 9de0a127462d7346d72248499bbe0db3e5d243b7 SHA1 1f514b87be99b93e9f04a4c905188d637f8cc60b SHA256 6eddca8aae38a139caaa0b28505e2ff3e919e8ed39b7539a662b0145f1f08d96
 DIST BioPerl-run-1.6.1.tar.bz2 3968370 RMD160 16654d46d3b5c42c984165ef3e0de93a3b01b015 SHA1 9577201381c34290a34a74aac1f3c35df28f0938 SHA256 16f406d196b6e6d063f4ef518161571ea27909c5b47184d9eddf1eb9da147f53
-DIST bioperl-run-1.4.tar.gz 830774 RMD160 264f9826e4d92c3cac96937b73db9bcc96b9eea8 SHA1 578434800872a41631d1bf2b632f3ef0475a24a1 SHA256 54eea327c8f80061d6c45e56b64d5c51daa20b723390eed1a3377f3a61645d86
 DIST bioperl-run-1.5.1.tar.gz 864369 RMD160 841e33cffda7b787b1700a075bf985c717d7e678 SHA1 35d4ab009f7e653dd18bb636854181d68841b613 SHA256 d9e1f5bdff5541376cab1c8b7e8db9bedbbb7b6f76b965d55dc20122a98f93e8
-EBUILD bioperl-run-1.4.ebuild 1273 RMD160 c96f8714c1a4a4386706f4296572e7e8240e2989 SHA1 142de2a107e8a5020b46973c816ac69e176b2f9f SHA256 17cffd41ea3b90f8f7f4ea71b56b7c04e4f7f2a8a756e1c725d864c4dece2539
 EBUILD bioperl-run-1.5.1.ebuild 1288 RMD160 c3b8b7a28ef8ca2884e77ad5c125fb12a34db0be SHA1 97d54cb97995e08bd02deeafd8dd9c093b461a2b SHA256 d5b066528a330c5a88f1f4c9925185a7efbe7605d27b3ca7dc46e00046943aea
 EBUILD bioperl-run-1.6.1.ebuild 1105 RMD160 f99555fe437f930279cff805bc12e14151e8ae90 SHA1 e51f5523cffeded8aff7b01b6d2fa58529f1256a SHA256 beb92bf8a0385ae0111496401c599947ae80702eb529cfcbd4adc6cd5d7b3fc5
+EBUILD bioperl-run-1.6.9.ebuild 1090 RMD160 69a094ac004df6cb8149114393292f9e687a4f2f SHA1 15176d99be14f07c087adf19d5e7defc85591169 SHA256 e0f4fd2b34db3b192b1ae4720c24850b500e8b34234c62fbcddcbd36e405418b
 EBUILD bioperl-run-9999-r1.ebuild 1083 RMD160 4bd823c2c99499bd2d785a72e155412b001bf27f SHA1 7df9079774ba4e06ed68a087be592df0b5ab7edd SHA256 bb0847a9600cc3a6f6640fcff36b13cd63136196649ea0a8d3ea1c0ecdf1d5e1
-MISC ChangeLog 3793 RMD160 621536da372a13b61396ca0b82caaa05f8127e1c SHA1 147900043ddd225f84cedb5328e431223baff215 SHA256 d5dd021729d8a65b3c856df03f9d3bfeece582cd04174c5019af81bed21e50db
+MISC ChangeLog 3957 RMD160 4c18ff707dbbe3eceb6377a83f2d4d946e23125c SHA1 8a383882056ecab90d180c67e608b70c718fd485 SHA256 b6bbb19fac3b578625019643ac3e04e9889d47dc8382b30dbb28e4089070ecad
 MISC metadata.xml 165 RMD160 b247a16b6552b292d1249ff4e8ea5060ad2c4372 SHA1 a9f91a3a303f4c85430e21eca09913e1c9426366 SHA256 560c375768c8e164d954d61924f110da785b4771012cb830963eaa267a319132
+-----BEGIN PGP SIGNATURE-----
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+-----END PGP SIGNATURE-----
diff --git a/sci-biology/bioperl/Manifest b/sci-biology/bioperl/Manifest
index a35223e53bdd..c2d100c0383c 100644
--- a/sci-biology/bioperl/Manifest
+++ b/sci-biology/bioperl/Manifest
@@ -1,11 +1,21 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 DIST BioPerl-1.6.0.tar.bz2 5640786 RMD160 89261afbbc3754a1dd78934b7b8b653593aa3427 SHA1 7b442ddcb02233c4cb9963a2ea883f755f6904bb SHA256 50a35b1b2552c8f54c83f2bbba7b36264e94443374b86b389208437c8cae3bf6
 DIST BioPerl-1.6.1.tar.bz2 6919711 RMD160 ffde5f89f5d66df0076a6a4acdf6afe79a9fa9b4 SHA1 2343d53b4c42e75f01f2fea2bb570b63db58957b SHA256 6c69a2c22b339b25e0545e2a52eee19c2aadd8ac062df259f64de22531f2ec57
-DIST bioperl-1.4.tar.bz2 4224508 RMD160 657170cc17655f2ab9ed5f6509cac5ae7eedd2c3 SHA1 d0683ff46ef304c04a40296561065d78baa0d787 SHA256 5ba68ce688ac4f079057e03b5bfca60f410d9eb68961d03b62ae75050718687b
+DIST BioPerl-1.6.901.tar.gz 12284856 RMD160 d852438ab4720501b8bd62fa5df4ba302981b410 SHA1 d0650c5e16895c13798003dd3a57bced23e7a9ce SHA256 8c74bde900222ce3926491ee103997c841c8755148c8dcaf0be1abfd61c5ac01
 DIST bioperl-1.5.1.tar.bz2 5538613 RMD160 422bdd0dc17dd246ec1fc3ae6fe020705111892d SHA1 9841a458fd928eb9715f14eb686c7b1af3a379e7 SHA256 696c8bd162bc79fa3c75eeb63bb42f8cbcbb4b72de4dcb3bec7ea7a293506f6c
-EBUILD bioperl-1.4.ebuild 1144 RMD160 7e3108360f973a5199cfe5d89471980fdf475813 SHA1 da03c6457bb8feefd939ec532c0292a31eeb3c57 SHA256 1f9f7fba2480c392b99e860af10910a881e39af8123540bc8e7e6ccf206cf741
 EBUILD bioperl-1.5.1-r1.ebuild 1191 RMD160 1ad0bd41869118ce4482427e7de56829f7fe22ce SHA1 c50b157d571897c896b678d6456f0f7bbed3b60b SHA256 bdee9659d5d464c2339678c1854bac42cf83e900d20380d6c4c3f1ff1606d504
 EBUILD bioperl-1.6.0-r2.ebuild 1813 RMD160 4dc55408dc5a0868769a75a458e02de7fe3c28b5 SHA1 ba78721a68c3d15d8959373ec4a8b9f78945e145 SHA256 a126ac668e16c021ec4e2bc8722da8d4b536f49c10075f829bf44fd41e7b7349
 EBUILD bioperl-1.6.1.ebuild 2024 RMD160 d7a3a427bbf710c86abba4cbcb77943ac591be37 SHA1 d03427a93f4cbf62b68f7d9068ce0b2dfb641bf7 SHA256 52e757a92f8e699cceedc668cc0dbcf3db7f0577d6816af405d25dea6976eb11
+EBUILD bioperl-1.6.9.ebuild 1720 RMD160 4b8eb4ed010c865ddde87393835bbd908aa8868c SHA1 a27f52227c17d6335e89185de3924b8668ce0b18 SHA256 81e47a7f2e37d4af9894e26144dcb65544d6281083c0772203c6d12a73ed10c9
 EBUILD bioperl-9999-r1.ebuild 1908 RMD160 a63f4bc213454002b6599364754616b5d6f5d66c SHA1 d0aca16c4864dbd22720ae7113c7aca72eeb621b SHA256 6a323a7f2572ff46ae6cbdb972b5eb8a98eaed70ae49fe2e3f7daa5a7f819383
-MISC ChangeLog 8426 RMD160 dd54de6d0af91bd2a77817506c2ec5a4e2988363 SHA1 76c0b46177bf28dc1a8e2de052b0e12e854c52ea SHA256 7dd1898b6d5a8a5b969d48465ae8c93cda75ef0f60073402fa9be972ee4b3423
+MISC ChangeLog 8578 RMD160 3a3c9b29d9fe719f1423136f842a61380f67f54f SHA1 155688f4b454ebc48ed04d2d358ec993b5d102ef SHA256 68283606defd8b832b696c8c2057b1101abdcdca8f32d879a89adcfd139b018c
 MISC metadata.xml 357 RMD160 3cd4b6e41d2a1d5ec431a90e0c59ef887f1d5706 SHA1 5a81dea20ab58342851c77d5fd7a2835053ac03b SHA256 be157b353d49731ed3ade95f20205bf367b65ff762d336042e26bca078609afa
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