Removed old version (sources are no longer available). There is no stable PPC version any longer (see bug #179327).

Package-Manager: portage-2.1.2.7

4 files changed, 9 insertions, 84 deletions

diff --git a/sci-biology/t-coffee/ChangeLog b/sci-biology/t-coffee/ChangeLog
index 50f0fcfea9b4..2a89337421a8 100644
--- a/sci-biology/t-coffee/ChangeLog
+++ b/sci-biology/t-coffee/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/t-coffee
 # Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.21 2007/06/27 12:08:45 pylon Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/ChangeLog,v 1.22 2007/07/01 19:24:23 ribosome Exp $
+
+  01 Jul 2007; Olivier Fisette <ribosome@gentoo.org> -t-coffee-3.84.ebuild:
+  Removed old version (sources are no longer available). There is no stable
+  PPC version any longer (see bug #179327).
 
   22 May 2007; Christian Faulhammer <opfer@gentoo.org> t-coffee-4.96.ebuild:
   x86 stable, bug 179327
diff --git a/sci-biology/t-coffee/Manifest b/sci-biology/t-coffee/Manifest
index 1eda0027cf40..be5a659a0b55 100644
--- a/sci-biology/t-coffee/Manifest
+++ b/sci-biology/t-coffee/Manifest
@@ -1,13 +1,5 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
-
-DIST T-COFFEE_distribution_Version_3.84.tar.gz 1625217 RMD160 cda295fd0c2c432c8f802739a3748fcb01f40389 SHA1 b1ddedc7a1d756c6265c20a870e101d75942a1aa SHA256 1c062fe67b1817570fdce8f57999ce637863cc91b4feb91053ef805cc3f48eab
 DIST T-COFFEE_distribution_Version_4.96.tar.gz 2863327 RMD160 d6a7722f1fe3b2a8b186fad49e8bc136d812b610 SHA1 b8ae0be131ae470f5aa596369afa9fc9fbc18701 SHA256 49181acd69a5723fd5b11f579b1efe685b5289bf187985b25b40c514b0af0213
 DIST T-COFFEE_distribution_Version_5.05.tar.gz 2869348 RMD160 edc62c922280ac627089d44997ce859b56950955 SHA1 be137ec323630dc3795deddc71663ece907ef0e8 SHA256 494be7bfca83ee9701fb0fc5aba829fff0592c11173b95f239e39390ca3eeae8
-EBUILD t-coffee-3.84.ebuild 1814 RMD160 2f89d06ef91f1946a0cb0178caeff16924f35dd3 SHA1 89744ef5e82c61bf0f77cad88f09d0806245fd16 SHA256 aad58deacb8762799f5dc443a1b34be4fa06fb54c0b42980ec23cbf5e4736595
-MD5 93fd7a0d063210749ad2817dca89df98 t-coffee-3.84.ebuild 1814
-RMD160 2f89d06ef91f1946a0cb0178caeff16924f35dd3 t-coffee-3.84.ebuild 1814
-SHA256 aad58deacb8762799f5dc443a1b34be4fa06fb54c0b42980ec23cbf5e4736595 t-coffee-3.84.ebuild 1814
 EBUILD t-coffee-4.96.ebuild 2001 RMD160 82b98f6b013f1dc46bc7f1df8b31ba53ea61a374 SHA1 5535de18506a343363f7da77727065046f0d5675 SHA256 4d9cf2cae23d77cf4da88198cf5b6256958994a5ee30c1e25a28f4f3cf5dac03
 MD5 046a131f8d4d6f6d0506238cf6e30575 t-coffee-4.96.ebuild 2001
 RMD160 82b98f6b013f1dc46bc7f1df8b31ba53ea61a374 t-coffee-4.96.ebuild 2001
@@ -16,27 +8,17 @@ EBUILD t-coffee-5.05.ebuild 2005 RMD160 c665bdb7ab535e892890c3f90a061d54b96f98b6
 MD5 de625fecc1501313b1ea88169530896f t-coffee-5.05.ebuild 2005
 RMD160 c665bdb7ab535e892890c3f90a061d54b96f98b6 t-coffee-5.05.ebuild 2005
 SHA256 42b03b515deffcd59d5c39f52d4dd285610a3906d1ff66b289880fca8e2b307e t-coffee-5.05.ebuild 2005
-MISC ChangeLog 2896 RMD160 e291551df8562e97cfa87088d605c3bc592d09bf SHA1 c9cbd1fd408d26e6c9c3e0c6c213fcfbad17c1df SHA256 ad4ea90aa75d08d5b5618c971c963edfa37c2bbb77fecabfbf956d46394c37f1
-MD5 7afa2f0df0b622ccaa94c2d39007fcb8 ChangeLog 2896
-RMD160 e291551df8562e97cfa87088d605c3bc592d09bf ChangeLog 2896
-SHA256 ad4ea90aa75d08d5b5618c971c963edfa37c2bbb77fecabfbf956d46394c37f1 ChangeLog 2896
+MISC ChangeLog 3096 RMD160 4146c259b947dbe941f7b23b7ac8ed542c669f8a SHA1 721d09a25311b4541a241bc2fa58e39d8720bb42 SHA256 e8aa078f3615eeab13dd374dbaad3061526cfcf12db5c117d5fb2a15ea828d20
+MD5 de83d9a04a6daf22c17939b2a4c1f410 ChangeLog 3096
+RMD160 4146c259b947dbe941f7b23b7ac8ed542c669f8a ChangeLog 3096
+SHA256 e8aa078f3615eeab13dd374dbaad3061526cfcf12db5c117d5fb2a15ea828d20 ChangeLog 3096
 MISC metadata.xml 763 RMD160 1163b25c489923e806ccf77dd3b4b5a486da0c28 SHA1 9a6b86bfa165e9b7c0a9b8631990bbfb727fe410 SHA256 8ff6c199eb54e1a49903130ed1aebbe32a0c0b1698aaec2044530c27533270a2
 MD5 d5530b7c0b5defb31d0e1ad80fad02d6 metadata.xml 763
 RMD160 1163b25c489923e806ccf77dd3b4b5a486da0c28 metadata.xml 763
 SHA256 8ff6c199eb54e1a49903130ed1aebbe32a0c0b1698aaec2044530c27533270a2 metadata.xml 763
-MD5 8663d9c02294b9417b3c82f0e9d3a570 files/digest-t-coffee-3.84 307
-RMD160 e234918666e5de1a15e6a0ccb831d7597608a08a files/digest-t-coffee-3.84 307
-SHA256 6717825503db3a5cc4d64a2506dc81d25498dcc2625f37eb64c8df50c25462f9 files/digest-t-coffee-3.84 307
 MD5 f59bcfecf86c8b4729dc646cfe693047 files/digest-t-coffee-4.96 307
 RMD160 1813cba165d62ee51fcecbcc5f04fe587374a5c9 files/digest-t-coffee-4.96 307
 SHA256 2a6ffaf1bef9217315fb872171f49b5810002e900edb2ecc136d9a9f24503d7c files/digest-t-coffee-4.96 307
 MD5 56d859aa293b43ac7c981e8e10b5dbc0 files/digest-t-coffee-5.05 307
 RMD160 b35e86ce914c46e0f661a07dcd54896e1a92027c files/digest-t-coffee-5.05 307
 SHA256 6caf3d7baff8202f79d5201ee4ab95ccba5cac470e67827c28aa8c7e32c5f9b5 files/digest-t-coffee-5.05 307
------BEGIN PGP SIGNATURE-----
-Version: GnuPG v1.4.7 (GNU/Linux)
-
-iD8DBQFGglNN6IPkARlRZfQRAhJcAJ9DkxcbnjtDkbm056O3qi6GvCIk2gCfVfOx
-s4+YbiacONSsUlaIZpAJaLU=
-=NS6W
------END PGP SIGNATURE-----
diff --git a/sci-biology/t-coffee/files/digest-t-coffee-3.84 b/sci-biology/t-coffee/files/digest-t-coffee-3.84
deleted file mode 100644
index bc927afd27fc..000000000000
--- a/sci-biology/t-coffee/files/digest-t-coffee-3.84
+++ /dev/null
@@ -1,3 +0,0 @@
-MD5 f8f74db4132573b0ec8790e64c4cda4c T-COFFEE_distribution_Version_3.84.tar.gz 1625217
-RMD160 cda295fd0c2c432c8f802739a3748fcb01f40389 T-COFFEE_distribution_Version_3.84.tar.gz 1625217
-SHA256 1c062fe67b1817570fdce8f57999ce637863cc91b4feb91053ef805cc3f48eab T-COFFEE_distribution_Version_3.84.tar.gz 1625217
diff --git a/sci-biology/t-coffee/t-coffee-3.84.ebuild b/sci-biology/t-coffee/t-coffee-3.84.ebuild
deleted file mode 100644
index 7a583260fbfa..000000000000
--- a/sci-biology/t-coffee/t-coffee-3.84.ebuild
+++ /dev/null
@@ -1,58 +0,0 @@
-# Copyright 1999-2006 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-3.84.ebuild,v 1.3 2006/07/09 07:18:21 dberkholz Exp $
-
-inherit toolchain-funcs flag-o-matic
-
-DESCRIPTION="A multiple sequence alignment package"
-LICENSE="t-coffee"
-HOMEPAGE="http://igs-server.cnrs-mrs.fr/~cnotred/Projects_home_page/t_coffee_home_page.html"
-SRC_URI="http://igs-server.cnrs-mrs.fr/~cnotred/Packages/T-COFFEE_distribution_Version_${PV}.tar.gz"
-
-SLOT="0"
-IUSE=""
-KEYWORDS="ppc x86"
-
-RESTRICT="nomirror"
-
-DEPEND="sci-biology/clustalw"
-
-TCDIR="${WORKDIR}/T-COFFEE_distribution_Version_${PV}"
-S="${TCDIR}/t_coffee_source"
-
-src_unpack() {
-	unpack ${A}
-	cd "${S}"
-	sed -e "s/CC	= cc/CC	= $(tc-getCC) ${CFLAGS}/" -i makefile || die \
-		"Failed to patch makefile."
-}
-
-die_compile() {
-	echo
-	eerror "If you experience an internal compiler error (consult the above"
-	eerror "messages), try compiling t-coffee using very modest compiler flags."
-	eerror "See bug #114745 on the Gentoo Bugzilla for more details."
-	die "Compilation failed"
-}
-
-src_compile() {
-	[[ $(gcc-version) == "3.4" ]] && append-flags -fno-unit-at-a-time
-	make all || die_compile
-}
-
-src_install() {
-	cd "${TCDIR}"/bin
-	dobin t_coffee || die "Failed to install program."
-	insinto /usr/share/${PN}/lib/html
-	doins ${TCDIR}/html/* || die "Failed to install HTML documentation,"
-
-	dodoc ${TCDIR}/doc/README4T-COFFEE || die \
-		"Failed to install basic documentation."
-	insinto /usr/share/doc/${PF}
-	doins ${TCDIR}/doc/t_coffee{_doc.{doc,pdf},.pdf} || die \
-		"Failed to install manuals and articles."
-	doins ${TCDIR}/doc/*.txt || die "Failed to install documentation."
-
-	insinto /usr/share/${PN}/example
-	doins ${TCDIR}/example/* || die "Failed to install example files."
-}