Removed obsolete/buggy versions

Package-Manager: portage-2.0.53

9 files changed, 8 insertions, 134 deletions

diff --git a/sci-biology/ariadne/Manifest b/sci-biology/ariadne/Manifest
index efe4769d1b29..54823de997cc 100644
--- a/sci-biology/ariadne/Manifest
+++ b/sci-biology/ariadne/Manifest
@@ -1,4 +1,4 @@
-MD5 f942d6baa610dd7a49796375e6163267 ChangeLog 871
-MD5 e877882250d95f4654420255029ed7ae ariadne-1.3-r1.ebuild 901
+MD5 1dc98a1d921066eb1687963e74736512 ChangeLog 967
+MD5 66fafc5a8d34c2dacc0abbd71677c42d ariadne-1.3-r1.ebuild 924
 MD5 2c1e987db0cdcd91873d0e7a4476bbad files/digest-ariadne-1.3-r1 61
 MD5 feb133611c8c1d9ca6db169db059426a metadata.xml 947
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index f7c2a8b74e07..91ecb7231073 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/rebase
 # Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.52 2006/01/21 17:19:43 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.53 2006/01/21 17:22:09 ribosome Exp $
+
+  21 Jan 2006; Olivier Fisette <ribosome@gentoo.org> -rebase-509.ebuild,
+  -rebase-511.ebuild, -rebase-601.ebuild:
+  Removed obsolete/buggy versions.
 
 *rebase-601-r1 (21 Jan 2006)
 
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index 7d3cc0c8b85d..789cad460a84 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,12 +1,6 @@
-MD5 e8fe8c7418ab4adfc87e79e086115ae8 ChangeLog 7516
-MD5 8b72021e3a53e0c9ab7acaf2d016637e files/digest-rebase-509 63
-MD5 de0923d154ca7a32f45ee6bb9d3a40c4 files/digest-rebase-511 63
+MD5 1069df2e99caf4409ab6a971b61b3656 ChangeLog 7667
 MD5 0327e485fe0040317dd1016583b0d76d files/digest-rebase-512 63
-MD5 9b37c587b84cf914d6f9a9b616c493db files/digest-rebase-601 63
 MD5 9b37c587b84cf914d6f9a9b616c493db files/digest-rebase-601-r1 63
 MD5 550f8d428f3e75690b43d32df6aa60cd metadata.xml 900
-MD5 b4f7769279c4301bacb9c4b78f136d08 rebase-509.ebuild 1097
-MD5 fe94217aa8122be5dc5855d73772d8b0 rebase-511.ebuild 1237
 MD5 292928f0068bac8ab37a29c223af581e rebase-512.ebuild 1238
 MD5 1f37d617fb4f49bd6f9cc7e8d1942573 rebase-601-r1.ebuild 1363
-MD5 ac62c4563f22a49719f3623d9e163ce1 rebase-601.ebuild 1244
diff --git a/sci-biology/rebase/files/digest-rebase-509 b/sci-biology/rebase/files/digest-rebase-509
deleted file mode 100644
index 744a2563e1f0..000000000000
--- a/sci-biology/rebase/files/digest-rebase-509
+++ /dev/null
@@ -1 +0,0 @@
-MD5 4ae7f46adea8c9ba0cf79c67f10e60b9 rebase-509.tar.bz2 180114
diff --git a/sci-biology/rebase/files/digest-rebase-511 b/sci-biology/rebase/files/digest-rebase-511
deleted file mode 100644
index d8851851fd15..000000000000
--- a/sci-biology/rebase/files/digest-rebase-511
+++ /dev/null
@@ -1 +0,0 @@
-MD5 6b53178dba38317b0173943213e745b2 rebase-511.tar.bz2 181327
diff --git a/sci-biology/rebase/files/digest-rebase-601 b/sci-biology/rebase/files/digest-rebase-601
deleted file mode 100644
index 514623f4bd95..000000000000
--- a/sci-biology/rebase/files/digest-rebase-601
+++ /dev/null
@@ -1 +0,0 @@
-MD5 473a812ec6119fb8b02ac3e0bfec6884 rebase-601.tar.bz2 181829
diff --git a/sci-biology/rebase/rebase-509.ebuild b/sci-biology/rebase/rebase-509.ebuild
deleted file mode 100644
index 223a65c7f8a0..000000000000
--- a/sci-biology/rebase/rebase-509.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-509.ebuild,v 1.6 2005/11/19 18:22:16 blubb Exp $
-
-DESCRIPTION="A restriction enzyme database"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-LICENSE="public-domain"
-
-SLOT="0"
-KEYWORDS="amd64 ppc ppc-macos ppc64 x86"
-IUSE="emboss minimal"
-# Minimal build keeps only the indexed files (if applicable) and the documentation.
-# The non-indexed database is not installed.
-
-DEPEND="emboss? ( sci-biology/emboss )"
-
-src_compile() {
-	if use emboss; then
-		echo
-		einfo "Indexing ${PN} for usage with EMBOSS."
-		mkdir REBASE
-		EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \
-			-protofile proto.${PV} || die "Indexing ${PN} failed."
-		echo
-	fi
-}
-
-src_install() {
-	if ! use minimal; then
-		insinto /usr/share/${PN}
-		doins withrefm.${PV} proto.${PV}
-	fi
-	newdoc REBASE.DOC README
-	if use emboss; then
-		insinto /usr/share/EMBOSS/data/REBASE
-		doins REBASE/{embossre.enz,embossre.ref,embossre.sup}
-	fi
-}
diff --git a/sci-biology/rebase/rebase-511.ebuild b/sci-biology/rebase/rebase-511.ebuild
deleted file mode 100644
index e6c10fff248f..000000000000
--- a/sci-biology/rebase/rebase-511.ebuild
+++ /dev/null
@@ -1,41 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-511.ebuild,v 1.5 2005/12/24 00:01:29 blubb Exp $
-
-DESCRIPTION="A restriction enzyme database"
-LICENSE="public-domain"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-
-SLOT="0"
-# Minimal build keeps only the indexed files (if applicable) and the
-# documentation. The non-indexed database is not installed.
-IUSE="emboss minimal"
-KEYWORDS="amd64 ppc ~ppc-macos ppc64 x86"
-
-DEPEND="emboss? ( sci-biology/emboss )"
-
-src_compile() {
-	if use emboss; then
-		echo
-		einfo "Indexing ${PN} for usage with EMBOSS."
-		mkdir REBASE
-		EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \
-			-protofile proto.${PV} || die "Indexing ${PN} failed."
-		echo
-	fi
-}
-
-src_install() {
-	if ! use minimal; then
-		insinto /usr/share/${PN}
-		doins withrefm.${PV} proto.${PV} || die \
-			"Failed to install raw database."
-	fi
-	newdoc REBASE.DOC README || die "Failed to install documentation."
-	if use emboss; then
-		insinto /usr/share/EMBOSS/data/REBASE
-		doins REBASE/{embossre.enz,embossre.ref,embossre.sup} || die \
-			"Failed to install EMBOSS data files."
-	fi
-}
diff --git a/sci-biology/rebase/rebase-601.ebuild b/sci-biology/rebase/rebase-601.ebuild
deleted file mode 100644
index f1a9ebf3bdbb..000000000000
--- a/sci-biology/rebase/rebase-601.ebuild
+++ /dev/null
@@ -1,41 +0,0 @@
-# Copyright 1999-2006 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-601.ebuild,v 1.1 2006/01/07 04:05:10 ribosome Exp $
-
-DESCRIPTION="A restriction enzyme database"
-LICENSE="public-domain"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-
-SLOT="0"
-# Minimal build keeps only the indexed files (if applicable) and the
-# documentation. The non-indexed database is not installed.
-IUSE="emboss minimal"
-KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64"
-
-DEPEND="emboss? ( sci-biology/emboss )"
-
-src_compile() {
-	if use emboss; then
-		echo
-		einfo "Indexing ${PN} for usage with EMBOSS."
-		mkdir REBASE
-		EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \
-			-protofile proto.${PV} || die "Indexing ${PN} failed."
-		echo
-	fi
-}
-
-src_install() {
-	if ! use minimal; then
-		insinto /usr/share/${PN}
-		doins withrefm.${PV} proto.${PV} || die \
-			"Failed to install raw database."
-	fi
-	newdoc REBASE.DOC README || die "Failed to install documentation."
-	if use emboss; then
-		insinto /usr/share/EMBOSS/data/REBASE
-		doins REBASE/{embossre.enz,embossre.ref,embossre.sup} || die \
-			"Failed to install EMBOSS data files."
-	fi
-}