Removing obsolete embassy packages

Package-Manager: portage-2.0.51.22-r2

29 files changed, 45 insertions, 230 deletions

diff --git a/sci-biology/embassy-domainatrix/ChangeLog b/sci-biology/embassy-domainatrix/ChangeLog
index 3de69ba3c813..a3e4d1595c29 100644
--- a/sci-biology/embassy-domainatrix/ChangeLog
+++ b/sci-biology/embassy-domainatrix/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/embassy-domainatrix
 # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/ChangeLog,v 1.13 2005/10/03 23:54:12 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/ChangeLog,v 1.14 2005/10/04 00:06:30 ribosome Exp $
+
+  03 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
+  -files/embassy-domainatrix-1.0.0-r1.patch,
+  -embassy-domainatrix-1.0.0-r1.ebuild:
+  Removed obsolete version.
 
   03 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
   embassy-domainatrix-0.1.0.ebuild:
diff --git a/sci-biology/embassy-domainatrix/embassy-domainatrix-1.0.0-r1.ebuild b/sci-biology/embassy-domainatrix/embassy-domainatrix-1.0.0-r1.ebuild
deleted file mode 100644
index 4d00681c2000..000000000000
--- a/sci-biology/embassy-domainatrix/embassy-domainatrix-1.0.0-r1.ebuild
+++ /dev/null
@@ -1,11 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/embassy-domainatrix-1.0.0-r1.ebuild,v 1.5 2005/08/07 21:41:10 ribosome Exp $
-
-EBOV="2.10.0"
-
-inherit embassy
-
-DESCRIPTION="Protein domain analysis add-on package for EMBOSS"
-
-KEYWORDS="ppc ppc-macos x86"
diff --git a/sci-biology/embassy-domainatrix/files/digest-embassy-domainatrix-1.0.0-r1 b/sci-biology/embassy-domainatrix/files/digest-embassy-domainatrix-1.0.0-r1
deleted file mode 100644
index d48048232a0a..000000000000
--- a/sci-biology/embassy-domainatrix/files/digest-embassy-domainatrix-1.0.0-r1
+++ /dev/null
@@ -1,2 +0,0 @@
-MD5 4a48388ced7021a8ffece5166c40a364 EMBOSS-2.10.0.tar.gz 16262124
-MD5 78e1145851073a277e568ee3a691d999 DOMAINATRIX-1.0.0.tar.gz 551090
diff --git a/sci-biology/embassy-domainatrix/files/embassy-domainatrix-1.0.0-r1.patch b/sci-biology/embassy-domainatrix/files/embassy-domainatrix-1.0.0-r1.patch
deleted file mode 100644
index 21e54040e999..000000000000
--- a/sci-biology/embassy-domainatrix/files/embassy-domainatrix-1.0.0-r1.patch
+++ /dev/null
@@ -1,50 +0,0 @@
---- src/pdbparse.c.old	2005-03-25 12:12:50.000000000 -0500
-+++ src/pdbparse.c	2005-03-25 10:55:57.000000000 -0500
-@@ -240,7 +240,7 @@
- 	
- 	/* Parse pdb file and write pdb structure */
- 	if(!(pdb=ajPdbReadRawNew(pdb_inf, pdbid, min_chain_size, max_mismatch, 
--				 camask, camask1, atommask, logf)))
-+				 0, camask, camask1, atommask, logf)))
- 	{	
- 	    ajFmtPrintS(&msg, "Clean coordinate file not generated for %S", temp);
- 	    ajWarn(ajStrStr(msg));
---- src/scopnr.c.old	2005-03-25 12:17:40.000000000 -0500
-+++ src/scopnr.c	2005-03-25 11:11:28.000000000 -0500
-@@ -324,10 +324,10 @@
- 		    /* Remove redundancy from list_seqs*/
- 		    if(moden==1)
- 			ret=embDmxSeqNR(list_seqs, &keep, &nsetnr, matrix, gapopen, 
--					   gapextend,thresh);
-+					   gapextend,thresh, FALSE);
- 		    else
- 			ret=embDmxSeqNRRange(list_seqs, &keep, &nsetnr, matrix, gapopen, 
--					   gapextend,threshlow, threshup);		    
-+					   gapextend,threshlow, threshup, FALSE);		    
- 		    if(!ret)
- 		    {
- 			ajStrDel(&last_fam);
-@@ -464,10 +464,10 @@
- 	/* Remove redundancy from list_seqs*/
- 	if(moden==1)
- 	    embDmxSeqNR(list_seqs, &keep, &nsetnr, matrix, gapopen, 
--			   gapextend,thresh);		
-+			   gapextend,thresh, FALSE);		
- 	else
- 	    embDmxSeqNRRange(list_seqs, &keep, &nsetnr, matrix, gapopen, 
--				gapextend,threshlow, threshup);		
-+				gapextend,threshlow, threshup, FALSE);		
- 
- 	/* Write file with SCOP entries that are retained*/
- 	for(iter=ajListIterRead(list_scop), x=0;
---- src/seqnr.c.old	2005-03-25 12:19:34.000000000 -0500
-+++ src/seqnr.c	2005-03-25 11:13:42.000000000 -0500
-@@ -829,7 +829,7 @@
- 
-         /* Remove the redundancy from the sequence set */
- /*JISON*/        keep        = ajIntNew();
--        embDmxSeqNR(famin_seqs, &keep, &nsetnr, matrix, gapopen, gapextend, thresh);
-+        embDmxSeqNR(famin_seqs, &keep, &nsetnr, matrix, gapopen, gapextend, thresh, FALSE);
- 
-         /* clean up famin_seqs */
-         iter=ajListIterRead(famin_seqs);
diff --git a/sci-biology/embassy-emnu/ChangeLog b/sci-biology/embassy-emnu/ChangeLog
index 5a7db9dcbc13..b9dd26820887 100644
--- a/sci-biology/embassy-emnu/ChangeLog
+++ b/sci-biology/embassy-emnu/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-emnu
 # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/ChangeLog,v 1.13 2005/10/03 23:54:12 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/ChangeLog,v 1.14 2005/10/04 00:06:30 ribosome Exp $
+
+  03 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
+  -files/embassy-emnu-1.05-r1.patch, -embassy-emnu-1.05-r1.ebuild:
+  Removed obsolete version.
 
   03 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
   embassy-emnu-1.05-r2.ebuild:
diff --git a/sci-biology/embassy-emnu/embassy-emnu-1.05-r1.ebuild b/sci-biology/embassy-emnu/embassy-emnu-1.05-r1.ebuild
deleted file mode 100644
index fdabf6d25b1b..000000000000
--- a/sci-biology/embassy-emnu/embassy-emnu-1.05-r1.ebuild
+++ /dev/null
@@ -1,17 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/embassy-emnu-1.05-r1.ebuild,v 1.5 2005/08/07 21:41:10 ribosome Exp $
-
-EBOV="2.10.0"
-
-inherit embassy
-
-DESCRIPTION="EMBOSS Menu is Not UNIX - Simple menu of EMBOSS applications"
-
-KEYWORDS="ppc ppc-macos x86"
-
-RDEPEND="sys-libs/ncurses
-	${RDEPEND}"
-
-DEPEND="sys-libs/ncurses
-	${DEPEND}"
diff --git a/sci-biology/embassy-emnu/files/digest-embassy-emnu-1.05-r1 b/sci-biology/embassy-emnu/files/digest-embassy-emnu-1.05-r1
deleted file mode 100644
index b305f3e80ea7..000000000000
--- a/sci-biology/embassy-emnu/files/digest-embassy-emnu-1.05-r1
+++ /dev/null
@@ -1,2 +0,0 @@
-MD5 4a48388ced7021a8ffece5166c40a364 EMBOSS-2.10.0.tar.gz 16262124
-MD5 81435e71026a8ae6c361831a38ec1662 EMNU-1.05.tar.gz 340031
diff --git a/sci-biology/embassy-emnu/files/embassy-emnu-1.05-r1.patch b/sci-biology/embassy-emnu/files/embassy-emnu-1.05-r1.patch
deleted file mode 100644
index 4b216ab7e215..000000000000
--- a/sci-biology/embassy-emnu/files/embassy-emnu-1.05-r1.patch
+++ /dev/null
@@ -1,11 +0,0 @@
---- source/emnu.c.old	2005-03-25 12:28:08.000000000 -0500
-+++ source/emnu.c	2005-03-25 11:33:23.000000000 -0500
-@@ -3080,7 +3080,7 @@
- **  don't want to ignore applications that don't work in GUIs 
- **  (emnu is not a GUI!)
- */
--    embGrpGetProgGroups (glist, alpha, env, ajTrue, ajTrue, explode, 
-+    embGrpGetProgGroups (glist, alpha, env, ajTrue, ajTrue, NULL, explode, 
-     	ajFalse, ajFalse);
- 
- 
diff --git a/sci-biology/embassy-esim4/ChangeLog b/sci-biology/embassy-esim4/ChangeLog
index 76af2f39ddbb..48d6347147c8 100644
--- a/sci-biology/embassy-esim4/ChangeLog
+++ b/sci-biology/embassy-esim4/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-esim4
 # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/ChangeLog,v 1.13 2005/10/03 23:54:12 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/ChangeLog,v 1.14 2005/10/04 00:06:30 ribosome Exp $
+
+  04 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
+  -embassy-esim4-1.0.0-r1.ebuild:
+  Removed obsolete version.
 
   03 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
   embassy-esim4-1.0.0-r2.ebuild:
diff --git a/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r1.ebuild b/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r1.ebuild
deleted file mode 100644
index 7d5294a78b73..000000000000
--- a/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r1.ebuild
+++ /dev/null
@@ -1,11 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r1.ebuild,v 1.5 2005/08/07 21:41:10 ribosome Exp $
-
-EBOV="2.10.0"
-
-inherit embassy
-
-DESCRIPTION="EMBOSS integrated version of sim4 - Alignment of cDNA and genomic DNA"
-
-KEYWORDS="ppc ppc-macos x86"
diff --git a/sci-biology/embassy-esim4/files/digest-embassy-esim4-1.0.0-r1 b/sci-biology/embassy-esim4/files/digest-embassy-esim4-1.0.0-r1
deleted file mode 100644
index bc516052d9d7..000000000000
--- a/sci-biology/embassy-esim4/files/digest-embassy-esim4-1.0.0-r1
+++ /dev/null
@@ -1,2 +0,0 @@
-MD5 4a48388ced7021a8ffece5166c40a364 EMBOSS-2.10.0.tar.gz 16262124
-MD5 d00209b958a45a1ba7cb617950e3fa48 ESIM4-1.0.0.tar.gz 375473
diff --git a/sci-biology/embassy-hmmer/ChangeLog b/sci-biology/embassy-hmmer/ChangeLog
index c26ae5d6d458..159a2e08e447 100644
--- a/sci-biology/embassy-hmmer/ChangeLog
+++ b/sci-biology/embassy-hmmer/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-hmmer
 # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/ChangeLog,v 1.14 2005/10/03 23:54:12 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/ChangeLog,v 1.15 2005/10/04 00:06:31 ribosome Exp $
+
+  04 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
+  -embassy-hmmer-2.1.1-r1.ebuild:
+  Removed obsolete version.
 
   03 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
   embassy-hmmer-2.1.1-r2.ebuild:
diff --git a/sci-biology/embassy-hmmer/embassy-hmmer-2.1.1-r1.ebuild b/sci-biology/embassy-hmmer/embassy-hmmer-2.1.1-r1.ebuild
deleted file mode 100644
index beda019c4f86..000000000000
--- a/sci-biology/embassy-hmmer/embassy-hmmer-2.1.1-r1.ebuild
+++ /dev/null
@@ -1,17 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/embassy-hmmer-2.1.1-r1.ebuild,v 1.6 2005/08/07 21:41:10 ribosome Exp $
-
-EBOV="2.10.0"
-
-inherit embassy
-
-DESCRIPTION="EMBOSS integrated version of HMMER - Biological sequence analysis with profile HMMs"
-
-KEYWORDS="ppc ppc-macos x86"
-
-src_install() {
-	embassy_src_install
-	insinto /usr/include/emboss/hmmer
-	doins src/*.h
-}
diff --git a/sci-biology/embassy-hmmer/files/digest-embassy-hmmer-2.1.1-r1 b/sci-biology/embassy-hmmer/files/digest-embassy-hmmer-2.1.1-r1
deleted file mode 100644
index f42c406d302e..000000000000
--- a/sci-biology/embassy-hmmer/files/digest-embassy-hmmer-2.1.1-r1
+++ /dev/null
@@ -1,2 +0,0 @@
-MD5 4a48388ced7021a8ffece5166c40a364 EMBOSS-2.10.0.tar.gz 16262124
-MD5 e060f31a25074dd64a7885a85cbc15da HMMER-2.1.1.tar.gz 552322
diff --git a/sci-biology/embassy-meme/ChangeLog b/sci-biology/embassy-meme/ChangeLog
index ed7206aca5df..ebd1e91df26f 100644
--- a/sci-biology/embassy-meme/ChangeLog
+++ b/sci-biology/embassy-meme/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-meme
 # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-meme/ChangeLog,v 1.14 2005/10/03 23:54:12 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-meme/ChangeLog,v 1.15 2005/10/04 00:06:31 ribosome Exp $
+
+  04 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
+  -embassy-meme-2.3.1-r1.ebuild:
+  Removed obsolete version.
 
   03 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
   embassy-meme-2.3.1-r2.ebuild:
diff --git a/sci-biology/embassy-meme/embassy-meme-2.3.1-r1.ebuild b/sci-biology/embassy-meme/embassy-meme-2.3.1-r1.ebuild
deleted file mode 100644
index b501d36f36e3..000000000000
--- a/sci-biology/embassy-meme/embassy-meme-2.3.1-r1.ebuild
+++ /dev/null
@@ -1,17 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-meme/embassy-meme-2.3.1-r1.ebuild,v 1.6 2005/08/07 21:41:10 ribosome Exp $
-
-EBOV="2.10.0"
-
-inherit embassy
-
-DESCRIPTION="EMBOSS integrated version of MEME - Multiple Em for Motif Elicitation"
-
-KEYWORDS="ppc ppc-macos x86"
-
-src_install() {
-	embassy_src_install
-	insinto /usr/include/emboss/meme
-	doins src/INCLUDE/*.h
-}
diff --git a/sci-biology/embassy-meme/files/digest-embassy-meme-2.3.1-r1 b/sci-biology/embassy-meme/files/digest-embassy-meme-2.3.1-r1
deleted file mode 100644
index 89d1ad4e02fa..000000000000
--- a/sci-biology/embassy-meme/files/digest-embassy-meme-2.3.1-r1
+++ /dev/null
@@ -1,2 +0,0 @@
-MD5 4a48388ced7021a8ffece5166c40a364 EMBOSS-2.10.0.tar.gz 16262124
-MD5 f81f0a6fffcd202e577b25085037bb5e MEME-2.3.1.tar.gz 415122
diff --git a/sci-biology/embassy-mse/ChangeLog b/sci-biology/embassy-mse/ChangeLog
index 04ea80324e79..62702a724412 100644
--- a/sci-biology/embassy-mse/ChangeLog
+++ b/sci-biology/embassy-mse/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-mse
 # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/ChangeLog,v 1.14 2005/10/03 23:54:12 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/ChangeLog,v 1.15 2005/10/04 00:06:31 ribosome Exp $
+
+  04 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
+  -embassy-mse-1.0.0-r1.ebuild:
+  Removed obsolete version.
 
   03 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
   embassy-mse-1.0.0-r2.ebuild:
diff --git a/sci-biology/embassy-mse/embassy-mse-1.0.0-r1.ebuild b/sci-biology/embassy-mse/embassy-mse-1.0.0-r1.ebuild
deleted file mode 100644
index 4d73e40ffa9d..000000000000
--- a/sci-biology/embassy-mse/embassy-mse-1.0.0-r1.ebuild
+++ /dev/null
@@ -1,17 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/embassy-mse-1.0.0-r1.ebuild,v 1.6 2005/08/07 21:41:10 ribosome Exp $
-
-EBOV="2.10.0"
-
-inherit embassy
-
-DESCRIPTION="EMBOSS integrated version of MSE - Multiple Sequence Editor"
-
-KEYWORDS="ppc ppc-macos x86"
-
-src_install() {
-	embassy_src_install
-	insinto /usr/include/emboss/mse
-	doins h/*.h
-}
diff --git a/sci-biology/embassy-mse/files/digest-embassy-mse-1.0.0-r1 b/sci-biology/embassy-mse/files/digest-embassy-mse-1.0.0-r1
deleted file mode 100644
index 77b29ddadce1..000000000000
--- a/sci-biology/embassy-mse/files/digest-embassy-mse-1.0.0-r1
+++ /dev/null
@@ -1,2 +0,0 @@
-MD5 4a48388ced7021a8ffece5166c40a364 EMBOSS-2.10.0.tar.gz 16262124
-MD5 c599e848a44d6353e42fb59578417e41 MSE-1.0.0.tar.gz 405440
diff --git a/sci-biology/embassy-phylip/ChangeLog b/sci-biology/embassy-phylip/ChangeLog
index e097c99a5939..716557edef3c 100644
--- a/sci-biology/embassy-phylip/ChangeLog
+++ b/sci-biology/embassy-phylip/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-phylip
 # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylip/ChangeLog,v 1.14 2005/10/03 23:54:12 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylip/ChangeLog,v 1.15 2005/10/04 00:06:31 ribosome Exp $
+
+  04 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
+  -embassy-phylip-3.57c-r1.ebuild:
+  Removed obsolete version.
 
   03 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
   embassy-phylip-3.6b.ebuild:
diff --git a/sci-biology/embassy-phylip/embassy-phylip-3.57c-r1.ebuild b/sci-biology/embassy-phylip/embassy-phylip-3.57c-r1.ebuild
deleted file mode 100644
index ac51130bd2e8..000000000000
--- a/sci-biology/embassy-phylip/embassy-phylip-3.57c-r1.ebuild
+++ /dev/null
@@ -1,12 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylip/embassy-phylip-3.57c-r1.ebuild,v 1.5 2005/08/07 21:41:10 ribosome Exp $
-
-EBOV="2.10.0"
-
-inherit embassy
-
-DESCRIPTION="EMBOSS integrated version of the PHYLogeny Inference Package"
-LICENSE="freedist"
-
-KEYWORDS="ppc ppc-macos x86"
diff --git a/sci-biology/embassy-phylip/files/digest-embassy-phylip-3.57c-r1 b/sci-biology/embassy-phylip/files/digest-embassy-phylip-3.57c-r1
deleted file mode 100644
index 20a118948706..000000000000
--- a/sci-biology/embassy-phylip/files/digest-embassy-phylip-3.57c-r1
+++ /dev/null
@@ -1,2 +0,0 @@
-MD5 4a48388ced7021a8ffece5166c40a364 EMBOSS-2.10.0.tar.gz 16262124
-MD5 6a5afaed10f177758b84f2c3c51aee78 PHYLIP-3.57c.tar.gz 843060
diff --git a/sci-biology/embassy-topo/ChangeLog b/sci-biology/embassy-topo/ChangeLog
index a0ce9d038218..3808a4e53afc 100644
--- a/sci-biology/embassy-topo/ChangeLog
+++ b/sci-biology/embassy-topo/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-topo
 # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/ChangeLog,v 1.13 2005/10/03 23:54:12 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/ChangeLog,v 1.14 2005/10/04 00:06:31 ribosome Exp $
+
+  04 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
+  -embassy-topo-1.0.0-r1.ebuild:
+  Removed obsolete version.
 
   03 Oct 2005; Olivier Fisette <ribosome@gentoo.org>
   embassy-topo-1.0.0-r2.ebuild:
diff --git a/sci-biology/embassy-topo/embassy-topo-1.0.0-r1.ebuild b/sci-biology/embassy-topo/embassy-topo-1.0.0-r1.ebuild
deleted file mode 100644
index 8c4f67b9c96c..000000000000
--- a/sci-biology/embassy-topo/embassy-topo-1.0.0-r1.ebuild
+++ /dev/null
@@ -1,11 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/embassy-topo-1.0.0-r1.ebuild,v 1.5 2005/08/07 21:41:11 ribosome Exp $
-
-EBOV="2.10.0"
-
-inherit embassy
-
-DESCRIPTION="EMBOSS integrated version of TOPO - Transmembrane protein display"
-
-KEYWORDS="ppc ppc-macos x86"
diff --git a/sci-biology/embassy-topo/files/digest-embassy-topo-1.0.0-r1 b/sci-biology/embassy-topo/files/digest-embassy-topo-1.0.0-r1
deleted file mode 100644
index 33e1069c2b53..000000000000
--- a/sci-biology/embassy-topo/files/digest-embassy-topo-1.0.0-r1
+++ /dev/null
@@ -1,2 +0,0 @@
-MD5 4a48388ced7021a8ffece5166c40a364 EMBOSS-2.10.0.tar.gz 16262124
-MD5 51885b65b79b87631f3536362e453ed8 TOPO-1.0.0.tar.gz 342704
diff --git a/sci-biology/embassy/ChangeLog b/sci-biology/embassy/ChangeLog
index 25cdd459ea2b..7f0070eeecec 100644
--- a/sci-biology/embassy/ChangeLog
+++ b/sci-biology/embassy/ChangeLog
@@ -1,6 +1,9 @@
 # ChangeLog for sci-biology/embassy
 # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy/ChangeLog,v 1.17 2005/10/03 23:54:12 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy/ChangeLog,v 1.18 2005/10/04 00:06:30 ribosome Exp $
+
+  03 Oct 2005; Olivier Fisette <ribosome@gentoo.org> -embassy-2.10.0.ebuild:
+  Removed obsolete version.
 
   03 Oct 2005; Olivier Fisette <ribosome@gentoo.org> embassy-3.0.0.ebuild:
   Stable on ppc-macos (with j4rg0n's permission, bug #102420).
diff --git a/sci-biology/embassy/embassy-2.10.0.ebuild b/sci-biology/embassy/embassy-2.10.0.ebuild
deleted file mode 100644
index 5eb4876fbaf1..000000000000
--- a/sci-biology/embassy/embassy-2.10.0.ebuild
+++ /dev/null
@@ -1,31 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy/embassy-2.10.0.ebuild,v 1.7 2005/07/27 05:10:54 j4rg0n Exp $
-
-DESCRIPTION="A meta-package for installing all EMBASSY packages (EMBOSS add-ons)"
-HOMEPAGE="http://www.emboss.org/"
-SRC_URI=""
-LICENSE="GPL-2 freedist"
-
-SLOT="0"
-KEYWORDS="ppc ppc-macos x86"
-IUSE=""
-
-# IUSE="no-conflict"
-# In the future, I plan to integrate packages such as the standalone meme, which
-# would conflict with the corresponding embassy-meme package. Conflicting
-# EMBASSY packages will be marked as blockers of the standalone version (and vice
-# versa), and the no-conflict USE flag will make it easy to install all EMBASSY
-# packages except the conflictual ones.
-
-RDEPEND="!=sci-biology/emboss-2.9*
-	=sci-biology/emboss-2.10*
-	=sci-biology/embassy-construct-1.0.0
-	=sci-biology/embassy-domainatrix-1.0.0-r1
-	=sci-biology/embassy-emnu-1.05-r1
-	=sci-biology/embassy-esim4-1.0.0-r1
-	=sci-biology/embassy-hmmer-2.1.1-r1
-	=sci-biology/embassy-meme-2.3.1-r1
-	=sci-biology/embassy-mse-1.0.0-r1
-	=sci-biology/embassy-phylip-3.57c-r1
-	=sci-biology/embassy-topo-1.0.0-r1"
diff --git a/sci-biology/embassy/files/digest-embassy-2.10.0 b/sci-biology/embassy/files/digest-embassy-2.10.0
deleted file mode 100644
index e69de29bb2d1..000000000000
--- a/sci-biology/embassy/files/digest-embassy-2.10.0
+++ /dev/null