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authorJustin Lecher <jlec@gentoo.org>2014-01-14 15:39:15 +0000
committerJustin Lecher <jlec@gentoo.org>2014-01-14 15:39:15 +0000
commite5f54a932a15991c8b43475cd516f1dd8a7238da (patch)
tree6c550b9afae109675e6e0c53ad931cd2dad8d8ad /sci-biology
parentStable for HPPA (bug #497460). (diff)
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sci-biology/seaview: Drop old
Package-Manager: portage-2.2.8/cvs/Linux x86_64 Manifest-Sign-Key: 0xB9D4F231BD1558AB!
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/seaview/ChangeLog5
-rw-r--r--sci-biology/seaview/Manifest32
-rw-r--r--sci-biology/seaview/seaview-4.3.3.ebuild76
3 files changed, 19 insertions, 94 deletions
diff --git a/sci-biology/seaview/ChangeLog b/sci-biology/seaview/ChangeLog
index 25ee187a2007..37e191fbd6c8 100644
--- a/sci-biology/seaview/ChangeLog
+++ b/sci-biology/seaview/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/seaview
# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.53 2014/01/14 15:33:19 ago Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.54 2014/01/14 15:39:14 jlec Exp $
+
+ 14 Jan 2014; Justin Lecher <jlec@gentoo.org> -seaview-4.3.3.ebuild:
+ Drop old
14 Jan 2014; Agostino Sarubbo <ago@gentoo.org> seaview-4.3.5.ebuild:
Stable for ppc, wrt bug #497216
diff --git a/sci-biology/seaview/Manifest b/sci-biology/seaview/Manifest
index 8f626964f9bf..ecc7c6bc4492 100644
--- a/sci-biology/seaview/Manifest
+++ b/sci-biology/seaview/Manifest
@@ -1,26 +1,24 @@
-----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA256
+Hash: SHA512
-DIST seaview_4.3.3.tar.gz 313375 SHA256 632286397b4959ed8e379d6a6c57715a01634a81596ed681bcd87e14e10684b4 SHA512 cc3eb433c807b3482a4e883ffc96e00b8e04b6208561d3e7c7409da25e2171e5db7a0caa252070da904bd672d68f151967133ae0801fe2c6ffdee0d9af7ec8c3 WHIRLPOOL 0310a5e707c7314e3038a7e9467fa854868b691e7f4a82a75808ddf9197c8a98030414be67649c8b6def31a350899faa615c5d38a8f69966dc60080e51964915
DIST seaview_4.3.5.tar.gz 309530 SHA256 38050d6792eb799d61e5e849f76971a9c7d45f467e5c04fbc4363062d8e7100d SHA512 b20c018da9a29d79fe0393fed5d29117729492ea8f36e72d4aeb98044a3de4a13331bd29e76ca552a08f6da764e57e69f9fb0325fc031551514d7a54b56c849a WHIRLPOOL 82fc7324bf1d934d69712629808d6b4178a5f2cdcf25351fb2fe2784f9cea0c1ec0aaaba7a3a08c84795108eb049394ceaab052af8cc0efbb0975064fa4e80e0
-EBUILD seaview-4.3.3.ebuild 2055 SHA256 8bf614878b49301579cb6ef242c0dc3daf591ac1f96cbdcb4bd90de0226d79df SHA512 1f76b0bcc9549801b99a9ef37888ae4446497922a7d7bf6700a960b143e5d5f16e1132d423fc34dcf327e2a36b17ceb51913b44d1dcd59ec25a54174118630f3 WHIRLPOOL 3cc0eb98191eef51bdf73fb1ca516c4ce23db40c14b65225b798ddda50db329c7401f9fb49764c32b8c0dbe2c449b754347e5e85503b7a1aa3ace2934e59c22a
EBUILD seaview-4.3.5.ebuild 2129 SHA256 da2de3848c89c61fcc3eb03a7b73ed4983411495efc85f6e37936a5ca385aa78 SHA512 7aec15443e8229672f9fd4586f325cb7a25792af822fa257112a7550b85887b1964c14b71279a9cd2fa130adae2442492a83aa2902b7ac3d43f94e0ba733a7ef WHIRLPOOL f420d1bfc7879faf3105e0517cc006bc1c2b541657a40817172c4f2a5840835aca62b662152d33bede7518b1949b3ea2643f6bad9a8d58def0f0a80f636aba7e
-MISC ChangeLog 8700 SHA256 fc55bb2ec64053b9209a26f33d1c296490ac68e980b36ae8c5048b1b1cc2a032 SHA512 a91056aac2b78f7f957add3ffdc2371206573b19dee0719cbd550a618882389629abb937d740192c0a4806db7f03de3d89cee81a3ea8f8d3f561efcb94b9a4cc WHIRLPOOL 04b63e7cce2e91de911edf5b23abf8819600fc2dabd34e6fda4d45ab58cb4420e021bd1bbdfcd1f1dbf96920c9a3e7ead887355e30b7277e153dd958f9799483
+MISC ChangeLog 8783 SHA256 0981ab2b9f7546a936e0e57ad0322f7007fc6a83e2b93f230acf665ac333d2bd SHA512 eb595983a51fc83a0d46ced9a6a5416ed2f61e7f1b33b8eeefbbb6979f486fba7582ce01a104ac28626d3ff17b7d4898613e09027f3d6f70bd42fb8e81b649f4 WHIRLPOOL 68f6eeda8f16a080a49467520b832a54341e9fbf265ac7e22d1e51f0f192edeecfc49e2716a860f2229577a194b90d2719756e6400e09b7ee68e91807a2fc19c
MISC metadata.xml 527 SHA256 48b9d9f18a3f5ffcef4ab6388dbc63debbbdbecef3636ff18a65142db5542d39 SHA512 7398c3188e6f2e31fce571a805823bc5058cff4834c85d822b50f51f52fd37659a1c80333a667986cd2ce530bc65aaf761615b6b34aa1877f87d92e47cb873a5 WHIRLPOOL 5c025aa29f1f6885f3caa94cceb31c362bc1ec5e7316bb6b4540977ded96bd63d1ff32646c89fc3548b5a71e3f5673e85c0ec11d186222bbc8f9c2f854e78850
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diff --git a/sci-biology/seaview/seaview-4.3.3.ebuild b/sci-biology/seaview/seaview-4.3.3.ebuild
deleted file mode 100644
index a87fadd532bd..000000000000
--- a/sci-biology/seaview/seaview-4.3.3.ebuild
+++ /dev/null
@@ -1,76 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-4.3.3.ebuild,v 1.6 2014/01/06 15:31:22 jlec Exp $
-
-EAPI=4
-
-inherit eutils multilib toolchain-funcs
-
-DESCRIPTION="A graphical multiple sequence alignment editor"
-HOMEPAGE="http://pbil.univ-lyon1.fr/software/seaview.html"
-SRC_URI="ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/${PN}_${PV}.tar.gz"
-
-LICENSE="public-domain"
-SLOT="0"
-KEYWORDS="amd64 x86"
-IUSE="+xft"
-
-DEPEND="
- sys-libs/zlib
- x11-libs/fltk:1
- x11-libs/libX11
- xft? (
- x11-libs/libXft
- x11-libs/fltk:1[xft] )"
-RDEPEND="${DEPEND}
- sci-biology/clustalw
- || ( sci-libs/libmuscle sci-biology/muscle )
- sci-biology/phyml"
-
-S="${WORKDIR}/${PN}"
-
-src_prepare() {
- # respect CXXFLAGS (package uses them as CFLAGS)
- sed \
- -e "s:^CXX.*:CXX = $(tc-getCXX):" \
- -e "s:\$(OPT):${CXXFLAGS}:" \
- -e "s:^OPT:#OPT:" \
- -e "s:^FLTK = /usr/include:FLTK = /usr/include/fltk-1:" \
- -e "s:^#IFLTK .*:IFLTK = $(fltk-config --use-images --cflags):" \
- -e "s:^#LFLTK .*:LFLTK = $(fltk-config --use-images --ldflags):" \
- -e "s:^USE_XFT:#USE_XFT:" \
- -e "s:^#HELPFILE:HELPFILE:" \
- -e "s:/usr/share/doc/seaview/seaview.htm:/usr/share/seaview/seaview.htm:" \
- -e "s:^#PHYMLNAME:PHYMLNAME:" \
- -e 's:-lXinerama::g' \
- -e 's:-lpng::g' \
- -e 's:-ljpeg::g' \
- -e 's:-lfontconfig::g' \
- -i Makefile || die "sed failed while editing Makefile"
-
- if use xft; then
- sed \
- -e "s:^#USE_XFT .*:USE_XFT = -DUSE_XFT $(pkg-config --cflags xft):" \
- -e "s:-lXft:$(pkg-config --libs xft):" \
- -i Makefile || die "sed failed while editing Makefile to enable xft"
- else
- sed -i -e "s:-lXft::" Makefile || die
- fi
- cd FL || die
- ln -sf . FL || die
-}
-
-src_install() {
- dobin seaview
-
- # /usr/share/seaview/seaview.html is hardcoded in the binary, see Makefile
- insinto /usr/share/seaview
- doins example.nxs seaview.html
-
- insinto /usr/share/seaview/images
- doins seaview.xpm
-
- make_desktop_entry seaview Seaview
-
- doman seaview.1
-}