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authorJustin Lecher <jlec@gentoo.org>2015-04-08 14:19:38 +0000
committerJustin Lecher <jlec@gentoo.org>2015-04-08 14:19:38 +0000
commite8998462afc86189f4db9978e9c816f012fb67b5 (patch)
tree6c24cdce260224ab7f8d2603f6cd11fc4776b649 /sci-biology
parentNew package written by me (diff)
downloadhistorical-e8998462afc86189f4db9978e9c816f012fb67b5.tar.gz
historical-e8998462afc86189f4db9978e9c816f012fb67b5.tar.bz2
historical-e8998462afc86189f4db9978e9c816f012fb67b5.zip
Drop old
Package-Manager: portage-2.2.18/cvs/Linux x86_64 Manifest-Sign-Key: 0xB9D4F231BD1558AB!
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/rebase/ChangeLog6
-rw-r--r--sci-biology/rebase/Manifest38
-rw-r--r--sci-biology/rebase/rebase-1502.ebuild46
-rw-r--r--sci-biology/rebase/rebase-1503.ebuild46
4 files changed, 23 insertions, 113 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index 70970cda6e70..a57ba1db947e 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/rebase
# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.152 2015/04/08 14:16:32 ago Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.153 2015/04/08 14:19:37 jlec Exp $
+
+ 08 Apr 2015; Justin Lecher <jlec@gentoo.org> -rebase-1502.ebuild,
+ -rebase-1503.ebuild:
+ Drop old
08 Apr 2015; Agostino Sarubbo <ago@gentoo.org> rebase-1503.ebuild:
Stable for ppc/x86, wrt bug #545430
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index f522dea0782c..75d2ce908360 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,28 +1,26 @@
-----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA256
+Hash: SHA512
-DIST rebase-1502.tar.xz 513837344 SHA256 9d579b7ea0c93a199defd94fc378871a87f1b238aacd87649a5ad3e63caa4c5b SHA512 945c884c0b940e374e47b41f53d2d24edbab3f627ac015ff6033e2fc1bab1599c20595d03c31ec60b9aaa9f25e9dad09012bfd347a152b2b2b27996e157b730a WHIRLPOOL a8b145ac4cbe2edff39fac9934d5d6d43bcf16a89988e9b5e82682911196adb33ba8681a2de65e3a6f7e136bc259476316bdb24f0e46d83ce5572effe99aaaac
-DIST rebase-1503.tar.xz 67267924 SHA256 6f808fd86bcc13f92a6ca876fa910260fc50bce50ac4bbe04e8d87cd2f9a4822 SHA512 83f2b1f0b44cb674ca99e1a5a917cd55621d6cd33d2d4d0c635af1bc958c038e6e77f5d1e2d03623010eaecb2ae88d050829797d90cb7142b83f6baace4e4d96 WHIRLPOOL 2e267cd39c626d61d33b37625c9bc56f8f83a84bfa709ac37790b90a400bf2b6e5577c34d7ced6db747dc37fb2aa72071da1e254ba185e81574eac301abd42a6
DIST rebase-1504.tar.xz 69726880 SHA256 70b02c6f4f51b091c31685cc6df5a0442f5fde258cd57d143b6c81a9d2f23190 SHA512 6b35b872bd5e1ee1a7cac72b7caccc03d13ce20e426a05e6c557353c067f6737b82de926dcf0dac5bcffe1c5ff72c76ce3e237d2df7044a7dfb5e930316edc42 WHIRLPOOL 5c72ce616e70d1f47979e1335aa0a5ae22eabad59d5cede5446a2c499a5e6127c4dd99ebb9e9ef09bf3c4b7bf439647e9fadf3e1b782e898039560a96cf6b65a
-EBUILD rebase-1502.ebuild 1201 SHA256 8254315ccf45f1d719edb055da9df005af439593655af0843e038b98816e6825 SHA512 8491d03cb395e4c8732b193dbf6bb3fb47cab25c5e234b8725d5c7c0f6ca41874d55aa9d35c6231d85ddb94cf00fe72654665e0161f92a09dc1c8588dc1b0d71 WHIRLPOOL e6075024c7606001da1ebfb4f481740e7fe921a5274f1f9ca94889b66045a4503c465ffa7333bdd4333fb762aaaee15ffd4accd18bd28d1a41bc5869dc0c4889
-EBUILD rebase-1503.ebuild 1201 SHA256 99f873f68a7a0f8d3acb0e48e4f36ddec16bfa7b360da359f217cf902346ecb1 SHA512 63d56f499e5affbae37f18446b28c9af9951164245c340edd45f83a22f92db001f83552b709842e471d0bf76f9599b335e120bb8fa6639780e9d822066585224 WHIRLPOOL eef085a30abfd1287615434d82a42a52302d05c501bda49e1072a8f55bf05977b7b9df94173985f0b6fa6897879b0265799140047537dfdf414d0b9b5ad942f8
EBUILD rebase-1504.ebuild 1205 SHA256 cb576c293a83a1dff42ec70702a72987a32daa28cb2a1219362121942950b9b8 SHA512 7a5feb4d674ca766c42cfed17552428d5647863cbe69fecc830198521cafdef037ce245c0d12163dff297d451cd0eff0979971a6177e5b9e467c40d6f1ff1406 WHIRLPOOL 3aec57502d2f9c68442265165151a20ae772b8f1bb050d418d0efbfd8816c5ba24d554ee29da3db87b10c6a38c5323474ad114e0e3e7935aec6f32f460280ec4
-MISC ChangeLog 19232 SHA256 d0f61538d17d7511b7645adf6567e0412d4f721b82ba1e3304f2f6fecd3b5300 SHA512 20a006f3ae32d85bc8261296f55c412c8846c18aa9d0ae92926f8532699b5a1266cc46ad1dbaf714473d1080dae751bfa337d9dd6f861fad8b13d04420f25dfc WHIRLPOOL 2237f062226157e66de0cd6e316beffb0c9c8ae7d8c9a2018a74ebb918b9d8bd734f92439c6dc9b28a673548fda6800e67bdf4a03479f531cf6668b0f3903d39
+MISC ChangeLog 19336 SHA256 e39c65ccd6ab89e13567469415a342217f80ba3a8ab955237046a5c601214785 SHA512 292c5fcc3dafdf705ffefbf59b735853cfd56ce32e5bdac14fb04f6c62d15f19f519d618c8d903786b0eded7637e4e2ba9b8f6d96709deaa885c0111e5fa80ce WHIRLPOOL 5b031c349f187e16f0825825993b7843ea28134e3a29a8292151b6b94967193bc7faff5bea83415791cc7c77ffe488afa22f13fdc510bfd7510e9b324666c8f6
MISC metadata.xml 813 SHA256 392179fd31cd6876ae2e2501faa8b0733704f03d0414c3668fee1f74a8462e56 SHA512 cfbd842c417a0384b17428cf36d866acbac2f89fa1496f45a908cf0d885879b2318fd21a173dc0a8ddae81c00d1c5a5646296473e199ced9028daeb004bea42a WHIRLPOOL 21c9d1a421d157ae6848a6fd99996566a3b51309e246a4aee531b0abab88698a5323d35a22430d9a21f5803402beac917f5cd295f23651f3889304bbeb65d015
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+Version: GnuPG v2.0
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diff --git a/sci-biology/rebase/rebase-1502.ebuild b/sci-biology/rebase/rebase-1502.ebuild
deleted file mode 100644
index 4f3164fc5595..000000000000
--- a/sci-biology/rebase/rebase-1502.ebuild
+++ /dev/null
@@ -1,46 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1502.ebuild,v 1.4 2015/03/25 14:06:48 ago Exp $
-
-EAPI=5
-
-MY_PV=${PV#1}
-
-DESCRIPTION="A restriction enzyme database"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
-
-SLOT="0"
-LICENSE="public-domain"
-KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
-IUSE="emboss minimal"
-
-RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
-DEPEND="${RDEPEND}"
-
-RESTRICT="binchecks strip"
-
-src_compile() {
- if use emboss; then
- echo; einfo "Indexing Rebase for usage with EMBOSS."
- mkdir REBASE || die
- EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
- -protofile proto.${MY_PV} -equivalences \
- || die "Indexing Rebase failed."
- echo
- fi
-}
-
-src_install() {
- if ! use minimal; then
- insinto /usr/share/${PN}
- doins withrefm.${MY_PV} proto.${MY_PV}
- fi
- newdoc REBASE.DOC README
- if use emboss; then
- insinto /usr/share/EMBOSS/data/REBASE
- doins REBASE/embossre.{enz,ref,sup}
- insinto /usr/share/EMBOSS/data
- doins REBASE/embossre.equ
- fi
-}
diff --git a/sci-biology/rebase/rebase-1503.ebuild b/sci-biology/rebase/rebase-1503.ebuild
deleted file mode 100644
index f033a3aa504e..000000000000
--- a/sci-biology/rebase/rebase-1503.ebuild
+++ /dev/null
@@ -1,46 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1503.ebuild,v 1.3 2015/04/08 14:16:32 ago Exp $
-
-EAPI=5
-
-MY_PV=${PV#1}
-
-DESCRIPTION="A restriction enzyme database"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
-
-SLOT="0"
-LICENSE="public-domain"
-KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
-IUSE="emboss minimal"
-
-RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
-DEPEND="${RDEPEND}"
-
-RESTRICT="binchecks strip"
-
-src_compile() {
- if use emboss; then
- echo; einfo "Indexing Rebase for usage with EMBOSS."
- mkdir REBASE || die
- EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
- -protofile proto.${MY_PV} -equivalences \
- || die "Indexing Rebase failed."
- echo
- fi
-}
-
-src_install() {
- if ! use minimal; then
- insinto /usr/share/${PN}
- doins withrefm.${MY_PV} proto.${MY_PV}
- fi
- newdoc REBASE.DOC README
- if use emboss; then
- insinto /usr/share/EMBOSS/data/REBASE
- doins REBASE/embossre.{enz,ref,sup}
- insinto /usr/share/EMBOSS/data
- doins REBASE/embossre.equ
- fi
-}