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authorOlivier Fisette <ribosome@gentoo.org>2005-01-30 17:14:13 +0000
committerOlivier Fisette <ribosome@gentoo.org>2005-01-30 17:14:13 +0000
commitffdbe8e60ac31521e1ee818b8b28123bf8f4afa1 (patch)
tree3def7486184ff647a4b2764454830a386748355f /sci-biology
parentnew upstream version, bumped. (diff)
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Ebuild cleanup
Package-Manager: portage-2.0.51-r15
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/njplot/ChangeLog5
-rw-r--r--sci-biology/njplot/njplot-20050109.ebuild4
-rw-r--r--sci-biology/phylip/ChangeLog5
-rw-r--r--sci-biology/phylip/phylip-3.63.ebuild9
-rw-r--r--sci-biology/primer3/ChangeLog5
-rw-r--r--sci-biology/primer3/primer3-1.0.0.ebuild4
-rw-r--r--sci-biology/rnaview/ChangeLog5
-rw-r--r--sci-biology/rnaview/rnaview-1.ebuild7
8 files changed, 29 insertions, 15 deletions
diff --git a/sci-biology/njplot/ChangeLog b/sci-biology/njplot/ChangeLog
index 951cebc87d63..dcd11ccce2fc 100644
--- a/sci-biology/njplot/ChangeLog
+++ b/sci-biology/njplot/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/njplot
# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/ChangeLog,v 1.4 2005/01/10 16:51:56 swegener Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/ChangeLog,v 1.5 2005/01/30 17:06:33 ribosome Exp $
+
+ 30 Jan 2005; Olivier Fisette <ribosome@gentoo.org> njplot-20050109.ebuild:
+ Ebuild cleanup.
09 Jan 2005; Olivier Fisette <ribosome@gentoo.org> njplot-20050109.ebuild:
Added to x86.
diff --git a/sci-biology/njplot/njplot-20050109.ebuild b/sci-biology/njplot/njplot-20050109.ebuild
index d7361e998269..65550ee5966a 100644
--- a/sci-biology/njplot/njplot-20050109.ebuild
+++ b/sci-biology/njplot/njplot-20050109.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/njplot-20050109.ebuild,v 1.2 2005/01/09 18:40:54 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/njplot-20050109.ebuild,v 1.3 2005/01/30 17:06:33 ribosome Exp $
DESCRIPTION="A phylogenetic tree drawing program which supports tree rooting"
HOMEPAGE="http://pbil.univ-lyon1.fr/software/njplot.html"
@@ -17,7 +17,7 @@ DEPEND="sci-biology/ncbi-tools
src_unpack() {
unpack ${A}
cd ${S}
- sed -i -e "s%njplot.help%/usr/share/doc/${PF}/njplot.help%" njplot-vib.c
+ sed -i -e "s%njplot.help%/usr/share/doc/${PF}/njplot.help%" njplot-vib.c || die
}
src_compile() {
diff --git a/sci-biology/phylip/ChangeLog b/sci-biology/phylip/ChangeLog
index c433d9c27ae7..ce14ceabb09c 100644
--- a/sci-biology/phylip/ChangeLog
+++ b/sci-biology/phylip/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/phylip
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/phylip/ChangeLog,v 1.5 2005/01/19 00:24:33 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/phylip/ChangeLog,v 1.6 2005/01/30 17:10:12 ribosome Exp $
+
+ 30 Jan 2005; Olivier Fisette <ribosome@gentoo.org> phylip-3.63.ebuild:
+ Ebuild cleanup.
18 Jan 2005; Olivier Fisette <ribosome@gentoo.org> phylip-3.63.ebuild:
Added to x86.
diff --git a/sci-biology/phylip/phylip-3.63.ebuild b/sci-biology/phylip/phylip-3.63.ebuild
index fb29c6b1150d..8ba3f433a7d8 100644
--- a/sci-biology/phylip/phylip-3.63.ebuild
+++ b/sci-biology/phylip/phylip-3.63.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/phylip/phylip-3.63.ebuild,v 1.4 2005/01/19 00:24:33 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/phylip/phylip-3.63.ebuild,v 1.5 2005/01/30 17:10:12 ribosome Exp $
inherit toolchain-funcs
@@ -19,9 +19,10 @@ DEPEND="virtual/libc
S=${WORKDIR}/${P}/src
src_compile() {
- sed -i -e "s/CFLAGS =/CFLAGS = ${CFLAGS}/" Makefile
- sed -i -e "s/CC = cc/CC = $(tc-getCC)/" Makefile
- sed -i -e "s/DC = cc/DC = $(tc-getCC)/" Makefile
+ sed -e "s/CFLAGS =/CFLAGS = ${CFLAGS}/" \
+ -e "s/CC = cc/CC = $(tc-getCC)/" \
+ -e "s/DC = cc/DC = $(tc-getCC)/" \
+ -i Makefile || die
mkdir ../fonts
emake -j1 all put || die
mv ../exe/font* ../fonts
diff --git a/sci-biology/primer3/ChangeLog b/sci-biology/primer3/ChangeLog
index aee6c62f97a6..0db9c708b7b3 100644
--- a/sci-biology/primer3/ChangeLog
+++ b/sci-biology/primer3/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/primer3
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/ChangeLog,v 1.4 2005/01/14 22:28:35 j4rg0n Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/ChangeLog,v 1.5 2005/01/30 17:12:23 ribosome Exp $
+
+ 30 Jan 2005; Olivier Fisette <ribosome@gentoo.org> primer3-1.0.0.ebuild:
+ Ebuild cleanup.
14 Jan 2005; Lina Pezzella <j4rg0n@gentoo.org> primer3-1.0.0.ebuild:
Stable ppc-macos.
diff --git a/sci-biology/primer3/primer3-1.0.0.ebuild b/sci-biology/primer3/primer3-1.0.0.ebuild
index 34ef00b7af35..2ab1fb1efdfc 100644
--- a/sci-biology/primer3/primer3-1.0.0.ebuild
+++ b/sci-biology/primer3/primer3-1.0.0.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/primer3-1.0.0.ebuild,v 1.3 2005/01/14 22:28:35 j4rg0n Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/primer3-1.0.0.ebuild,v 1.4 2005/01/30 17:12:23 ribosome Exp $
DESCRIPTION="Design primers for PCR reactions."
HOMEPAGE="http://frodo.wi.mit.edu/primer3/primer3_code.html"
@@ -21,7 +21,7 @@ src_unpack() {
unpack ${A}
if use ppc-macos; then
cd ${S}
- sed -e "s:LIBOPTS ='-static':LIBOPTS =:" -i Makefile
+ sed -e "s:LIBOPTS ='-static':LIBOPTS =:" -i Makefile || die
fi
}
diff --git a/sci-biology/rnaview/ChangeLog b/sci-biology/rnaview/ChangeLog
index 7c3dbf5542e9..f73aef0ae2e3 100644
--- a/sci-biology/rnaview/ChangeLog
+++ b/sci-biology/rnaview/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/rnaview
# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rnaview/ChangeLog,v 1.3 2005/01/19 00:26:09 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rnaview/ChangeLog,v 1.4 2005/01/30 17:14:13 ribosome Exp $
+
+ 30 Jan 2005; Olivier Fisette <ribosome@gentoo.org> rnaview-1.ebuild:
+ Ebuild cleanup.
18 Jan 2005; Olivier Fisette <ribosome@gentoo.org> rnaview-1.ebuild:
Added to x86.
diff --git a/sci-biology/rnaview/rnaview-1.ebuild b/sci-biology/rnaview/rnaview-1.ebuild
index a704581a8d58..05dbf65525c7 100644
--- a/sci-biology/rnaview/rnaview-1.ebuild
+++ b/sci-biology/rnaview/rnaview-1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rnaview/rnaview-1.ebuild,v 1.2 2005/01/19 00:26:09 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rnaview/rnaview-1.ebuild,v 1.3 2005/01/30 17:14:13 ribosome Exp $
inherit toolchain-funcs
@@ -16,8 +16,9 @@ IUSE=""
src_unpack() {
unpack ${A}
cd ${S}
- sed -i -e "s/CC = cc/CC = $(tc-getCC)/" Makefile
- sed -i -e "s/CFLAGS =/CFLAGS = ${CFLAGS}/" Makefile
+ sed -e "s/CC = cc/CC = $(tc-getCC)/" \
+ -e "s/CFLAGS =/CFLAGS = ${CFLAGS}/" \
+ -i Makefile || die
}
src_compile() {