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| author |   Repository mirror & CI <repomirrorci@gentoo.org> | 2018-07-17 21:47:54 +0000 |
|---|---|---|
| committer | Repository mirror & CI <repomirrorci@gentoo.org> | 2018-07-17 21:47:54 +0000 |
| commit | 1f7be5c011e3ddb7d7fa2d8822266b6112f0a621 (patch) | |
| tree | 45a1089b6fd97b678c04f9be21bf25b59f113a12 /metadata/md5-cache/sci-biology/tophat-2.1.1-r4 | |
| parent | Merge updates from master (diff) | |
| download | gentoo-1f7be5c011e3ddb7d7fa2d8822266b6112f0a621.tar.gz gentoo-1f7be5c011e3ddb7d7fa2d8822266b6112f0a621.tar.bz2 gentoo-1f7be5c011e3ddb7d7fa2d8822266b6112f0a621.zip | |
2018-07-17 21:47:53 UTC
Diffstat (limited to 'metadata/md5-cache/sci-biology/tophat-2.1.1-r4')
| -rw-r--r-- | metadata/md5-cache/sci-biology/tophat-2.1.1-r4 | 14 |
1 files changed, 14 insertions, 0 deletions
diff --git a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 new file mode 100644 index 000000000000..68f4acda67f6 --- /dev/null +++ b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 @@ -0,0 +1,14 @@ +DEFINED_PHASES=configure install postinst prepare setup +DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] dev-libs/boost:=[threads] dev-python/intervaltree[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] dev-python/sortedcontainers[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] sci-biology/samtools:0.1-legacy sci-biology/bowtie:2 virtual/pkgconfig sci-biology/seqan:1.4 >=sys-devel/autoconf-archive-2016.09.16 >=app-portage/elt-patches-20170422 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 +DESCRIPTION=Python-based splice junction mapper for RNA-Seq reads using bowtie2 +EAPI=6 +HOMEPAGE=https://ccb.jhu.edu/software/tophat/ +IUSE=debug python_targets_python2_7 +KEYWORDS=~amd64 ~x86 +LICENSE=Artistic +RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] dev-libs/boost:=[threads] dev-python/intervaltree[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] dev-python/sortedcontainers[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),-python_single_target_python3_7(-),python_single_target_python2_7(+)] sci-biology/samtools:0.1-legacy sci-biology/bowtie:2 +REQUIRED_USE=python_targets_python2_7 +SLOT=0 +SRC_URI=https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz +_eclasses_=autotools d0e5375d47f4c809f406eb892e531513 desktop 1b286a7e7143d8c4ec89cd0d2743a097 epatch 9a5f039771f143195164a15a4faa41a1 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils b43d08fe0771faf2f5e7be19c2789d33 flag-o-matic 5128c4729303400bd8d4b0b966530955 libtool 0081a71a261724730ec4c248494f044d ltprune 607e058da37aa6dabfa408b7d61da72e multilib 97f470f374f2e94ccab04a2fb21d811e preserve-libs ef207dc62baddfddfd39a164d9797648 python-single-r1 26fdbe5e685d53f67303a3a43d9e4848 python-utils-r1 7db901256449fef43c3aaa4d486c1c63 toolchain-funcs 1e35303c63cd707f6c3422b4493d5607 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf +_md5_=efee8069c83c578acac8e57b429ad985 |