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authorRepository mirror & CI <repomirrorci@gentoo.org>2021-08-30 17:51:34 +0000
committerRepository mirror & CI <repomirrorci@gentoo.org>2021-08-30 17:51:34 +0000
commit2cc7dd363eccbb244a9255519ec417b9e9f8f34a (patch)
tree688cf7dedfb67a70b46cab3215c23464fd4dad20 /metadata/md5-cache/sci-biology
parentMerge updates from master (diff)
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2021-08-30 17:51:31 UTC
Diffstat (limited to 'metadata/md5-cache/sci-biology')
-rw-r--r--metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r314
-rw-r--r--metadata/md5-cache/sci-biology/njplot-2.3-r213
-rw-r--r--metadata/md5-cache/sci-biology/psipred-3.514
3 files changed, 0 insertions, 41 deletions
diff --git a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r3 b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r3
deleted file mode 100644
index 973bcedad85e..000000000000
--- a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r3
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install prepare setup
-DEPEND=app-shells/tcsh dev-lang/perl media-libs/libpng:0= virtual/glu virtual/opengl X? ( media-libs/fontconfig x11-libs/motif:0= x11-libs/libICE x11-libs/libX11 x11-libs/libXft x11-libs/libXmu x11-libs/libXt ) virtual/pkgconfig
-DESCRIPTION=Development toolkit and applications for computational biology, including BLAST
-EAPI=5
-HOMEPAGE=https://www.ncbi.nlm.nih.gov/
-INHERIT=epatch flag-o-matic prefix toolchain-funcs
-IUSE=doc static-libs X
-KEYWORDS=~alpha amd64 ppc64 x86 ~amd64-linux ~x86-linux ~ppc-macos
-LICENSE=public-domain
-RDEPEND=app-shells/tcsh dev-lang/perl media-libs/libpng:0= virtual/glu virtual/opengl X? ( media-libs/fontconfig x11-libs/motif:0= x11-libs/libICE x11-libs/libX11 x11-libs/libXft x11-libs/libXmu x11-libs/libXt )
-SLOT=0
-SRC_URI=ftp://ftp.ncbi.nlm.nih.gov/blast/executables/release/2.2.26/ncbi.tar.gz -> ncbi-tools-2.2.26.tar.gz
-_eclasses_=estack 055c42df72f76a4f45ec92b35e83cd56 epatch 9f813bb3c47cf2e60619a663b87c5f4e toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa multilib 97566c1a256d07b00848aa767e38a352 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa preserve-libs dbc9f8d2d49c66467bc327fddd8317bd strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 prefix d04f14b297013ad1410550c0757f14f8
-_md5_=4a060d3447bfe5e557c4831b3fc8fad9
diff --git a/metadata/md5-cache/sci-biology/njplot-2.3-r2 b/metadata/md5-cache/sci-biology/njplot-2.3-r2
deleted file mode 100644
index 9e287cd93904..000000000000
--- a/metadata/md5-cache/sci-biology/njplot-2.3-r2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=install prepare
-DEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu
-DESCRIPTION=A phylogenetic tree drawing program which supports tree rooting
-EAPI=6
-HOMEPAGE=http://pbil.univ-lyon1.fr/software/njplot.html
-INHERIT=toolchain-funcs
-KEYWORDS=~amd64 ~x86
-LICENSE=public-domain
-RDEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu
-SLOT=0
-SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-2.3.tar.gz
-_eclasses_=toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa multilib 97566c1a256d07b00848aa767e38a352
-_md5_=c70b49c7f5e1a92f5169df372f9638c6
diff --git a/metadata/md5-cache/sci-biology/psipred-3.5 b/metadata/md5-cache/sci-biology/psipred-3.5
deleted file mode 100644
index c1fe1582383f..000000000000
--- a/metadata/md5-cache/sci-biology/psipred-3.5
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install postinst prepare
-DESCRIPTION=Protein Secondary Structure Prediction
-EAPI=5
-HOMEPAGE=http://bioinf.cs.ucl.ac.uk/psipred/
-INHERIT=epatch prefix toolchain-funcs versionator
-IUSE=test
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=psipred
-RDEPEND=app-shells/tcsh sci-biology/ncbi-tools sci-biology/update-blastdb
-RESTRICT=!test? ( test )
-SLOT=0
-SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.5.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz )
-_eclasses_=estack 055c42df72f76a4f45ec92b35e83cd56 epatch 9f813bb3c47cf2e60619a663b87c5f4e prefix d04f14b297013ad1410550c0757f14f8 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa multilib 97566c1a256d07b00848aa767e38a352 versionator d3fb3ba33acc3bbbdc4d7970227c100d
-_md5_=2d88f4808280c081fe9c75555b6d5c9e