2019-09-14 16:25:50 UTC

22 files changed, 1 insertions, 272 deletions

diff --git a/metadata/md5-cache/app-text/jpdftweak-0.9-r1 b/metadata/md5-cache/app-text/jpdftweak-0.9-r1
deleted file mode 100644
index 8cdc80640770..000000000000
--- a/metadata/md5-cache/app-text/jpdftweak-0.9-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install preinst prepare setup
-DEPEND=>=virtual/jdk-1.5 app-arch/unzip:0 dev-java/itext:0 dev-java/jgoodies-forms:0 >=dev-java/java-config-2.2.0-r3 >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2
-DESCRIPTION=Swiss Army Knife for PDF files
-EAPI=5
-HOMEPAGE=http://jpdftweak.sourceforge.net
-IUSE=elibc_FreeBSD elibc_FreeBSD
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-2
-RDEPEND=>=virtual/jre-1.5 dev-java/itext:0 dev-java/jgoodies-forms:0 >=dev-java/java-config-2.2.0-r3
-SLOT=0
-SRC_URI=mirror://sourceforge/jpdftweak/jpdftweak-src-0.9.zip
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-ant-2	6505e8068920164179b7e3926220c89f	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748
-_md5_=3b5bec4f4fcfc019714763ffc2ff10df
diff --git a/metadata/md5-cache/dev-java/itext-2.1.5-r2 b/metadata/md5-cache/dev-java/itext-2.1.5-r2
deleted file mode 100644
index 6c012221ce66..000000000000
--- a/metadata/md5-cache/dev-java/itext-2.1.5-r2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install preinst prepare setup unpack
-DEPEND=dev-java/bcmail:1.45 dev-java/bcprov:1.45 rups? ( dev-java/dom4j:1 dev-java/pdf-renderer:0 ) >=virtual/jdk-1.5 cjk? ( app-arch/unzip ) >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip ) >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2
-DESCRIPTION=Generate documents in the Portable Document Format (PDF) and/or HTML
-EAPI=4
-HOMEPAGE=https://itextpdf.com
-IUSE=cjk rtf rups elibc_FreeBSD doc source elibc_FreeBSD
-KEYWORDS=amd64 ppc64 x86 ~amd64-linux ~x86-linux
-LICENSE=MPL-1.1
-RDEPEND=dev-java/bcmail:1.45 dev-java/bcprov:1.45 rups? ( dev-java/dom4j:1 dev-java/pdf-renderer:0 ) >=virtual/jre-1.5 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
-SLOT=0
-SRC_URI=mirror://sourceforge/itext/iText-src-2.1.5.tar.gz cjk? ( mirror://sourceforge/itext/iTextAsian.jar mirror://sourceforge/itext/iTextAsianCmaps.jar )
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-ant-2	6505e8068920164179b7e3926220c89f	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748
-_md5_=0f6b361b9ec84ec0328a603262365be1
diff --git a/metadata/md5-cache/dev-java/itext-5.5.4-r2 b/metadata/md5-cache/dev-java/itext-5.5.4-r2
deleted file mode 100644
index e7ab16671b4a..000000000000
--- a/metadata/md5-cache/dev-java/itext-5.5.4-r2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install preinst prepare setup
-DEPEND=dev-java/bcmail:1.52 dev-java/bcpkix:1.52 dev-java/bcprov:1.52 dev-java/xml-security:0 >=virtual/jdk-1.6 app-arch/unzip >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
-DESCRIPTION=Generate documents in the Portable Document Format (PDF) and/or HTML
-EAPI=5
-HOMEPAGE=https://itextpdf.com
-IUSE=elibc_FreeBSD doc source elibc_FreeBSD
-KEYWORDS=amd64 x86
-LICENSE=AGPL-3
-RDEPEND=dev-java/bcmail:1.52 dev-java/bcpkix:1.52 dev-java/bcprov:1.52 dev-java/xml-security:0 >=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
-SLOT=5
-SRC_URI=mirror://sourceforge/itext/itext-5.5.4.zip
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-pkg-simple	3e71074eb6884746b37b70b2c9c881f4	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748
-_md5_=ca9f33a0482442803cf22a5d798ad53c
diff --git a/metadata/md5-cache/dev-java/jsap-2.1-r2 b/metadata/md5-cache/dev-java/jsap-2.1-r2
deleted file mode 100644
index a0785d08dd5c..000000000000
--- a/metadata/md5-cache/dev-java/jsap-2.1-r2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install preinst prepare setup
-DEPEND=dev-java/xstream:0 dev-java/ant-core:0 >=virtual/jdk-1.6 source? ( app-arch/zip ) >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
-DESCRIPTION=Java Simple Arguments Parser (JSAP)
-EAPI=5
-HOMEPAGE=https://sourceforge.net/projects/jsap
-IUSE=elibc_FreeBSD doc source elibc_FreeBSD
-KEYWORDS=amd64 ppc64 x86
-LICENSE=LGPL-2.1
-RDEPEND=dev-java/xstream:0 dev-java/ant-core:0 >=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
-SLOT=0
-SRC_URI=mirror://sourceforge/jsap/JSAP-2.1-src.tar.gz -> jsap-2.1.tar.gz
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-pkg-simple	3e71074eb6884746b37b70b2c9c881f4	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748
-_md5_=73a464b058edc4e5c0504aaa6ae03d8a
diff --git a/metadata/md5-cache/dev-java/xstream-1.4.8-r2 b/metadata/md5-cache/dev-java/xstream-1.4.8-r2
deleted file mode 100644
index fae98e113154..000000000000
--- a/metadata/md5-cache/dev-java/xstream-1.4.8-r2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install preinst prepare setup
-DEPEND=dev-java/xom:0 dev-java/xpp3:0 dev-java/jdom:0 dev-java/jdom:2 dev-java/kxml:2 dev-java/cglib:3 dev-java/dom4j:1 dev-java/joda-time:0 dev-java/jettison:0 >=virtual/jdk-1.8 app-arch/unzip >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
-DESCRIPTION=A text-processing Java API that serialize objects to XML and back again
-EAPI=5
-HOMEPAGE=http://x-stream.github.io
-IUSE=elibc_FreeBSD doc source elibc_FreeBSD
-KEYWORDS=amd64 ppc64 x86
-LICENSE=BSD
-RDEPEND=dev-java/xom:0 dev-java/xpp3:0 dev-java/jdom:0 dev-java/jdom:2 dev-java/kxml:2 dev-java/cglib:3 dev-java/dom4j:1 dev-java/joda-time:0 dev-java/jettison:0 >=virtual/jre-1.8 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
-SLOT=0
-SRC_URI=http://central.maven.org/maven2/com/thoughtworks/xstream/xstream/1.4.8/xstream-1.4.8-sources.jar -> xstream-1.4.8.jar
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-pkg-simple	3e71074eb6884746b37b70b2c9c881f4	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748
-_md5_=842ee09f8c4d8300e3aa74fc622d9638
diff --git a/metadata/md5-cache/dev-lang/pasm-1.7 b/metadata/md5-cache/dev-lang/pasm-1.7
deleted file mode 100644
index 0eca8ab266c1..000000000000
--- a/metadata/md5-cache/dev-lang/pasm-1.7
+++ /dev/null
@@ -1,10 +0,0 @@
-DEFINED_PHASES=compile install unpack
-DESCRIPTION=A portable assembler for processors of the PowerPC family
-EAPI=0
-HOMEPAGE=http://sun.hasenbraten.de/~frank/projects/
-KEYWORDS=~ppc ~ppc-macos
-LICENSE=GPL-2
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~mgorny/dist/pasm-1.7.tar.gz
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=d63158136600c8c163fabf45b7d1539c
diff --git a/metadata/md5-cache/dev-util/deskzilla-1.7.1-r1 b/metadata/md5-cache/dev-util/deskzilla-1.7.1-r1
deleted file mode 100644
index 00211d80f4eb..000000000000
--- a/metadata/md5-cache/dev-util/deskzilla-1.7.1-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile install postinst preinst prepare setup unpack
-DEPEND=>=dev-java/java-config-2.2.0-r3
-DESCRIPTION=A desktop client for Mozilla's Bugzilla bug tracking system
-EAPI=5
-HOMEPAGE=http://almworks.com/deskzilla
-IUSE=elibc_FreeBSD
-KEYWORDS=~amd64 ~x86
-LICENSE=ALMWorks-1.2
-RDEPEND=>=virtual/jre-1.5 dev-java/picocontainer:1 dev-java/javolution:4 >=dev-java/commons-codec-1.3 >=dev-java/jgoodies-forms-1.0.7 >=dev-java/commons-logging-1.0.4 >=dev-java/xmlrpc-2.0.1 dev-java/xerces:2 dev-java/itext:0 dev-java/jazzy:0 >=dev-java/java-config-2.2.0-r3
-RESTRICT=mirror
-SLOT=0
-SRC_URI=http://d1.almworks.com/.files/deskzilla-1_7_1_without_jre.tar.gz https://dev.gentoo.org/~ercpe/distfiles/dev-util/deskzilla/deskzilla_gentoo.license
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748
-_md5_=e7c68ae80698d1df6d74c62e2891a304
diff --git a/metadata/md5-cache/media-sound/tuxguitar-1.3.2 b/metadata/md5-cache/media-sound/tuxguitar-1.3.2
deleted file mode 100644
index 09aecf99680b..000000000000
--- a/metadata/md5-cache/media-sound/tuxguitar-1.3.2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install postinst postrm preinst prepare setup
-DEPEND=dev-java/swt:3.7[cairo] alsa? ( media-libs/alsa-lib ) pdf? ( dev-java/itext:5 ) fluidsynth? ( <media-sound/fluidsynth-2:= ) lilypond? ( media-sound/lilypond ) >=virtual/jdk-1.5 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip ) >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2
-DESCRIPTION=Multitrack guitar tablature editor and player written in Java-SWT
-EAPI=6
-HOMEPAGE=http://www.tuxguitar.com.ar/
-IUSE=alsa fluidsynth jack lilypond oss pdf timidity tray elibc_FreeBSD source elibc_FreeBSD
-KEYWORDS=~amd64 ~x86
-LICENSE=LGPL-2.1
-RDEPEND=dev-java/swt:3.7[cairo] alsa? ( media-libs/alsa-lib ) pdf? ( dev-java/itext:5 ) fluidsynth? ( <media-sound/fluidsynth-2:= ) lilypond? ( media-sound/lilypond ) >=virtual/jre-1.5 timidity? ( media-sound/timidity++[alsa?,oss?] ) >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
-SLOT=0
-SRC_URI=mirror://sourceforge/tuxguitar/tuxguitar-1.3.2-src.tar.gz
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	flag-o-matic	7ba73aee7fe4462b3a745e3645ab92ca	java-ant-2	6505e8068920164179b7e3926220c89f	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
-_md5_=f565db59f725f7a73f07718dfe4a8d7a
diff --git a/metadata/md5-cache/net-misc/java-wakeonlan-1.0.0-r2 b/metadata/md5-cache/net-misc/java-wakeonlan-1.0.0-r2
deleted file mode 100644
index 0b308359898a..000000000000
--- a/metadata/md5-cache/net-misc/java-wakeonlan-1.0.0-r2
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install preinst prepare setup test unpack
-DEPEND=>=virtual/jdk-1.6 app-arch/unzip test? ( dev-java/ant-junit:0 ) dev-java/jsap:0 dev-java/junit:4 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip ) >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2
-DESCRIPTION=A wakeonlan commandline tool and Java library
-EAPI=5
-HOMEPAGE=http://www.moldaner.de/wakeonlan/
-IUSE=test elibc_FreeBSD doc source elibc_FreeBSD
-KEYWORDS=amd64 x86
-LICENSE=GPL-2
-RDEPEND=>=virtual/jre-1.6 dev-java/jsap:0 dev-java/junit:4 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
-SLOT=0
-SRC_URI=http://www.moldaner.de/wakeonlan/download/wakeonlan-1.0.0.zip
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-ant-2	6505e8068920164179b7e3926220c89f	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748
-_md5_=00ca50fcaf4b50c543bc77a54fb5fbba
diff --git a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1
deleted file mode 100644
index 60be13cc49bc..000000000000
--- a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install preinst prepare setup
-DEPEND=>=virtual/jdk-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev-java/commons-io:1 dev-java/protobuf-java:0 dev-java/fastutil:0 dev-java/log4j dev-java/jsap dev-java/commons-configuration dev-java/commons-math:2 >=dev-java/java-config-2.2.0-r3 >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2
-DESCRIPTION=A DNA sequencing data management framework
-EAPI=4
-HOMEPAGE=http://campagnelab.org/software/goby/
-IUSE=+cpp elibc_FreeBSD elibc_FreeBSD
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-3 LGPL-3
-RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev-java/commons-io:1 dev-java/protobuf-java:0 dev-java/fastutil:0 dev-java/log4j dev-java/jsap dev-java/commons-configuration dev-java/commons-math:2 cpp? ( ~sci-biology/goby-cpp-1.9.7.3 ) >=dev-java/java-config-2.2.0-r3
-SLOT=0
-SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-deps.zip
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-ant-2	6505e8068920164179b7e3926220c89f	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748
-_md5_=d8bbf59f45f0b32b55de88f3c5233883
diff --git a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1
deleted file mode 100644
index 997ee7b18be7..000000000000
--- a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install preinst prepare setup
-DEPEND=>=virtual/jdk-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev-java/commons-io:1 dev-java/protobuf-java:0 dev-java/fastutil:0 dev-java/log4j dev-java/jsap dev-java/commons-configuration dev-java/commons-math:2 >=dev-java/java-config-2.2.0-r3 >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2
-DESCRIPTION=A DNA sequencing data management framework
-EAPI=4
-HOMEPAGE=http://campagnelab.org/software/goby/
-IUSE=+cpp elibc_FreeBSD elibc_FreeBSD
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-3 LGPL-3
-RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev-java/commons-io:1 dev-java/protobuf-java:0 dev-java/fastutil:0 dev-java/log4j dev-java/jsap dev-java/commons-configuration dev-java/commons-math:2 cpp? ( ~sci-biology/goby-cpp-1.9.8.1 ) >=dev-java/java-config-2.2.0-r3
-SLOT=0
-SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-deps.zip
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-ant-2	6505e8068920164179b7e3926220c89f	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748
-_md5_=d8bbf59f45f0b32b55de88f3c5233883
diff --git a/metadata/md5-cache/sci-chemistry/jmol-12.0.45-r1 b/metadata/md5-cache/sci-chemistry/jmol-12.0.45-r1
deleted file mode 100644
index 3f67ff391865..000000000000
--- a/metadata/md5-cache/sci-chemistry/jmol-12.0.45-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install postinst preinst prepare prerm setup
-DEPEND=>=virtual/jdk-1.4 !client-only? ( >=app-admin/webapp-config-1.50.15 ) dev-java/commons-cli:1 dev-java/itext:0 sci-libs/jmol-acme:0 sci-libs/vecmath-objectclub:0 >=dev-java/java-config-2.2.0-r3 >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2
-DESCRIPTION=Java molecular viever for 3-D chemical structures
-EAPI=5
-HOMEPAGE=http://jmol.sourceforge.net/
-IUSE=client-only vhosts elibc_FreeBSD elibc_FreeBSD
-KEYWORDS=~amd64 ~x86
-LICENSE=LGPL-2.1
-RDEPEND=>=virtual/jre-1.4 dev-java/commons-cli:1 dev-java/itext:0 sci-libs/jmol-acme:0 sci-libs/vecmath-objectclub:0 >=dev-java/java-config-2.2.0-r3
-SLOT=0
-SRC_URI=mirror://sourceforge/jmol/Jmol-12.0.45-full.tar.gz https://dev.gentoo.org/~jlec/distfiles/jmol-selfSignedCertificate.store.tar
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-ant-2	6505e8068920164179b7e3926220c89f	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748	webapp	16783e418aca3ffa461d68310bf7ab12
-_md5_=e5be2ed02e2c454e5aae9177da649849
diff --git a/metadata/md5-cache/sci-chemistry/jmol-12.2.27-r1 b/metadata/md5-cache/sci-chemistry/jmol-12.2.27-r1
deleted file mode 100644
index b51a6b97d62a..000000000000
--- a/metadata/md5-cache/sci-chemistry/jmol-12.2.27-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install postinst preinst prepare prerm setup
-DEPEND=>=virtual/jdk-1.5 dev-java/saxon:6.5 !client-only? ( >=app-admin/webapp-config-1.50.15 ) dev-java/commons-cli:1 dev-java/itext:0 sci-libs/jmol-acme:0 sci-libs/vecmath-objectclub:0 sci-libs/naga >=dev-java/java-config-2.2.0-r3 >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2
-DESCRIPTION=Java molecular viever for 3-D chemical structures
-EAPI=5
-HOMEPAGE=http://jmol.sourceforge.net/
-IUSE=+client-only vhosts elibc_FreeBSD elibc_FreeBSD
-KEYWORDS=~amd64 ~x86
-LICENSE=LGPL-2.1
-RDEPEND=>=virtual/jre-1.5 dev-java/commons-cli:1 dev-java/itext:0 sci-libs/jmol-acme:0 sci-libs/vecmath-objectclub:0 sci-libs/naga >=dev-java/java-config-2.2.0-r3
-SLOT=0
-SRC_URI=mirror://sourceforge/jmol/Jmol-12.2.27-full.tar.gz https://dev.gentoo.org/~jlec/distfiles/jmol-selfSignedCertificate.store.tar
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-ant-2	6505e8068920164179b7e3926220c89f	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748	webapp	16783e418aca3ffa461d68310bf7ab12
-_md5_=dd96053fe27646ae0427b3558cdddbb9
diff --git a/metadata/md5-cache/sci-mathematics/cvc3-2.4.1-r1 b/metadata/md5-cache/sci-mathematics/cvc3-2.4.1-r1
deleted file mode 100644
index c7a039e812cd..000000000000
--- a/metadata/md5-cache/sci-mathematics/cvc3-2.4.1-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install postinst postrm prepare test
-DEPEND=dev-libs/gmp:0= isabelle? ( >=sci-mathematics/isabelle-2011.1-r1:= ) doc? ( app-doc/doxygen media-gfx/graphviz ) emacs? ( virtual/emacs )
-DESCRIPTION=CVC3 is a theorem prover for Satisfiability Modulo Theories (SMT) problems
-EAPI=6
-HOMEPAGE=http://www.cs.nyu.edu/acsys/cvc3/index.html
-IUSE=doc emacs isabelle test zchaff
-KEYWORDS=~amd64 ~x86
-LICENSE=BSD MIT HPND zchaff? ( zchaff )
-RDEPEND=dev-libs/gmp:0= isabelle? ( >=sci-mathematics/isabelle-2011.1-r1:= )
-RESTRICT=mirror zchaff? ( bindist )
-SLOT=0/2.4.1
-SRC_URI=http://www.cs.nyu.edu/acsys/cvc3/releases/2.4.1/cvc3-2.4.1.tar.gz
-_eclasses_=elisp-common	23f47b2e1de7abf387105eddd1318738
-_md5_=8608106c2cd70e714c86a2517952dc13
diff --git a/metadata/md5-cache/sci-mathematics/e-1.8-r1 b/metadata/md5-cache/sci-mathematics/e-1.8-r1
deleted file mode 100644
index 62bb0cfb85ce..000000000000
--- a/metadata/md5-cache/sci-mathematics/e-1.8-r1
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=configure install postinst postrm
-DEPEND=isabelle? ( >=sci-mathematics/isabelle-2011.1-r1:= )
-DESCRIPTION=E is a theorem prover for full first-order logic with equality
-EAPI=6
-HOMEPAGE=http://www4.informatik.tu-muenchen.de/~schulz/E/E.html
-IUSE=doc examples isabelle
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-2
-RDEPEND=isabelle? ( >=sci-mathematics/isabelle-2011.1-r1:= )
-SLOT=0/1.8
-SRC_URI=http://www4.in.tum.de/~schulz/WORK/E_DOWNLOAD/V_1.8/E.tgz -> E-1.8.tgz
-_md5_=28abdb22b74604a0073f704123a5e14f
diff --git a/metadata/md5-cache/sci-mathematics/e-2.3 b/metadata/md5-cache/sci-mathematics/e-2.3
deleted file mode 100644
index 971fe28c9cf6..000000000000
--- a/metadata/md5-cache/sci-mathematics/e-2.3
+++ /dev/null
@@ -1,11 +0,0 @@
-DEFINED_PHASES=compile configure install prepare
-DEPEND=doc? ( dev-texlive/texlive-latex )
-DESCRIPTION=E is a theorem prover for full first-order logic with equality
-EAPI=7
-HOMEPAGE=https://wwwlehre.dhbw-stuttgart.de/~sschulz/E/E.html
-IUSE=doc examples
-KEYWORDS=~amd64 ~x86
-LICENSE=GPL-2
-SLOT=0/2.3
-SRC_URI=http://wwwlehre.dhbw-stuttgart.de/~sschulz/WORK/E_DOWNLOAD/V_2.3/E.tgz -> E-2.3.tgz
-_md5_=0c7ea47c3fc08ba2d5f2ca8f6557c836
diff --git a/metadata/md5-cache/sci-mathematics/isabelle-2016.1 b/metadata/md5-cache/sci-mathematics/isabelle-2016.1
deleted file mode 100644
index e2e317eac99c..000000000000
--- a/metadata/md5-cache/sci-mathematics/isabelle-2016.1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install postinst preinst prepare pretend setup unpack
-DEPEND=>=app-shells/bash-3.0:* >=dev-java/jcommon-1.0.18:1.0 dev-java/jortho:0 >=dev-java/jfreechart-1.0.14:1.0 >=dev-java/itext-2.1.5:0 dev-java/xz-java:0 >=dev-lang/ghc-7.6.3 >=dev-lang/polyml-5.6:=[-portable] >=dev-lang/perl-5.8.8-r2 >=dev-lang/swi-prolog-6.6.6 sci-libs/coinor-csdp =sci-mathematics/z3-4.4*[isabelle] >=virtual/jdk-1.8 doc? ( virtual/latex-base dev-tex/rail ) dev-lang/scala:2.12 ledit? ( app-misc/ledit ) readline? ( app-misc/rlwrap ) >=dev-java/java-config-2.2.0-r3
-DESCRIPTION=Isabelle is a generic proof assistant
-EAPI=6
-HOMEPAGE=http://www.cl.cam.ac.uk/research/hvg/Isabelle/index.html
-IUSE=doc graphbrowsing ledit readline elibc_FreeBSD
-KEYWORDS=~amd64 ~x86
-LICENSE=BSD
-RDEPEND=dev-perl/libwww-perl sci-mathematics/sha1-polyml >=virtual/jre-1.8 >=dev-java/java-config-2.2.0-r3
-SLOT=0/2016.1
-SRC_URI=http://isabelle.in.tum.de/website-Isabelle2016-1/dist/Isabelle2016-1.tar.gz http://isabelle.in.tum.de/dist/contrib/bash_process-1.2.1.tar.gz -> bash_process-isabelle-component-1.2.1.tar.gz https://dev.gentoo.org/~gienah/snapshots/csdp-isabelle-component-6.x.tar.gz http://isabelle.in.tum.de/dist/contrib/isabelle_fonts-20160830.tar.gz -> isabelle_fonts-isabelle-component-20160830.tar.gz http://isabelle.in.tum.de/components/jortho-1.0-2.tar.gz -> jortho-isabelle-component-1.0-2.tar.gz http://isabelle.in.tum.de/components/jedit_build-20161024.tar.gz -> jedit_build-isabelle-component-20161024.tar.gz http://isabelle.in.tum.de/dist/contrib/jfreechart-1.0.14-1.tar.gz -> jfreechart-isabelle-component-1.0.14-1.tar.gz https://dev.gentoo.org/~gienah/snapshots/polyml-isabelle-component-5.6-1.tar.gz http://isabelle.in.tum.de/dist/contrib/ssh-java-20161009.tar.gz -> ssh-java-isabelle-component-20161009.tar.gz https://dev.gentoo.org/~gienah/snapshots/xz-java-isabelle-component-1.5.tar.gz
-_eclasses_=check-reqs	5e40a693d9c828e8f3655184116e8b73	desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748
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diff --git a/metadata/md5-cache/sci-mathematics/kodkodi-1.5.2-r1 b/metadata/md5-cache/sci-mathematics/kodkodi-1.5.2-r1
deleted file mode 100644
index 79c50aea2a3e..000000000000
--- a/metadata/md5-cache/sci-mathematics/kodkodi-1.5.2-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install postinst postrm preinst prepare setup
-DEPEND=dev-java/antlr:3 =sci-mathematics/kodkod-1.5*:= >=virtual/jdk-1.6 app-arch/unzip >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
-DESCRIPTION=A text front-end for the Kodkod Java library
-EAPI=6
-HOMEPAGE=http://www21.in.tum.de/~blanchet/#software
-IUSE=isabelle examples elibc_FreeBSD doc source elibc_FreeBSD
-KEYWORDS=~amd64 ~x86
-LICENSE=BSD
-RDEPEND=dev-java/antlr:3 =sci-mathematics/kodkod-1.5*:= isabelle? ( sci-mathematics/isabelle:= ) >=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip )
-SLOT=0/1.5.2
-SRC_URI=http://www21.in.tum.de/~blanchet/kodkodi-1.5.2.tgz
-_eclasses_=desktop	b1d22ac8bdd4679ab79c71aca235009d	eapi7-ver	756b3f27d8e46131d5cf3c51bd876446	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	java-pkg-2	c4e6af2574fd1dc79b43a6e27af4b5fb	java-pkg-simple	3e71074eb6884746b37b70b2c9c881f4	java-utils-2	dd352559d0e143500ec878acc74da909	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	versionator	2352c3fc97241f6a02042773c8287748
-_md5_=7b835e454dc87a1437101515f9ac1a38
diff --git a/metadata/md5-cache/sci-mathematics/spass-3.9 b/metadata/md5-cache/sci-mathematics/spass-3.9
deleted file mode 100644
index bae699d2dbbc..000000000000
--- a/metadata/md5-cache/sci-mathematics/spass-3.9
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile install postinst postrm unpack
-DEPEND=isabelle? ( sci-mathematics/isabelle:= )
-DESCRIPTION=An Automated Theorem Prover for First-Order Logic with Equality
-EAPI=7
-HOMEPAGE=http://www.spass-prover.org/
-IUSE=isabelle
-KEYWORDS=~amd64 ~x86
-LICENSE=BSD-2
-RDEPEND=isabelle? ( sci-mathematics/isabelle:= )
-SLOT=0/3.9
-SRC_URI=http://www.spass-prover.org/download/sources/spass39.tgz
-_eclasses_=multilib	1d91b03d42ab6308b5f4f6b598ed110e	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a
-_md5_=833c8ef8eff5f69f461e9ad75176255b
diff --git a/metadata/md5-cache/sys-apps/lomoco-1.0-r9 b/metadata/md5-cache/sys-apps/lomoco-1.0-r9
deleted file mode 100644
index 8d04f878b6b7..000000000000
--- a/metadata/md5-cache/sys-apps/lomoco-1.0-r9
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile install prepare
-DEPEND=virtual/libusb:0 virtual/pkgconfig >=app-portage/elt-patches-20170815 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 virtual/pkgconfig
-DESCRIPTION=Lomoco can configure vendor-specific options on Logitech USB mice
-EAPI=4
-HOMEPAGE=http://www.lomoco.org/
-KEYWORDS=~alpha amd64 x86
-LICENSE=GPL-2
-RDEPEND=virtual/libusb:0
-SLOT=0
-SRC_URI=http://www.lomoco.org/lomoco-1.0.tar.gz
-_eclasses_=autotools	1bf086cdd7356f5c9a4acd9727bd2065	desktop	b1d22ac8bdd4679ab79c71aca235009d	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	libtool	f143db5a74ccd9ca28c1234deffede96	ltprune	2729691420b6deeda2a90b1f1183fb55	multilib	1d91b03d42ab6308b5f4f6b598ed110e	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	2f8b8f320bee13b71a8a54cc6d09e08a	udev	452708c3f55cf6e918b045adb949a9e6	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf
-_md5_=305bb90aebed04283926571fb8802a50
diff --git a/metadata/pkg_desc_index b/metadata/pkg_desc_index
index f351d2114381..d80af00df627 100644
--- a/metadata/pkg_desc_index
+++ b/metadata/pkg_desc_index
@@ -2465,7 +2465,6 @@ app-text/jabref 2.10-r2 2.10-r4: Java GUI for managing BibTeX and other bibliogr
 app-text/jabref-bin 3.7 3.8 3.8.1 3.8.2 4.0 4.1 4.3.1 4.9999: Java GUI manages bibliographies in a BibTeX database
 app-text/jadetex 3.13-r7: TeX macros used by Jade TeX output
 app-text/jo 1.1: JSON output from a shell
-app-text/jpdftweak 0.9-r1: Swiss Army Knife for PDF files
 app-text/kbibtex 0.9: BibTeX editor to edit bibliographies used with LaTeX
 app-text/kchmviewer 7.7-r1: Feature rich chm file viewer, based on Qt
 app-text/keepnote 0.7.9-r2: A note taking application
@@ -4241,7 +4240,6 @@ dev-java/iso-relax 20050331-r4: Interfaces useful for applications which support
 dev-java/istack-commons-buildtools 2.22-r1: IStack Commons - Buildtools jar
 dev-java/istack-commons-runtime 2.22: IStack Commons - Runtime jar
 dev-java/istack-commons-soimp 2.22: IStack Commons - Soimp jar
-dev-java/itext 2.1.5-r2 5.5.4-r2: Generate documents in the Portable Document Format (PDF) and/or HTML
 dev-java/j2objc-annotations 1.2: Annotations for the J2ObjC Java to Objective-C translator
 dev-java/j2ssh 0.2.9: Java implementation of the SSH protocol
 dev-java/jackcess 1.2.14.3: Pure Java library for reading from and writing to MS Access databases
@@ -4356,7 +4354,6 @@ dev-java/jreleaseinfo 1.3.0-r2: Ant Task for build-time creation of Java source
 dev-java/jrexx 1.1.1-r2: API for textual pattern matching based on the finite state automaton theory
 dev-java/jrobin 1.6.0-r1: JRobin is a 100% pure Java alternative to RRDTool
 dev-java/jrrd 1.0.1-r2: Java Interface to Tobias Oetiker's RRDtool
-dev-java/jsap 2.1-r2: Java Simple Arguments Parser (JSAP)
 dev-java/jsch 0.1.52 0.1.54: JSch is a pure Java implementation of SSH2
 dev-java/json 20150729 20160212: Java implementation of the JavaScript Object Notation
 dev-java/json-simple 1.1-r1: Simple Java toolkit for JSON
@@ -4575,7 +4572,6 @@ dev-java/xpp2 2.1.10-r2: A streaming pull XML parser used to quickly process inp
 dev-java/xpp3 1.1.4c-r3 1.1.4c-r4: An implementation of XMLPULL V1 API
 dev-java/xsdlib 20090415: Sun XML Datatypes Library
 dev-java/xsom 20140925: XSOM is a Java library allows to easily parse and inspect XML schema docs
-dev-java/xstream 1.4.8-r2: A text-processing Java API that serialize objects to XML and back again
 dev-java/xz-java 1.8: Implementation of xz data compression in pure java
 dev-java/yanfs 1.0: Yet Another NFS - a Java NFS library
 dev-java/zeus-jscl 1.64-r1: Zeus Java Swing Components Library
@@ -4649,7 +4645,6 @@ dev-lang/opendylan 2013.1-r1 2013.2 2014.1 9999: OpenDylan language runtime envi
 dev-lang/opendylan-bin 2011.1 2012.1 2013.1 2013.2 2014.1 2019.1: OpenDylan language runtime environment (prebuilt)
 dev-lang/orc 0.4.28-r1 0.4.29: The Oil Runtime Compiler, a just-in-time compiler for array operations
 dev-lang/parrot 7.1.0-r1 7.5.0-r1 7.11.0-r1 8.1.0-r1 8.1.0-r2: Virtual machine designed to compile and execute bytecode for dynamic languages
-dev-lang/pasm 1.7: A portable assembler for processors of the PowerPC family
 dev-lang/pcc 1.1.0-r1 9999: pcc portable c compiler
 dev-lang/perl 5.24.3-r1 5.24.4 5.26.2 5.28.2-r1 5.28.9999 5.30.0: Larry Wall's Practical Extraction and Report Language
 dev-lang/php 5.6.40-r6 7.1.31 7.1.32 7.2.21 7.2.22 7.3.8 7.3.9 7.4.0_beta1 7.4.0_beta4 7.4.0_rc1: The PHP language runtime engine
@@ -10695,7 +10690,6 @@ dev-util/debootstrap 1.0.89 1.0.114 1.0.115: Debian/Ubuntu bootstrap scripts
 dev-util/debugedit 4.14.2-r2: Stand-alone debugedit from RPM
 dev-util/dejagnu 1.6: Framework for testing other programs
 dev-util/desktop-file-utils 0.23 0.24: Command line utilities to work with desktop menu entries
-dev-util/deskzilla 1.7.1-r1: A desktop client for Mozilla's Bugzilla bug tracking system
 dev-util/devhelp 3.30.1: An API documentation browser for GNOME
 dev-util/dialog 1.3.20170131 1.3.20190808: tool to display dialog boxes from a shell
 dev-util/diffball 1.0.1: Delta compression suite for using/generating binary patches
@@ -14211,7 +14205,6 @@ media-sound/traverso 0.49.5: Professional Audio Tools for GNU/Linux
 media-sound/ttaenc 3.4.1-r1: True Audio Compressor Software
 media-sound/tudor-volumed 0_pre20110427: Lightweight, desktop environment agnostic volume management daemon
 media-sound/tunapie 2.1.17-r1 2.1.19: Directory browser for Radio and TV streams
-media-sound/tuxguitar 1.3.2: Multitrack guitar tablature editor and player written in Java-SWT
 media-sound/twolame 0.3.13-r2: An optimised MPEG Audio Layer 2 (MP2) encoder
 media-sound/umix 1.0.2-r1: Program for adjusting soundcard volumes
 media-sound/umurmur 0.2.16a-r1 0.2.17-r1 0.2.17-r2 0.2.17-r3 9999: Minimalistic Murmur (Mumble server)
@@ -15446,7 +15439,6 @@ net-misc/ipv6calc 1.0.0 2.1.0: IPv6 address calculator
 net-misc/ipx-utils 1.1-r4: The IPX Utilities
 net-misc/irrtree 1.2.1: The BGP swiss army knife of networking
 net-misc/istioctl 1.1.8 1.1.12: Istio configuration command line utility
-net-misc/java-wakeonlan 1.0.0-r2: A wakeonlan commandline tool and Java library
 net-misc/jlj 2.12-r1: Simple console LiveJournal entry system
 net-misc/jrdesktop 0.3.1.0: Java Remote Desktop (jrdesktop) software for viewing and/or controlling a distance PC
 net-misc/jwhois 4.0-r1: Advanced Internet Whois client capable of recursive queries
@@ -16179,7 +16171,6 @@ sci-biology/gibbs 3.1: Identify motifs, conserved regions, in DNA or protein seq
 sci-biology/glimmer 3.02-r3 3.02b: An HMM-based microbial gene finding system from TIGR
 sci-biology/glimmerhmm 3.0.1-r1: A eukaryotic gene finding system from TIGR
 sci-biology/gmap 2015.12.31.5: A Genomic Mapping and Alignment Program for mRNA and EST Sequences
-sci-biology/goby 1.9.7.3-r1 1.9.8.1-r1: A DNA sequencing data management framework
 sci-biology/goby-cpp 1.9.7.3 1.9.8.1 2.0.1: A DNA sequencing data management framework - C/C++ API
 sci-biology/hmmer 2.3.2-r4 3.1_beta2: Sequence analysis using profile hidden Markov models
 sci-biology/iedera 1.05-r1: A subset seed design tool for DNA sequence alignment
@@ -16307,7 +16298,6 @@ sci-chemistry/gmxapi 0.0.7.1: Gromacs API bindings
 sci-chemistry/gperiodic 2.0.10-r2 3.0.1: Periodic table application for Linux
 sci-chemistry/gromacs 2018.3 2018.7 2018.9999 2019.2 2019.3 2019.9999 9999: The ultimate molecular dynamics simulation package
 sci-chemistry/hollow 1.2-r1: Production of surface images of proteins
-sci-chemistry/jmol 12.0.45-r1 12.2.27-r1: Java molecular viever for 3-D chemical structures
 sci-chemistry/ksdssp 040728 040728-r1: An open source implementation of sci-chemistry/dssp
 sci-chemistry/mars 1.2: Robust automatic backbone assignment of proteins
 sci-chemistry/mdtraj 1.9.1: Read, write and analyze MD trajectories with only a few lines of Python code
@@ -16768,12 +16758,10 @@ sci-mathematics/bertini 1.4: Software for Numerical Algebraic Geometry
 sci-mathematics/calc 2.12.4.13-r1 2.12.5.4: Arbitrary precision C-like arithmetic system
 sci-mathematics/cgal 4.11.3: C++ library for geometric algorithms and data structures
 sci-mathematics/coq 8.6 8.6.1: Proof assistant written in O'Caml
-sci-mathematics/cvc3 2.4.1-r1: CVC3 is a theorem prover for Satisfiability Modulo Theories (SMT) problems
 sci-mathematics/cvc4 1.6 1.7: automatic theorem prover for satisfiability modulo theories (SMT) problems
 sci-mathematics/dataplot 20090821 20131220: Program for scientific visualization and statistical analyis
 sci-mathematics/diagrtb 2.64: Calculation of some eigenvectors of a large real, symmetrical, matrix
 sci-mathematics/dunshire 0.1.1: Python library to solve linear games over symmetric cones
-sci-mathematics/e 1.8-r1 2.3: E is a theorem prover for full first-order logic with equality
 sci-mathematics/ent 101202: Pseudorandom number sequence test
 sci-mathematics/euler 1.61.0: Mathematical programming environment
 sci-mathematics/factmsieve 76-r1: Convenient factorization helper script using msieve and ggnfs
@@ -16794,10 +16782,8 @@ sci-mathematics/gmm 5.1: Generic C++ template library for sparse, dense and skyl
 sci-mathematics/gmp-ecm 6.4.3-r5 6.4.4-r1 7.0.4 9999: Elliptic Curve Method for Integer Factorization
 sci-mathematics/gretl 1.9.14 1.9.90: Regression, econometrics and time-series library
 sci-mathematics/gsl-shell 2.3.0_beta1: Lua interactive shell for sci-libs/gsl
-sci-mathematics/isabelle 2016.1: Isabelle is a generic proof assistant
 sci-mathematics/jags 3.4.0 4.0.0 4.1.0 4.2.0: Just Another Gibbs Sampler for Bayesian MCMC simulation
 sci-mathematics/kodkod 1.5.2-r1: a constraint solver for relational logic
-sci-mathematics/kodkodi 1.5.2-r1: A text front-end for the Kodkod Java library
 sci-mathematics/lpsolve 5.5.2.0: Mixed Integer Linear Programming (MILP) solver
 sci-mathematics/lybniz 1.3.2-r1: A function plotter program written in PyGTK
 sci-mathematics/mathmod 4.1-r1: Plot parametric and implicit surfaces
@@ -16834,7 +16820,6 @@ sci-mathematics/sha1-polyml 5.5.0 5.6_p1: implementation of SHA1 is taken from t
 sci-mathematics/singular 3.1.6 4.0.2 4.0.3: Computer algebra system for polynomial computations
 sci-mathematics/slepc 3.11.1: Scalable Library for Eigenvalue Problem Computations
 sci-mathematics/snns 4.3-r2 4.3-r3: Stuttgart Neural Network Simulator
-sci-mathematics/spass 3.9: An Automated Theorem Prover for First-Order Logic with Equality
 sci-mathematics/spin 6.4.5: Tool for formal verification of distributed software systems
 sci-mathematics/topcom 0.17.7: Computing Triangulations Of Point Configurations and Oriented Matroids
 sci-mathematics/twelf 1.7.1 1.7.1-r1: Implementation of the logical framework LF
@@ -17347,7 +17332,6 @@ sys-apps/lm-sensors 3.5.0 3.5.0_p20190505: Hardware Monitoring user-space utilit
 sys-apps/lmctfy 0.2.0 0.3.0 0.3.1 0.5.0 0.5.0-r1: Linux application container management from Google
 sys-apps/lnxhc 1.2-r1: Linux Health Checker
 sys-apps/logwatch 7.5.1 7.5.2 9999: Analyzes and Reports on system logs
-sys-apps/lomoco 1.0-r9: Lomoco can configure vendor-specific options on Logitech USB mice
 sys-apps/lsadb 0.1.3 0.1.3-r1: Prints out information on all devices attached to the ADB bus
 sys-apps/lsb-release 1.4 1.4-r1 1.4-r2 1.4-r3: LSB version query program
 sys-apps/lsd 0.14.0 0.15.1 0.16.0: A modern ls with a lot of pretty colors and awesome icons
diff --git a/metadata/timestamp.chk b/metadata/timestamp.chk
index 345ec1922a58..761b3b092763 100644
--- a/metadata/timestamp.chk
+++ b/metadata/timestamp.chk
@@ -1 +1 @@
-Sat, 14 Sep 2019 15:46:01 +0000
+Sat, 14 Sep 2019 16:25:50 +0000