sci-chemistry/viewmol: Port to python-single-r1

Package-Manager: Portage-2.3.3, Repoman-2.3.1

3 files changed, 97 insertions, 7 deletions

diff --git a/sci-chemistry/viewmol/files/2.4.1-change-default-paths.patch b/sci-chemistry/viewmol/files/2.4.1-change-default-paths.patch
index 16a3d7ef7e38..4b1edef7ef8b 100644
--- a/sci-chemistry/viewmol/files/2.4.1-change-default-paths.patch
+++ b/sci-chemistry/viewmol/files/2.4.1-change-default-paths.patch
@@ -1,7 +1,7 @@
 diff --git a/source/getrc.c b/source/getrc.c
 index a39b436..c130096 100644
---- a/source/getrc.c
-+++ b/source/getrc.c
+--- a/getrc.c
++++ b/getrc.c
 @@ -87,7 +87,7 @@ extern XtAppContext app;
  
  static char viewmolpath[MAXLENLINE];
@@ -13,8 +13,8 @@ index a39b436..c130096 100644
  {
 diff --git a/source/install b/source/install
 index 580865b..f136af3 100755
---- a/source/install
-+++ b/source/install
+--- a/install
++++ b/install
 @@ -54,24 +54,27 @@ fi
  cp $dirorig/viewmol $ROOT/bin
  chmod 711 $ROOT/bin/viewmol
diff --git a/sci-chemistry/viewmol/files/2.4.1-remove-icc-check.patch b/sci-chemistry/viewmol/files/2.4.1-remove-icc-check.patch
index c328e9cc79ab..fd91e0a5a434 100644
--- a/sci-chemistry/viewmol/files/2.4.1-remove-icc-check.patch
+++ b/sci-chemistry/viewmol/files/2.4.1-remove-icc-check.patch
@@ -1,6 +1,5 @@
-diff -urN viewmol-2.4.1.orig/source/getmachine viewmol-2.4.1/source/getmachine
---- viewmol-2.4.1.orig/source/getmachine	2004-08-29 08:04:09.000000000 -0700
-+++ viewmol-2.4.1/source/getmachine	2005-12-02 09:30:49.000000000 -0800
+--- a/getmachine
++++ b/getmachine
 @@ -269,19 +269,11 @@
             makedir
             cat ../.config.$os > makefile
diff --git a/sci-chemistry/viewmol/viewmol-2.4.1-r3.ebuild b/sci-chemistry/viewmol/viewmol-2.4.1-r3.ebuild
new file mode 100644
index 000000000000..5673ca31a614
--- /dev/null
+++ b/sci-chemistry/viewmol/viewmol-2.4.1-r3.ebuild
@@ -0,0 +1,91 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 )
+PYTHON_REQ_USE="tk(-)"
+
+inherit prefix python-single-r1 toolchain-funcs
+
+DESCRIPTION="Open-source graphical front end for computational chemistry programs"
+HOMEPAGE="http://viewmol.sourceforge.net/"
+SRC_URI="mirror://sourceforge/viewmol/${P}.src.tgz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+
+RDEPEND="
+	media-libs/libpng:0=
+	media-libs/tiff:0
+	virtual/glu
+	virtual/opengl
+	x11-libs/libX11
+	x11-libs/libXi
+	x11-libs/libXmu
+	x11-libs/libXt
+	x11-libs/motif:0
+	${PYTHON_DEPS}"
+DEPEND="${RDEPEND}
+	x11-proto/inputproto
+	x11-proto/xproto"
+
+S="${WORKDIR}/${P}/source"
+
+PATCHES=(
+	"${FILESDIR}"/${PV}-remove-icc-check.patch
+	"${FILESDIR}"/${PV}-change-default-paths.patch
+)
+
+src_prepare() {
+	default
+
+	eprefixify getrc.c
+	sed "s:GENTOOLIBDIR:$(get_libdir):g" -i install getrc.c || die
+	sed "s:GENTOODOCDIR:${PF}:g" -i install || die
+
+	mkdir "$(uname -s)" || die
+	cd "$(uname -s)" || die
+
+	cat >> ".config.$(uname -s)" <<- EOF || die
+		LIBTIFF = -L"${EPREFIX}/usr/$(get_libdir)"
+		TIFFINCLUDE = "${EPREFIX}/usr/include"
+
+		LIBPNG = -L"${EPREFIX}/usr/$(get_libdir)"
+		PNGINCLUDE = "${EPREFIX}/usr/include"
+
+		PYTHONVERSION = ${EPYTHON}
+		PYTHONINCLUDE = $(python_get_CFLAGS)
+		PYTHONLIB = $(python_get_LIBS)
+
+		COMPILER = $(tc-getCC)
+		CFLAGS = ${CFLAGS} -DLINUX
+		LDFLAGS = ${LDFLAGS}
+		SCANDIR=
+		INCLUDE=\$(TIFFINCLUDE) -I\$(PNGINCLUDE) \$(PYTHONINCLUDE)
+		LIBRARY=\$(LIBTIFF) \$(LIBPNG) \$(PYTHONLIB)
+		LIBS=-L"${EPREFIX}/usr/$(get_libdir)" -ltiff -lpng -lz -lGLU -lGL -L"${EPREFIX}/usr/X11R6/lib" -lXm -lXmu -lXp -lXi -lXext -lXt -lX11 -lpthread -lutil -ldl -lm
+	EOF
+
+	cp .config.$(uname -s) makefile || die
+	cat ../Makefile >> makefile || die
+}
+
+src_compile() {
+	emake -C "$(uname -s)" viewmol_ tm_ bio_ readgamess_ readgauss_ readmopac_ readpdb_
+	"${EPREFIX}"/bin/bash makeTranslations || die
+}
+
+src_install() {
+	./install "${ED%/}"/usr || die
+
+	# fix broken layout
+	mv "${ED%/}"/usr/{usr/share,} || die
+	rm -rf "${ED%/}"/usr/usr || die
+	mv "${ED%/}"/usr/{$(get_libdir)/${PN}/locale,share} || die
+	mv "${ED%/}"/usr/{$(get_libdir),libexec} || die
+}