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authorRobin H. Johnson <robbat2@gentoo.org>2015-08-08 13:49:04 -0700
committerRobin H. Johnson <robbat2@gentoo.org>2015-08-08 17:38:18 -0700
commit56bd759df1d0c750a065b8c845e93d5dfa6b549d (patch)
tree3f91093cdb475e565ae857f1c5a7fd339e2d781e /sci-physics/root
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proj/gentoo: Initial commit
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed
Diffstat (limited to 'sci-physics/root')
-rw-r--r--sci-physics/root/Manifest10
-rw-r--r--sci-physics/root/files/proofd.confd12
-rw-r--r--sci-physics/root/files/proofd.initd26
-rw-r--r--sci-physics/root/files/root-5.28.00b-asneeded.patch20
-rw-r--r--sci-physics/root/files/root-5.28.00b-glibc212.patch11
-rw-r--r--sci-physics/root/files/root-5.28.00b-prop-ldflags.patch13
-rw-r--r--sci-physics/root/files/root-5.28.00b-unuran.patch39
-rw-r--r--sci-physics/root/files/root-5.32.00-afs.patch33
-rw-r--r--sci-physics/root/files/root-5.32.00-cfitsio.patch13
-rw-r--r--sci-physics/root/files/root-5.32.00-chklib64.patch24
-rw-r--r--sci-physics/root/files/root-5.32.00-dotfont.patch58
-rw-r--r--sci-physics/root/files/root-5.32.00-explicit-functions.patch18
-rw-r--r--sci-physics/root/files/root-5.32.00-htmldoc.patch12
-rw-r--r--sci-physics/root/files/root-5.32.00-nobyte-compile.patch137
-rw-r--r--sci-physics/root/files/root-5.34.05-nobyte-compile.patch137
-rw-r--r--sci-physics/root/files/root-5.34.13-desktop.patch12
-rw-r--r--sci-physics/root/files/root-5.34.13-unuran.patch40
-rw-r--r--sci-physics/root/files/root-5.34.26-ldflags.patch19
-rw-r--r--sci-physics/root/files/root-6.00.01-dotfont.patch58
-rw-r--r--sci-physics/root/files/root-6.00.01-geocad.patch15
-rw-r--r--sci-physics/root/files/root-6.00.01-llvm.patch13
-rw-r--r--sci-physics/root/files/root-6.00.01-nobyte-compile.patch33
-rw-r--r--sci-physics/root/files/root-6.00.01-prop-flags.patch17
-rw-r--r--sci-physics/root/files/root-6.02.05-xrootd4.patch11
-rw-r--r--sci-physics/root/files/rootd.confd8
-rw-r--r--sci-physics/root/files/rootd.initd28
-rw-r--r--sci-physics/root/metadata.xml35
-rw-r--r--sci-physics/root/root-5.32.03-r2.ebuild378
-rw-r--r--sci-physics/root/root-5.34.26.ebuild453
-rw-r--r--sci-physics/root/root-5.34.32.ebuild437
-rw-r--r--sci-physics/root/root-6.02.05-r2.ebuild486
31 files changed, 2606 insertions, 0 deletions
diff --git a/sci-physics/root/Manifest b/sci-physics/root/Manifest
new file mode 100644
index 000000000000..65d6949c4eac
--- /dev/null
+++ b/sci-physics/root/Manifest
@@ -0,0 +1,10 @@
+DIST ROOTUsersGuide.pdf 9124822 SHA256 70a96c4a2573dc0d320142f86993ecfda24caa755e910340a3014120f2997c8b SHA512 c3b4c18ef2e13968afdf67c6003249d4cfe6ea661fa32ce25127361bae7e3376a25cd3b11591292f3975bcd8105291aca52f2f6214c9fe45f4bd6e7e44d54b25 WHIRLPOOL 11256ba7837d17e5795cf71ac32db43d7d8f797bfbddf5f71612fe2f8fb2e01354372c0ea8f0bc22868881eb0bfdc8a3e3f1b05293d2750d293aa4d59217b2e6
+DIST RooFit_Users_Manual_2.91-33.pdf 1330062 SHA256 101c4e4c41962238fcabf1caa86cafc51241a1800594491b2e62ef8b565a5646 SHA512 732d7dea3541b51e5f0b9b5b70dae57e1bdbb2504c4222d5e5095ec0f9b67307011c1f31c2c95be419b53dd8426f52f62f6c9370084208176a2ed3d7f25d783b WHIRLPOOL 033897bef4bdb13246a81ea6749f7895e6c4d639752e932130234ad9153bb399a4e5d416237850da27f139d3cccc53d9adb7a077abf20d257ce057157d6c3696
+DIST TMVAUsersGuide-v4.03.pdf 3913533 SHA256 0cdbb4a2d19eb7a86e2911cfa73a905932e862d6c94be10b7662a9355b0241af SHA512 d8bb2ce35ef32c4877059898f56513db0b1057924e21935a3d3a6f114748e167984c43fd2ec7e54197fccff875540543968fea9a8e75bf63f5f13521724a7ddb WHIRLPOOL 0a3e2e61e8e32f3a22757178adf033f9fbb89014aecd4df7f8bd49677d772bb3ad2c0f5526259611879f6bb20df647c01e23f53ade483d7a3e2242f8aee6c6aa
+DIST info.png 2060 SHA256 51de6661250f3fb71c6c8250cbc4bdc4dc4283cc90240b4dc1ee6168e8d40279 SHA512 81a730eefbe7a7e15d5840491402c7644bf7ed5d5f8f3830ed9457b343cc7882480e993ea84aef93500742cd0fe8469859cd2c925e5582b91ef56406804ae276 WHIRLPOOL 02ea6daf9e3d21947ebf5dd01c455a13f2fcbf9981be34a150056a3510122ca49e3d137d4f242c7218d4d06ace09566d513a04f09071723ac244f5a38e982bac
+DIST root-banner.png 132555 SHA256 d165e1cc175f654ff79af39193a6144678f600e14a53dd20e2b216b3e8951e94 SHA512 139347f396e88c8062d847d612949204cb80e551a826d926950ca8ab967f0d496487fed17a227fc796ae4db23fca758d91a0af7943142adbed358e98d7667b1f WHIRLPOOL dd23e26acf9303b404cda8135d6946af3b1abba3dfdff8d80e56096f810d50a01ebfb52dc1e6ee1d1b99fbb5859dc850e0e368155339b5007294d95ce8909857
+DIST root_v5.32.03.source.tar.gz 55529362 SHA256 575057c429625df69f0fa5c303287acefff185cda8cf8d1e9a6b2d21097d5ae6 SHA512 2e067eb9c6bbda5cf4df6973a3cf5307540247fb07c349f7ee74c0cf6a4abbb63f585a9ff67139cae985250fc5c5106b5ea03d7d9d2bcd20269e0ec8760ebd02 WHIRLPOOL 87dbf6f55f82001e07afc3b467e95f841f185f1f67d1dbd953f73e8aa9127ef8485db84100d6e9a08f0ae6aa5b45a565398eb6723145fff16c07e5158bb3e3ab
+DIST root_v5.34.26.source.tar.gz 75171961 SHA256 c1fd2a249bb7210914b42e35dba4f1262cfa46b79ef7a41f73d7f08f8c54a643 SHA512 f5da5e20d1763608a32d78c48581e574a3f51aef47ecf6987a4064d1fb3234dfc9f626e041a17213f881f52f807ed6a6da60bf1d24951fa7dc2cadd94f8dd8b4 WHIRLPOOL 77b48b815c971642da68b71732a0ea3372648634281be634037b13cb58488f7075ec8bfc9a684e55d85cd9b038f229be29b19a15dfc829f0ce63a5f17241c23c
+DIST root_v5.34.32.source.tar.gz 75170203 SHA256 939c7592802a54b6cbc593efb6e51699bf52e92baf6d6b20f486aaa08480fc5f SHA512 6485f2bb544947173e1feb2cfb41d6a176020027f1193d9388700a797ba4badbf497022e6129fdc4879e709460bf1efabf3e51c51840f0c781fa12e631419afc WHIRLPOOL 695147a519415b99e73fdad1cd61bb1944e292628236b5a7cbf1835174c950fa9cb068431a8164f24663323163012ea652db84d082f9f1eb1fcae79489575d9e
+DIST root_v6.02.05.source.tar.gz 99121880 SHA256 7a5d4af171ba3b8a736c462b2041f8f35bd4c1d3b6a22c32a3ebd3ffe144ae60 SHA512 b30bc4aafe294ee069ee4c884ff70c983539a48eda586cd1938d00d4688f10e94a435640965b89c6d100fdd998453a4c1ae2109d5f1427f23865a868c561d684 WHIRLPOOL de363835fa00ffa0ff6e596b3c92b59ed59378bac3a344c066f7603d6104058203f76181d4c15478fd9066aedbe6a514257d5796feedb2d5d0d789b263e92955
+DIST rootdrawing-logo.png 15051 SHA256 1dfd913cad53a3ebd6bf560d14df918cab5a295cc7d155944a8e27284af83a6b SHA512 14aa13ebfed3c9412d7d7d04c250740b25fe3af6bcb07e618045a5cec2dc23698a251fd7df2db1a6c37331084db99b029b387ea81c25ac825fc7ae10ad164a68 WHIRLPOOL 877a959a5aead73ba69dbb805c9869cbd6a047ea476bd4e7fef80781563a61d20dad49dd4d8b0005bfc58e8f7c7d38efbb3e085a95974feb81dfc9e339c18741
diff --git a/sci-physics/root/files/proofd.confd b/sci-physics/root/files/proofd.confd
new file mode 100644
index 000000000000..81720a7eb335
--- /dev/null
+++ b/sci-physics/root/files/proofd.confd
@@ -0,0 +1,12 @@
+# conf.d file for proof daemon
+#
+# Please refer to the proofd(1) man(1) page for more information on
+# command line parameters.
+#
+PROOFD_OPTS=
+
+# Specify your base of your PROOF directory here. If left blank, it
+# will use the system default (e.g., /usr/share/root/proof).
+# Note, however, that ROOT recommends that this directory is shared (via
+# NFS or similar) among all the nodes of the cluster.
+PROOF_DIR=
diff --git a/sci-physics/root/files/proofd.initd b/sci-physics/root/files/proofd.initd
new file mode 100644
index 000000000000..aee1b029b95e
--- /dev/null
+++ b/sci-physics/root/files/proofd.initd
@@ -0,0 +1,26 @@
+#!/sbin/runscript
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+depend() {
+ need root-file-server
+ use logger
+}
+
+start() {
+ ebegin "Starting parallel ROOT facility server"
+ start-stop-daemon --start --quiet \
+ --pidfile /var/run/proofd.pid \
+ --exec /usr/bin/proofd -- ${PROOFD_OPTS} ${PROOF_DIR}
+ pidof /usr/bin/proofd > /var/run/proofd.pid
+ eend $?
+}
+
+stop() {
+ ebegin "Stopping parallel ROOT facility server"
+ start-stop-daemon --stop --quiet \
+ --pidfile /var/run/proofd.pid \
+ --exec /usr/bin/proofd
+ eend $?
+}
diff --git a/sci-physics/root/files/root-5.28.00b-asneeded.patch b/sci-physics/root/files/root-5.28.00b-asneeded.patch
new file mode 100644
index 000000000000..b845247e11c0
--- /dev/null
+++ b/sci-physics/root/files/root-5.28.00b-asneeded.patch
@@ -0,0 +1,20 @@
+--- root.orig/configure 2010-12-20 07:17:54.000000000 +0000
++++ root/configure 2010-12-20 07:16:05.000000000 +0000
+@@ -709,7 +709,7 @@
+ cat <<EOF > conftest.mk
+ include ${ac_srcdir}/config/Makefile.${arch}
+ conftest: conftest.c
+- \$(CC) \$(CFLAGS) \$(LDFLAGS) $linkdir $linklib \$< -o \$@
++ \$(CC) \$(CFLAGS) \$(LDFLAGS) \$< $linkdir $linklib -o \$@
+
+ conftest.c:
+ echo "int main() { return 0; }" > \$@
+@@ -723,7 +723,7 @@
+ cat <<EOF > conftest.mk
+ include ${ac_srcdir}/config/Makefile.${arch}
+ conftest:conftest.c
+- \$(CC) \$(CFLAGS) \$(LDFLAGS) $linkdir $linklib \$< -o \$@
++ \$(CC) \$(CFLAGS) \$(LDFLAGS) \$< $linkdir $linklib -o \$@
+
+ conftest.c:
+ echo "extern int $linksymbol (); " > \$@
diff --git a/sci-physics/root/files/root-5.28.00b-glibc212.patch b/sci-physics/root/files/root-5.28.00b-glibc212.patch
new file mode 100644
index 000000000000..a365431396f5
--- /dev/null
+++ b/sci-physics/root/files/root-5.28.00b-glibc212.patch
@@ -0,0 +1,11 @@
+--- root.orig/net/auth/src/TAFS.cxx 2010-09-14 03:22:22.647915854 +0400
++++ root/net/auth/src/TAFS.cxx 2010-09-14 03:22:39.034599899 +0400
+@@ -11,6 +11,7 @@
+
+ #ifndef WIN32
+ # include <unistd.h>
++# include <sys/stat.h>
+ #else
+ # define ssize_t int
+ # include <io.h>
+
diff --git a/sci-physics/root/files/root-5.28.00b-prop-ldflags.patch b/sci-physics/root/files/root-5.28.00b-prop-ldflags.patch
new file mode 100644
index 000000000000..732431943a88
--- /dev/null
+++ b/sci-physics/root/files/root-5.28.00b-prop-ldflags.patch
@@ -0,0 +1,13 @@
+diff -Naur root.orig/config/Makefile.in root/config/Makefile.in
+--- root.orig/config/Makefile.in 2010-12-14 17:20:26.000000000 +0300
++++ root/config/Makefile.in 2010-12-17 22:33:34.902161458 +0300
+@@ -27,7 +27,7 @@
+
+ EXTRA_CFLAGS := -Iinclude @cflags@
+ EXTRA_CXXFLAGS := -Iinclude @cflags@
+-EXTRA_LDFLAGS := @ldflags@
++EXTRA_LDFLAGS := @ldflags@ $(LDFLAGS)
+ WINRTDEBUG := @winrtdebug@
+
+ GLBPATCHFLAGS := @glbpatchcflags@
+
diff --git a/sci-physics/root/files/root-5.28.00b-unuran.patch b/sci-physics/root/files/root-5.28.00b-unuran.patch
new file mode 100644
index 000000000000..76422daed54b
--- /dev/null
+++ b/sci-physics/root/files/root-5.28.00b-unuran.patch
@@ -0,0 +1,39 @@
+diff -ur root-trunk.orig/math/unuran/Module.mk root-trunk/math/unuran/Module.mk
+--- root.orig/math/unuran/Module.mk 2010-11-25 20:41:32.000000000 +0100
++++ root/math/unuran/Module.mk 2010-11-25 20:51:47.190704977 +0100
+@@ -20,7 +20,7 @@
+ UNURANETAG := $(call stripsrc,$(UNURANDIRS)/headers.d)
+ UNRCFG := $(call stripsrc,$(UNURANDIRS)/$(UNRVERS)/config.h)
+
+-UNRTARCONTENT:=$(subst $(UNRVERS),$(UNRDIRS),$(shell mkdir -p $(UNRDIR); cd $(UNRDIR); gunzip -c $(UNRSRCS) | tar tf -))
++UNRTARCONTENT:=
+ UNRS := $(filter %.c, \
+ $(filter $(UNRDIRS)/src/utils/%,$(UNRTARCONTENT)) \
+ $(filter $(UNRDIRS)/src/methods/%,$(UNRTARCONTENT)) \
+@@ -69,10 +69,9 @@
+ ##### local rules #####
+ .PHONY: all-$(MODNAME) clean-$(MODNAME) distclean-$(MODNAME)
+
+-include/%.h: $(UNURANDIRI)/%.h $(UNURANETAG)
++include/%.h: $(UNURANDIRI)/%.h
+ cp $< $@
+
+-$(UNURANDEP): $(UNRCFG)
+ $(UNRS): $(UNURANETAG)
+
+ $(UNURANETAG): $(UNRSRCS)
+@@ -125,12 +124,12 @@
+ GNUMAKE=$(MAKE) ./configure CC="$$ACC" \
+ CFLAGS="$$ACFLAGS");
+
+-$(UNURANLIB): $(UNRCFG) $(UNRO) $(UNURANO) $(UNURANDO) $(ORDER_) \
++$(UNURANLIB): $(UNURANO) $(UNURANDO) $(ORDER_) \
+ $(MAINLIBS) $(UNURANLIBDEP)
+ @$(MAKELIB) $(PLATFORM) $(LD) "$(LDFLAGS)" \
+ "$(SOFLAGS)" libUnuran.$(SOEXT) $@ \
+ "$(UNURANO) $(UNURANDO)" \
+- "$(UNURANLIBEXTRA) $(UNRO)"
++ "$(UNURANLIBEXTRA) -lunuran"
+
+ $(UNURANDS): $(UNRINIT) $(UNURANDH1) $(UNURANL) $(ROOTCINTTMPDEP)
+ $(MAKEDIR)
diff --git a/sci-physics/root/files/root-5.32.00-afs.patch b/sci-physics/root/files/root-5.32.00-afs.patch
new file mode 100644
index 000000000000..2bf31798e6e0
--- /dev/null
+++ b/sci-physics/root/files/root-5.32.00-afs.patch
@@ -0,0 +1,33 @@
+--- root/net/auth/src/TAFS.cxx.orig 2011-12-04 00:56:29.405007770 +0400
++++ root/net/auth/src/TAFS.cxx 2011-12-04 00:56:35.534709259 +0400
+@@ -138,7 +138,7 @@
+ } else {
+ if (isatty(0) != 0 && isatty(1) != 0) {
+ Gl_config("noecho", 1);
+- pw = Getline((char *) prompt.Data());
++ pw = const_cast<char *>( Getline((char *) prompt.Data()) );
+ Gl_config("noecho", 0);
+ } else {
+ Warning("TAFS", "not tty: cannot prompt for passwd: failure");
+--- root/core/clib/src/strlcat.c.orig 2011-12-04 01:49:26.495179487 +0400
++++ root/core/clib/src/strlcat.c 2011-12-04 01:50:41.407524763 +0400
+@@ -38,7 +38,7 @@
+ * Returns strlen(src) + MIN(siz, strlen(initial dst)).
+ * If retval >= siz, truncation occurred.
+ */
+-size_t
++size_t __attribute__((weak))
+ strlcat(char *dst, const char *src, size_t siz)
+ {
+ register char *d = dst;
+--- root/core/clib/src/strlcpy.c.orig 2011-12-04 01:49:34.329797251 +0400
++++ root/core/clib/src/strlcpy.c 2011-12-04 01:50:49.051151843 +0400
+@@ -36,7 +36,7 @@
+ * will be copied. Always NUL terminates (unless siz == 0).
+ * Returns strlen(src); if retval >= siz, truncation occurred.
+ */
+-size_t
++size_t __attribute__((weak))
+ strlcpy(char *dst, const char *src, size_t siz)
+ {
+ register char *d = dst;
diff --git a/sci-physics/root/files/root-5.32.00-cfitsio.patch b/sci-physics/root/files/root-5.32.00-cfitsio.patch
new file mode 100644
index 000000000000..853c3f39f207
--- /dev/null
+++ b/sci-physics/root/files/root-5.32.00-cfitsio.patch
@@ -0,0 +1,13 @@
+--- configure.orig 2012-01-19 23:44:44.127607638 +0100
++++ configure 2012-01-20 00:19:20.420652913 +0100
+@@ -3435,9 +3435,7 @@
+ cfitsioinc=$found_hdr
+ cfitsioincdir=$found_dir
+
+- # At this time, libcfitsio.a should always be prefered over .so,
+- # to avoid forcing users to install cfitsio.
+- check_library "libcfitsio cfitsio" "no" "$cfitsiolibdir" \
++ check_library "libcfitsio cfitsio" "yes" "$cfitsiolibdir" \
+ $CFITSIO ${CFITSIO:+$CFITSIO/lib} ${CFITSIO:+$CFITSIO/.libs} \
+ ${finkdir:+$finkdir/lib} \
+ /usr/local/lib /usr/lib /opt/cfitsio/lib
diff --git a/sci-physics/root/files/root-5.32.00-chklib64.patch b/sci-physics/root/files/root-5.32.00-chklib64.patch
new file mode 100644
index 000000000000..979220f02f35
--- /dev/null
+++ b/sci-physics/root/files/root-5.32.00-chklib64.patch
@@ -0,0 +1,24 @@
+bug fix for #406817
+--- configure.orig 2012-02-29 19:46:41.000000000 +0400
++++ configure 2012-03-22 03:28:43.458968696 +0400
+@@ -441,14 +441,13 @@
+ fi
+ else
+ if file $filearg $chklib64 | grep 'ASCII' > /dev/null 2>& 1 ; then
+- check_link $chklib64
+- ret=$link_result
+- else
+- logmsg " file $filearg $chklib64 | grep '64-bit'"
+- if file $filearg $chklib64 | grep '64-bit' > /dev/null 2>& 1 ; then
+- ret=1
+- fi
++ # get real binary .so name from .so ld script
++ chklib64=$(gawk '($1 == "GROUP") { print $3 }' $chklib64)
+ fi
++ logmsg " file $filearg $chklib64 | grep '64-bit'"
++ if file $filearg $chklib64 | grep '64-bit' > /dev/null 2>& 1 ; then
++ ret=1
++ fi
+ fi
+ logmsg " result: $ret"
+ if test $ret -eq 1 ; then
diff --git a/sci-physics/root/files/root-5.32.00-dotfont.patch b/sci-physics/root/files/root-5.32.00-dotfont.patch
new file mode 100644
index 000000000000..85d6dea7655e
--- /dev/null
+++ b/sci-physics/root/files/root-5.32.00-dotfont.patch
@@ -0,0 +1,58 @@
+--- root/html/src/TClassDocOutput.cxx.orig 2012-05-25 16:18:10.000000000 +0400
++++ root/html/src/TClassDocOutput.cxx 2012-05-29 21:36:53.813593012 +0400
+@@ -625,7 +625,7 @@
+ << "size=\"8,10\";" << endl
+ << "ratio=auto;" << endl
+ << "margin=0;" << endl
+- << "node [shape=plaintext,fontsize=40,width=4,height=0.75];" << endl
++ << "node [shape=plaintext,fontsize=40,width=4,height=0.75,fontname=\"DejaVu Serif\"];" << endl
+ << "\"" << fCurrentClass->GetName() << "\" [shape=ellipse];" << endl;
+
+ std::stringstream ssDep;
+@@ -704,7 +704,7 @@
+ outdot << ";" << endl;
+ } else if (writeAndMoreFor) {
+ outdot << " \"...andmore" << writeAndMoreFor->GetName()
+- << "\" [label=\"...and more\",fontname=\"Times-Italic\",fillcolor=lightgrey,style=filled];" << endl;
++ << "\" [label=\"...and more\",fontname=\"DejaVu Serif Italic\",fillcolor=lightgrey,style=filled];" << endl;
+ }
+ }
+ if (!levelExists) break;
+@@ -733,7 +733,7 @@
+ << "ranksep=0.1;" << endl
+ << "nodesep=0;" << endl
+ << "margin=0;" << endl;
+- outdot << " node [style=filled,width=0.7,height=0.15,fixedsize=true,shape=plaintext,fontsize=10];" << endl;
++ outdot << " node [style=filled,width=0.7,height=0.15,fixedsize=true,shape=plaintext,fontsize=10,fontname=\"DejaVu Serif\"];" << endl;
+
+ std::stringstream ssDep;
+ const int numColumns = 3;
+@@ -939,7 +939,7 @@
+ << "ranksep=0;" << endl
+ << "nodesep=0;" << endl
+ << "size=\"8,10\";" << endl
+- << "node [fontsize=20,shape=plaintext];" << endl;
++ << "node [fontsize=20,shape=plaintext,fontname=\"DejaVu Serif\"];" << endl;
+
+ for (std::list<std::string>::iterator iFile = listFilesToParse.begin();
+ iFile != listFilesToParse.end(); ++iFile) {
+@@ -999,7 +999,8 @@
+ << "ranksep=0.7;" << endl
+ << "nodesep=0.3;" << endl
+ << "size=\"8,8\";" << endl
+- << "ratio=compress;" << endl;
++ << "ratio=compress;" << endl
++ << "node [fontname=\"DejaVu Serif\"];" << endl;
+
+ TString libs(fCurrentClass->GetSharedLibs());
+ outdot << "\"All Libraries\" [URL=\"LibraryDependencies.html\",shape=box,rank=max,fillcolor=lightgray,style=filled];" << endl;
+@@ -1109,7 +1110,8 @@
+
+ dotout << "digraph G {" << endl
+ << "ratio=auto;" << endl
+- << "rankdir=RL;" << endl;
++ << "rankdir=RL;" << endl
++ << "node [fontname=\"DejaVu Serif\"];" << endl;
+
+ // loop on all classes
+ TClassDocInfo* cdi = 0;
diff --git a/sci-physics/root/files/root-5.32.00-explicit-functions.patch b/sci-physics/root/files/root-5.32.00-explicit-functions.patch
new file mode 100644
index 000000000000..570d61e680fc
--- /dev/null
+++ b/sci-physics/root/files/root-5.32.00-explicit-functions.patch
@@ -0,0 +1,18 @@
+--- root/io/io/Module.mk.orig 2012-02-29 19:46:38.000000000 +0400
++++ root/io/io/Module.mk 2012-03-09 02:29:19.905665572 +0400
+@@ -67,15 +67,5 @@
+ distclean:: distclean-$(MODNAME)
+
+ ##### extra rules ######
+-#ifeq ($(GCC_VERS_FULL),gcc-4.4.0)
+-ifeq ($(GCC_VERS),gcc-4.4)
+-ifneq ($(filter -O%,$(OPT)),)
+ $(call stripsrc,$(IODIRS)/TStreamerInfoReadBuffer.o): CXXFLAGS += -DR__EXPLICIT_FUNCTION_INSTANTIATION
+-endif
+-endif
+-ifeq ($(GCC_VERS),gcc-4.5)
+-ifneq ($(filter -O%,$(OPT)),)
+ $(call stripsrc,$(IODIRS)/TStreamerInfoReadBuffer.o): CXXFLAGS += -DR__EXPLICIT_FUNCTION_INSTANTIATION
+-endif
+-endif
+-
diff --git a/sci-physics/root/files/root-5.32.00-htmldoc.patch b/sci-physics/root/files/root-5.32.00-htmldoc.patch
new file mode 100644
index 000000000000..3b80b39cda49
--- /dev/null
+++ b/sci-physics/root/files/root-5.32.00-htmldoc.patch
@@ -0,0 +1,12 @@
+--- root/html/src/THtml.cxx.orig 2012-05-25 16:18:10.000000000 +0400
++++ root/html/src/THtml.cxx 2012-05-29 19:22:40.810563296 +0400
+@@ -1913,6 +1913,9 @@
+ void THtml::CreateStyleSheet() const {
+ // Write the default ROOT style sheet.
+ CopyFileFromEtcDir("ROOT.css");
++ CopyFileFromEtcDir("info.png");
++ CopyFileFromEtcDir("root-banner.png");
++ CopyFileFromEtcDir("rootdrawing-logo.png");
+ CopyFileFromEtcDir("shadowAlpha.png");
+ CopyFileFromEtcDir("shadow.gif");
+ }
diff --git a/sci-physics/root/files/root-5.32.00-nobyte-compile.patch b/sci-physics/root/files/root-5.32.00-nobyte-compile.patch
new file mode 100644
index 000000000000..179e5790cc36
--- /dev/null
+++ b/sci-physics/root/files/root-5.32.00-nobyte-compile.patch
@@ -0,0 +1,137 @@
+diff -Naur root.as-needed/Makefile root/Makefile
+--- root.as-needed/Makefile 2011-07-10 10:42:49.758191296 +0400
++++ root/Makefile 2011-07-10 10:43:21.493339703 +0400
+@@ -1167,10 +1167,7 @@
+ if test "x$(RFLX_GRFLXPY)" != "x"; then \
+ rm -f $(DESTDIR)$(LIBDIR)/$(RFLX_GRFLXPY); \
+ fi; \
+- if test "x$(RFLX_GRFLXPYC)" != "x"; then \
+- rm -f $(DESTDIR)$(LIBDIR)/$(RFLX_GRFLXPYC); \
+- fi; \
+- if test "x$(RFLX_GRFLXPY)$(RFLX_GRFLXPYC)" != "x"; then \
++ if test "x$(RFLX_GRFLXPY)" != "x"; then \
+ dir=$(RFLX_GRFLXDD:lib/=); \
+ while test "x$${dir}" != "x" && \
+ test -d $(DESTDIR)$(LIBDIR)/$${dir} && \
+diff -Naur root.as-needed/bindings/pyroot/Module.mk root/bindings/pyroot/Module.mk
+--- root.as-needed/bindings/pyroot/Module.mk 2011-07-10 10:42:48.991561304 +0400
++++ root/bindings/pyroot/Module.mk 2011-07-10 10:43:21.493339703 +0400
+@@ -48,8 +48,6 @@
+ ROOTPY := $(subst $(MODDIR),$(LPATH),$(ROOTPYS))
+ $(LPATH)/%.py: $(MODDIR)/%.py; cp $< $@
+ endif
+-ROOTPYC := $(ROOTPY:.py=.pyc)
+-ROOTPYO := $(ROOTPY:.py=.pyo)
+
+ # used in the main Makefile
+ ALLHDRS += $(patsubst $(MODDIRI)/%.h,include/%.h,$(PYROOTH))
+@@ -68,10 +66,8 @@
+ include/%.h: $(PYROOTDIRI)/%.h
+ cp $< $@
+
+-%.pyc: %.py; python -c 'import py_compile; py_compile.compile( "$<" )'
+-%.pyo: %.py; python -O -c 'import py_compile; py_compile.compile( "$<" )'
+
+-$(PYROOTLIB): $(PYROOTO) $(PYROOTDO) $(ROOTPY) $(ROOTPYC) $(ROOTPYO) \
++$(PYROOTLIB): $(PYROOTO) $(PYROOTDO) $(ROOTPY) \
+ $(ROOTLIBSDEP) $(PYTHONLIBDEP)
+ @$(MAKELIB) $(PLATFORM) $(LD) "$(LDFLAGS)" \
+ "$(SOFLAGS)" libPyROOT.$(SOEXT) $@ \
+@@ -113,7 +109,7 @@
+
+ distclean-$(MODNAME): clean-$(MODNAME)
+ @rm -f $(PYROOTDEP) $(PYROOTDS) $(PYROOTDH) $(PYROOTLIB) \
+- $(ROOTPY) $(ROOTPYC) $(ROOTPYO) $(PYROOTMAP) \
++ $(ROOTPY) $(PYROOTMAP) \
+ $(PYROOTPYD) $(PYTHON64DEP) $(PYTHON64)
+
+ distclean:: distclean-$(MODNAME)
+diff -Naur root.as-needed/build/package/debian/rules root/build/package/debian/rules
+--- root.as-needed/build/package/debian/rules 2011-07-10 10:42:49.241549346 +0400
++++ root/build/package/debian/rules 2011-07-10 10:48:06.989670589 +0400
+@@ -691,10 +691,6 @@
+ -X$(SYSCONFDIR)/root/system.rootauthrc \
+ -X$(SYSCONFDIR)/root/system.rootdaemonrc \
+ -X$(PREFIX)/lib/root/$(SOVERS)/libAfterImage.a \
+- -X$(PREFIX)/lib/root/$(SOVERS)/PyCintex.pyc \
+- -X$(PREFIX)/lib/root/$(SOVERS)/PyCintex.pyo \
+- -X$(PREFIX)/lib/root/$(SOVERS)/ROOT.pyc \
+- -X$(PREFIX)/lib/root/$(SOVERS)/ROOT.pyo \
+ -X$(PREFIX)/lib/root/$(SOVERS)/cint7 \
+ -X$(PREFIX)/include/root/Minuit2
+ # $(foreach i, \
+diff -Naur root.as-needed/cint/cintex/Module.mk root/cint/cintex/Module.mk
+--- root.as-needed/cint/cintex/Module.mk 2011-07-10 10:42:49.104889217 +0400
++++ root/cint/cintex/Module.mk 2011-07-10 10:43:21.496672876 +0400
+@@ -31,10 +31,6 @@
+ CINTEXPY := $(subst $(MODDIR)/python,$(LPATH),$(CINTEXPYS))
+ $(LPATH)/%.py: $(MODDIR)/python/%.py; cp $< $@
+ endif
+-ifneq ($(BUILDPYTHON),no)
+-CINTEXPYC := $(CINTEXPY:.py=.pyc)
+-CINTEXPYO := $(CINTEXPY:.py=.pyo)
+-endif
+
+ # used in the main Makefile
+ ALLHDRS += $(patsubst $(MODDIRI)/Cintex/%.h,include/Cintex/%.h,$(CINTEXH))
+@@ -86,8 +82,6 @@
+ fi)
+ cp $< $@
+
+-%.pyc: %.py; python -c 'import py_compile; py_compile.compile( "$<" )'
+-%.pyo: %.py; python -O -c 'import py_compile; py_compile.compile( "$<" )'
+
+ $(CINTEXLIB): $(CINTEXO) $(CINTEXPY) $(CINTEXPYC) $(CINTEXPYO) \
+ $(ORDER_) $(subst $(CINTEXLIB),,$(MAINLIBS)) $(CINTEXLIBDEP)
+diff -Naur root.as-needed/cint/reflex/Module.mk root/cint/reflex/Module.mk
+--- root.as-needed/cint/reflex/Module.mk 2011-07-10 10:42:49.074890651 +0400
++++ root/cint/reflex/Module.mk 2011-07-10 10:43:21.496672876 +0400
+@@ -48,9 +48,6 @@
+ RFLX_GRFLXS := $(wildcard $(RFLX_GRFLXSD)/*.py)
+ RFLX_GRFLXPY := $(patsubst $(RFLX_GRFLXSD)/%.py,$(RFLX_GRFLXDD)/%.py,$(RFLX_GRFLXS))
+ RFLX_GRFLXPY += $(RFLX_GCCXMLPATHPY)
+-ifneq ($(BUILDPYTHON),no)
+-RFLX_GRFLXPYC := $(subst .py,.pyc,$(RFLX_GRFLXPY))
+-endif
+
+ RFLX_LIBDIR = $(LIBDIR)
+
+@@ -92,7 +89,7 @@
+
+ ALLEXECS += $(RFLX_GENMAPX)
+
+-POSTBIN += $(RFLX_GRFLXPYC) $(RFLX_GRFLXPY)
++POSTBIN += $(RFLX_GRFLXPY)
+
+ ##### local rules #####
+ .PHONY: all-$(MODNAME) clean-$(MODNAME) distclean-$(MODNAME) \
+@@ -122,8 +119,6 @@
+ mkdir -p lib/python/genreflex; fi )
+ cp $< $@
+
+-$(RFLX_GRFLXDD)/%.pyc: $(RFLX_GRFLXDD)/%.py
+- @python -c 'import py_compile; py_compile.compile( "$<" )'
+
+ $(RFLX_GENMAPO) : CXXFLAGS += -I$(REFLEXDIRS)/genmap
+
+@@ -149,7 +144,7 @@
+ $(RLIBMAP) -o $@ -l $(REFLEXDICTLIB) \
+ -d $(REFLEXDICTLIBDEPM) -c $(REFLEXL)
+
+-all-$(MODNAME): $(REFLEXLIB) $(REFLEXDICTLIB) $(REFLEXDICTMAP) $(RFLX_GRFLXPYC) $(RFLX_GRFLXPY)
++all-$(MODNAME): $(REFLEXLIB) $(REFLEXDICTLIB) $(REFLEXDICTMAP) $(RFLX_GRFLXPY)
+
+ clean-genreflex:
+ @rm -rf lib/python/genreflex
+diff -Naur root.as-needed/cint/reflex/python/CMakeLists.txt root/cint/reflex/python/CMakeLists.txt
+--- root.as-needed/cint/reflex/python/CMakeLists.txt 2011-07-10 10:42:49.074890651 +0400
++++ root/cint/reflex/python/CMakeLists.txt 2011-07-10 10:43:21.496672876 +0400
+@@ -15,7 +15,7 @@
+ ##################### sources ####################
+
+ FILE(GLOB_RECURSE GENREFLEX_SRCS RELATIVE ${CMAKE_CURRENT_SOURCE_DIR} genreflex/*.py)
+-SET(GENREFLEX_SCRIPT ${CMAKE_CURRENT_BINARY_DIR}/genreflex/genreflex.pyc PARENT_SCOPE)
++SET(GENREFLEX_SCRIPT PARENT_SCOPE)
+
+ ##################### gccxmlpath ####################
+
diff --git a/sci-physics/root/files/root-5.34.05-nobyte-compile.patch b/sci-physics/root/files/root-5.34.05-nobyte-compile.patch
new file mode 100644
index 000000000000..ec67a15887f6
--- /dev/null
+++ b/sci-physics/root/files/root-5.34.05-nobyte-compile.patch
@@ -0,0 +1,137 @@
+diff -Naur root.as-needed/Makefile root/Makefile
+--- a/Makefile.orig 2013-02-15 02:27:56.000000000 +0400
++++ b/Makefile 2013-02-23 02:22:14.556465852 +0400
+@@ -1258,10 +1258,7 @@
+ for lib in $(RFLX_GRFLXPY); do \
+ rm -f $(DESTDIR)$(LIBDIR)/$${lib#lib/}; \
+ done; \
+- for lib in $(RFLX_GRFLXPYC); do \
+- rm -f $(DESTDIR)$(LIBDIR)/$${lib#lib/}; \
+- done; \
+- if test "x$(RFLX_GRFLXPY)$(RFLX_GRFLXPYC)" != "x"; then \
++ if test "x$(RFLX_GRFLXPY)" != "x"; then \
+ dir=$(subst lib/,,$(RFLX_GRFLXDD)); \
+ while test "x$${dir}" != "x" && \
+ test -d $(DESTDIR)$(LIBDIR)/$${dir} && \
+diff -Naur root.as-needed/bindings/pyroot/Module.mk root/bindings/pyroot/Module.mk
+--- root.as-needed/bindings/pyroot/Module.mk 2011-07-10 10:42:48.991561304 +0400
++++ root/bindings/pyroot/Module.mk 2011-07-10 10:43:21.493339703 +0400
+@@ -48,8 +48,6 @@
+ ROOTPY := $(subst $(MODDIR),$(LPATH),$(ROOTPYS))
+ $(LPATH)/%.py: $(MODDIR)/%.py; cp $< $@
+ endif
+-ROOTPYC := $(ROOTPY:.py=.pyc)
+-ROOTPYO := $(ROOTPY:.py=.pyo)
+
+ # used in the main Makefile
+ ALLHDRS += $(patsubst $(MODDIRI)/%.h,include/%.h,$(PYROOTH))
+@@ -68,10 +66,8 @@
+ include/%.h: $(PYROOTDIRI)/%.h
+ cp $< $@
+
+-%.pyc: %.py; python -c 'import py_compile; py_compile.compile( "$<" )'
+-%.pyo: %.py; python -O -c 'import py_compile; py_compile.compile( "$<" )'
+
+-$(PYROOTLIB): $(PYROOTO) $(PYROOTDO) $(ROOTPY) $(ROOTPYC) $(ROOTPYO) \
++$(PYROOTLIB): $(PYROOTO) $(PYROOTDO) $(ROOTPY) \
+ $(ROOTLIBSDEP) $(PYTHONLIBDEP)
+ @$(MAKELIB) $(PLATFORM) $(LD) "$(LDFLAGS)" \
+ "$(SOFLAGS)" libPyROOT.$(SOEXT) $@ \
+@@ -113,7 +109,7 @@
+
+ distclean-$(MODNAME): clean-$(MODNAME)
+ @rm -f $(PYROOTDEP) $(PYROOTDS) $(PYROOTDH) $(PYROOTLIB) \
+- $(ROOTPY) $(ROOTPYC) $(ROOTPYO) $(PYROOTMAP) \
++ $(ROOTPY) $(PYROOTMAP) \
+ $(PYROOTPYD) $(PYTHON64DEP) $(PYTHON64)
+
+ distclean:: distclean-$(MODNAME)
+diff -Naur root.as-needed/build/package/debian/rules root/build/package/debian/rules
+--- root.as-needed/build/package/debian/rules 2011-07-10 10:42:49.241549346 +0400
++++ root/build/package/debian/rules 2011-07-10 10:48:06.989670589 +0400
+@@ -691,10 +691,6 @@
+ -X$(SYSCONFDIR)/root/system.rootauthrc \
+ -X$(SYSCONFDIR)/root/system.rootdaemonrc \
+ -X$(PREFIX)/lib/root/$(SOVERS)/libAfterImage.a \
+- -X$(PREFIX)/lib/root/$(SOVERS)/PyCintex.pyc \
+- -X$(PREFIX)/lib/root/$(SOVERS)/PyCintex.pyo \
+- -X$(PREFIX)/lib/root/$(SOVERS)/ROOT.pyc \
+- -X$(PREFIX)/lib/root/$(SOVERS)/ROOT.pyo \
+ -X$(PREFIX)/lib/root/$(SOVERS)/cint7 \
+ -X$(PREFIX)/include/root/Minuit2
+ # $(foreach i, \
+diff -Naur root.as-needed/cint/cintex/Module.mk root/cint/cintex/Module.mk
+--- root.as-needed/cint/cintex/Module.mk 2011-07-10 10:42:49.104889217 +0400
++++ root/cint/cintex/Module.mk 2011-07-10 10:43:21.496672876 +0400
+@@ -31,10 +31,6 @@
+ CINTEXPY := $(subst $(MODDIR)/python,$(LPATH),$(CINTEXPYS))
+ $(LPATH)/%.py: $(MODDIR)/python/%.py; cp $< $@
+ endif
+-ifneq ($(BUILDPYTHON),no)
+-CINTEXPYC := $(CINTEXPY:.py=.pyc)
+-CINTEXPYO := $(CINTEXPY:.py=.pyo)
+-endif
+
+ # used in the main Makefile
+ ALLHDRS += $(patsubst $(MODDIRI)/Cintex/%.h,include/Cintex/%.h,$(CINTEXH))
+@@ -86,8 +82,6 @@
+ fi)
+ cp $< $@
+
+-%.pyc: %.py; python -c 'import py_compile; py_compile.compile( "$<" )'
+-%.pyo: %.py; python -O -c 'import py_compile; py_compile.compile( "$<" )'
+
+ $(CINTEXLIB): $(CINTEXO) $(CINTEXPY) $(CINTEXPYC) $(CINTEXPYO) \
+ $(ORDER_) $(subst $(CINTEXLIB),,$(MAINLIBS)) $(CINTEXLIBDEP)
+diff -Naur root.as-needed/cint/reflex/Module.mk root/cint/reflex/Module.mk
+--- root.as-needed/cint/reflex/Module.mk 2011-07-10 10:42:49.074890651 +0400
++++ root/cint/reflex/Module.mk 2011-07-10 10:43:21.496672876 +0400
+@@ -48,9 +48,6 @@
+ RFLX_GRFLXS := $(wildcard $(RFLX_GRFLXSD)/*.py)
+ RFLX_GRFLXPY := $(patsubst $(RFLX_GRFLXSD)/%.py,$(RFLX_GRFLXDD)/%.py,$(RFLX_GRFLXS))
+ RFLX_GRFLXPY += $(RFLX_GCCXMLPATHPY)
+-ifneq ($(BUILDPYTHON),no)
+-RFLX_GRFLXPYC := $(subst .py,.pyc,$(RFLX_GRFLXPY))
+-endif
+
+ RFLX_LIBDIR = $(LIBDIR)
+
+@@ -92,7 +89,7 @@
+
+ ALLEXECS += $(RFLX_GENMAPX)
+
+-POSTBIN += $(RFLX_GRFLXPYC) $(RFLX_GRFLXPY)
++POSTBIN += $(RFLX_GRFLXPY)
+
+ ##### local rules #####
+ .PHONY: all-$(MODNAME) clean-$(MODNAME) distclean-$(MODNAME) \
+@@ -122,8 +119,6 @@
+ mkdir -p lib/python/genreflex; fi )
+ cp $< $@
+
+-$(RFLX_GRFLXDD)/%.pyc: $(RFLX_GRFLXDD)/%.py
+- @python -c 'import py_compile; py_compile.compile( "$<" )'
+
+ $(RFLX_GENMAPO) : CXXFLAGS += -I$(REFLEXDIRS)/genmap
+
+@@ -149,7 +144,7 @@
+ $(RLIBMAP) -o $@ -l $(REFLEXDICTLIB) \
+ -d $(REFLEXDICTLIBDEPM) -c $(REFLEXL)
+
+-all-$(MODNAME): $(REFLEXLIB) $(REFLEXDICTLIB) $(REFLEXDICTMAP) $(RFLX_GRFLXPYC) $(RFLX_GRFLXPY)
++all-$(MODNAME): $(REFLEXLIB) $(REFLEXDICTLIB) $(REFLEXDICTMAP) $(RFLX_GRFLXPY)
+
+ clean-genreflex:
+ @rm -rf lib/python/genreflex
+diff -Naur root.as-needed/cint/reflex/python/CMakeLists.txt root/cint/reflex/python/CMakeLists.txt
+--- root.as-needed/cint/reflex/python/CMakeLists.txt 2011-07-10 10:42:49.074890651 +0400
++++ root/cint/reflex/python/CMakeLists.txt 2011-07-10 10:43:21.496672876 +0400
+@@ -15,7 +15,7 @@
+ ##################### sources ####################
+
+ FILE(GLOB_RECURSE GENREFLEX_SRCS RELATIVE ${CMAKE_CURRENT_SOURCE_DIR} genreflex/*.py)
+-SET(GENREFLEX_SCRIPT ${CMAKE_CURRENT_BINARY_DIR}/genreflex/genreflex.pyc PARENT_SCOPE)
++SET(GENREFLEX_SCRIPT PARENT_SCOPE)
+
+ ##################### gccxmlpath ####################
+
diff --git a/sci-physics/root/files/root-5.34.13-desktop.patch b/sci-physics/root/files/root-5.34.13-desktop.patch
new file mode 100644
index 000000000000..7d47bcf7ce45
--- /dev/null
+++ b/sci-physics/root/files/root-5.34.13-desktop.patch
@@ -0,0 +1,12 @@
+diff --git a/etc/root.desktop b/etc/root.desktop
+index ca38211..688ecfa 100644
+--- a/etc/root.desktop
++++ b/etc/root.desktop
+@@ -8,5 +8,5 @@ Name[de]=ROOT
+ Comment=An object-oriented data analysis framework
+ Comment[de]=Ein objektorientiertes Framework zur Datenanalyse
+ StartupNotify=true
+-MimeType=application/x-root;text/x-c++src
+-Categories=Science;Development;Application;
++MimeType=application/x-root;text/x-c++src;
++Categories=Science;Development;
diff --git a/sci-physics/root/files/root-5.34.13-unuran.patch b/sci-physics/root/files/root-5.34.13-unuran.patch
new file mode 100644
index 000000000000..8262313184b5
--- /dev/null
+++ b/sci-physics/root/files/root-5.34.13-unuran.patch
@@ -0,0 +1,40 @@
+diff --git a/math/unuran/Module.mk b/math/unuran/Module.mk
+index 00a530b..7cd22dc 100644
+--- a/math/unuran/Module.mk
++++ b/math/unuran/Module.mk
+@@ -31,7 +31,7 @@ UNRS := $(wildcard $(UNRDIRS)/src/utils/*.c) \
+ $(wildcard $(UNRDIRS)/src/uniform/*.c) \
+ $(wildcard $(UNRDIRS)/src/urng/*.c)
+ else
+-UNRTARCONTENT:=$(subst $(UNRVERS),$(UNRDIRS),$(shell mkdir -p $(UNRDIR); cd $(UNRDIR); gunzip -c $(UNRSRCS) | tar tf -))
++UNRTARCONTENT:=
+ UNRS := $(filter %.c, \
+ $(filter $(UNRDIRS)/src/utils/%,$(UNRTARCONTENT)) \
+ $(filter $(UNRDIRS)/src/methods/%,$(UNRTARCONTENT)) \
+@@ -81,10 +81,9 @@ INCLUDEFILES += $(UNURANDEP)
+ ##### local rules #####
+ .PHONY: all-$(MODNAME) clean-$(MODNAME) distclean-$(MODNAME)
+
+-include/%.h: $(UNURANDIRI)/%.h $(UNURANETAG)
++include/%.h: $(UNURANDIRI)/%.h
+ cp $< $@
+
+-$(UNURANDEP): $(UNRCFG)
+ $(UNRS): $(UNURANETAG)
+
+ $(UNURANETAG): $(UNRSRCS)
+@@ -137,12 +136,12 @@ $(UNRCFG): $(UNURANETAG)
+ GNUMAKE=$(MAKE) ./configure CC="$$ACC" \
+ CFLAGS="$$ACFLAGS");
+
+-$(UNURANLIB): $(UNRCFG) $(UNRO) $(UNURANO) $(UNURANDO) $(ORDER_) \
++$(UNURANLIB): $(UNURANO) $(UNURANDO) $(ORDER_) \
+ $(MAINLIBS) $(UNURANLIBDEP)
+ @$(MAKELIB) $(PLATFORM) $(LD) "$(LDFLAGS)" \
+ "$(SOFLAGS)" libUnuran.$(SOEXT) $@ \
+ "$(UNURANO) $(UNURANDO)" \
+- "$(UNURANLIBEXTRA) $(UNRO)"
++ "$(UNURANLIBEXTRA) -lunuran"
+
+ $(UNURANDS): $(UNRINIT) $(UNURANDH1) $(UNURANL) $(ROOTCINTTMPDEP)
+ $(MAKEDIR)
diff --git a/sci-physics/root/files/root-5.34.26-ldflags.patch b/sci-physics/root/files/root-5.34.26-ldflags.patch
new file mode 100644
index 000000000000..b81dbb5edb00
--- /dev/null
+++ b/sci-physics/root/files/root-5.34.26-ldflags.patch
@@ -0,0 +1,19 @@
+commit 3c8bc686abf57e7e2037c4c191cb63a1a5172b5b
+Author: Andrew Savchenko <bircoph@gmail.com>
+Date: Sun Feb 22 03:45:21 2015 +0300
+
+ root-5.32.00-prop-flags.patch -> root-5.34.26-prop-flags.patch
+
+diff --git a/config/Makefile.in b/config/Makefile.in
+index 89674e7..91d25b9 100644
+--- a/config/Makefile.in
++++ b/config/Makefile.in
+@@ -29,7 +29,7 @@ EXTRA_CFLAGS := -Iinclude @cflags@
+ USERCONF_CFLAGS:= @usercflags@
+ EXTRA_CXXFLAGS := -Iinclude @cflags@
+ USERCONF_CXXFLAGS:= @usercxxflags@
+-EXTRA_LDFLAGS := @ldflags@
++EXTRA_LDFLAGS := @ldflags@ $(LDFLAGS)
+ WERROR := @werror@
+ WINRTDEBUG := @winrtdebug@
+
diff --git a/sci-physics/root/files/root-6.00.01-dotfont.patch b/sci-physics/root/files/root-6.00.01-dotfont.patch
new file mode 100644
index 000000000000..6c765f75a505
--- /dev/null
+++ b/sci-physics/root/files/root-6.00.01-dotfont.patch
@@ -0,0 +1,58 @@
+--- root/html/src/TClassDocOutput.cxx.orig 2012-06-08 02:13:51.000000000 +0400
++++ root/html/src/TClassDocOutput.cxx 2012-06-08 02:34:45.705436577 +0400
+@@ -625,7 +625,7 @@
+ << "size=\"8,10\";" << std::endl
+ << "ratio=auto;" << std::endl
+ << "margin=0;" << std::endl
+- << "node [shape=plaintext,fontsize=40,width=4,height=0.75];" << std::endl
++ << "node [shape=plaintext,fontsize=40,width=4,height=0.75,fontname=\"DejaVu Serif\"];" << std::endl
+ << "\"" << fCurrentClass->GetName() << "\" [shape=ellipse];" << std::endl;
+
+ std::stringstream ssDep;
+@@ -704,7 +704,7 @@
+ outdot << ";" << std::endl;
+ } else if (writeAndMoreFor) {
+ outdot << " \"...andmore" << writeAndMoreFor->GetName()
+- << "\" [label=\"...and more\",fontname=\"Times-Italic\",fillcolor=lightgrey,style=filled];" << std::endl;
++ << "\" [label=\"...and more\",fontname=\"DejaVu Serif Italic\",fillcolor=lightgrey,style=filled];" << std::endl;
+ }
+ }
+ if (!levelExists) break;
+@@ -733,7 +733,7 @@
+ << "ranksep=0.1;" << std::endl
+ << "nodesep=0;" << std::endl
+ << "margin=0;" << std::endl;
+- outdot << " node [style=filled,width=0.7,height=0.15,fixedsize=true,shape=plaintext,fontsize=10];" << std::endl;
++ outdot << " node [style=filled,width=0.7,height=0.15,fixedsize=true,shape=plaintext,fontsize=10,fontname=\"DejaVu Serif\"];" << std::endl;
+
+ std::stringstream ssDep;
+ const int numColumns = 3;
+@@ -939,7 +939,7 @@
+ << "ranksep=0;" << std::endl
+ << "nodesep=0;" << std::endl
+ << "size=\"8,10\";" << std::endl
+- << "node [fontsize=20,shape=plaintext];" << std::endl;
++ << "node [fontsize=20,shape=plaintext,fontname=\"DejaVu Serif\"];" << std::endl;
+
+ for (std::list<std::string>::iterator iFile = listFilesToParse.begin();
+ iFile != listFilesToParse.end(); ++iFile) {
+@@ -999,7 +999,8 @@
+ << "ranksep=0.7;" << std::endl
+ << "nodesep=0.3;" << std::endl
+ << "size=\"8,8\";" << std::endl
+- << "ratio=compress;" << std::endl;
++ << "ratio=compress;" << std::endl
++ << "node [fontname=\"DejaVu Serif\"];" << std::endl;
+
+ TString libs(fCurrentClass->GetSharedLibs());
+ outdot << "\"All Libraries\" [URL=\"LibraryDependencies.html\",shape=box,rank=max,fillcolor=lightgray,style=filled];" << std::endl;
+@@ -1109,7 +1110,8 @@
+
+ dotout << "digraph G {" << std::endl
+ << "ratio=auto;" << std::endl
+- << "rankdir=RL;" << std::endl;
++ << "rankdir=RL;" << std::endl
++ << "node [fontname=\"DejaVu Serif\"];" << std::endl;
+
+ // loop on all classes
+ TClassDocInfo* cdi = 0;
diff --git a/sci-physics/root/files/root-6.00.01-geocad.patch b/sci-physics/root/files/root-6.00.01-geocad.patch
new file mode 100644
index 000000000000..2742a74bd0eb
--- /dev/null
+++ b/sci-physics/root/files/root-6.00.01-geocad.patch
@@ -0,0 +1,15 @@
+diff --git a/geom/geocad/inc/TGeoToOCC.h b/geom/geocad/inc/TGeoToOCC.h
+index 892f225..86eb9e1 100644
+--- a/geom/geocad/inc/TGeoToOCC.h
++++ b/geom/geocad/inc/TGeoToOCC.h
+@@ -13,8 +13,10 @@
+ #define ROOT_TGeoToOCC
+
+ //Cascade
++#define Printf Printf_opencascade
+ #include <TopoDS_Shape.hxx>
+ #include <TopoDS_Wire.hxx>
++#undef Printf
+
+ //Root
+ #ifndef ROOT_TGeoXtru
diff --git a/sci-physics/root/files/root-6.00.01-llvm.patch b/sci-physics/root/files/root-6.00.01-llvm.patch
new file mode 100644
index 000000000000..c6abb353ee64
--- /dev/null
+++ b/sci-physics/root/files/root-6.00.01-llvm.patch
@@ -0,0 +1,13 @@
+diff --git a/interpreter/llvm/src/Makefile.config.in b/interpreter/llvm/src/Makefile.config.in
+index 7633be2..c8756b1 100644
+--- a/interpreter/llvm/src/Makefile.config.in
++++ b/interpreter/llvm/src/Makefile.config.in
+@@ -170,6 +170,8 @@ CXXFLAGS += @CXXFLAGS@
+
+ # Linker flags.
+ LDFLAGS += @LDFLAGS@
++NOUNDEF := -Wl,--no-undefined
++LDFLAGS := $(filter-out $(NOUNDEF),$(LDFLAGS))
+
+ # Path to the library archiver program.
+ AR_PATH = @AR@
diff --git a/sci-physics/root/files/root-6.00.01-nobyte-compile.patch b/sci-physics/root/files/root-6.00.01-nobyte-compile.patch
new file mode 100644
index 000000000000..aa58f20686dc
--- /dev/null
+++ b/sci-physics/root/files/root-6.00.01-nobyte-compile.patch
@@ -0,0 +1,33 @@
+diff -Naur root.as-needed/bindings/pyroot/Module.mk root/bindings/pyroot/Module.mk
+--- root.as-needed/bindings/pyroot/Module.mk 2011-07-10 10:42:48.991561304 +0400
++++ root/bindings/pyroot/Module.mk 2011-07-10 10:43:21.493339703 +0400
+@@ -48,8 +48,6 @@
+ ROOTPY := $(subst $(MODDIR),$(LPATH),$(ROOTPYS))
+ $(LPATH)/%.py: $(MODDIR)/%.py; cp $< $@
+ endif
+-ROOTPYC := $(ROOTPY:.py=.pyc)
+-ROOTPYO := $(ROOTPY:.py=.pyo)
+
+ # used in the main Makefile
+ ALLHDRS += $(patsubst $(MODDIRI)/%.h,include/%.h,$(PYROOTH))
+@@ -68,10 +66,8 @@
+ include/%.h: $(PYROOTDIRI)/%.h
+ cp $< $@
+
+-%.pyc: %.py; python -c 'import py_compile; py_compile.compile( "$<" )'
+-%.pyo: %.py; python -O -c 'import py_compile; py_compile.compile( "$<" )'
+
+-$(PYROOTLIB): $(PYROOTO) $(PYROOTDO) $(ROOTPY) $(ROOTPYC) $(ROOTPYO) \
++$(PYROOTLIB): $(PYROOTO) $(PYROOTDO) $(ROOTPY) \
+ $(ROOTLIBSDEP) $(PYTHONLIBDEP)
+ @$(MAKELIB) $(PLATFORM) $(LD) "$(LDFLAGS)" \
+ "$(SOFLAGS)" libPyROOT.$(SOEXT) $@ \
+@@ -113,7 +109,7 @@
+
+ distclean-$(MODNAME): clean-$(MODNAME)
+ @rm -f $(PYROOTDEP) $(PYROOTDS) $(PYROOTDH) $(PYROOTLIB) \
+- $(ROOTPY) $(ROOTPYC) $(ROOTPYO) $(PYROOTMAP) \
++ $(ROOTPY) $(PYROOTMAP) \
+ $(PYROOTPYD) $(PYTHON64DEP) $(PYTHON64)
+
+ distclean:: distclean-$(MODNAME)
diff --git a/sci-physics/root/files/root-6.00.01-prop-flags.patch b/sci-physics/root/files/root-6.00.01-prop-flags.patch
new file mode 100644
index 000000000000..3a1002478902
--- /dev/null
+++ b/sci-physics/root/files/root-6.00.01-prop-flags.patch
@@ -0,0 +1,17 @@
+diff --git a/config/Makefile.in b/config/Makefile.in
+index dd89044..4fc7de3 100644
+--- a/config/Makefile.in
++++ b/config/Makefile.in
+@@ -64,9 +64,9 @@ HOST := @host@
+ USECONFIG := @useconfig@
+ MKLIBOPTIONS := @mkliboption@
+
+-EXTRA_CFLAGS := -Iinclude @cflags@
+-EXTRA_CXXFLAGS := -Iinclude @cflags@
+-EXTRA_LDFLAGS := @ldflags@
++EXTRA_CFLAGS := -Iinclude @cflags@ $(CFLAGS)
++EXTRA_CXXFLAGS := -Iinclude @cflags@ $(CXXFLAGS)
++EXTRA_LDFLAGS := @ldflags@ $(LDFLAGS)
+ WERROR := @werror@
+ WINRTDEBUG := @winrtdebug@
+ CTORSINITARRAY := @ctorsinitarray@
diff --git a/sci-physics/root/files/root-6.02.05-xrootd4.patch b/sci-physics/root/files/root-6.02.05-xrootd4.patch
new file mode 100644
index 000000000000..0b4a4bef0f2e
--- /dev/null
+++ b/sci-physics/root/files/root-6.02.05-xrootd4.patch
@@ -0,0 +1,11 @@
+https://sft.its.cern.ch/jira/browse/ROOT-6998
+--- root-6.02.05/net/netxng/src/TNetXNGFile.cxx.orig 2015-02-09 11:59:47.000000000 +0300
++++ root-6.02.05/net/netxng/src/TNetXNGFile.cxx 2015-04-05 11:32:31.893127758 +0300
+@@ -28,6 +28,7 @@
+ #include <XrdCl/XrdClFile.hh>
+ #include <XrdCl/XrdClXRootDResponses.hh>
+ #include <XrdCl/XrdClDefaultEnv.hh>
++#include <XrdVersion.hh>
+ #include <iostream>
+
+ //------------------------------------------------------------------------------
diff --git a/sci-physics/root/files/rootd.confd b/sci-physics/root/files/rootd.confd
new file mode 100644
index 000000000000..7516b8c9b6dd
--- /dev/null
+++ b/sci-physics/root/files/rootd.confd
@@ -0,0 +1,8 @@
+# conf.d file for root daemon
+
+# User to run as (default is `rootd')
+ROOTD_USER="rootd"
+
+# Please refer to the rootd(1) man(1) page for more information on
+# command line parameters.
+ROOTD_OPTS=""
diff --git a/sci-physics/root/files/rootd.initd b/sci-physics/root/files/rootd.initd
new file mode 100644
index 000000000000..4961ad56380f
--- /dev/null
+++ b/sci-physics/root/files/rootd.initd
@@ -0,0 +1,28 @@
+#!/sbin/runscript
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+depend() {
+ need net
+ use logger
+ provide root-file-server
+}
+
+start() {
+ ebegin "Starting ROOT file server"
+ pid=$(start-stop-daemon --start --quiet --user ${ROOTD_USER} \
+ --pidfile /var/run/rootd.pid \
+ --exec /usr/bin/rootd -- ${ROOTD_OPTS})
+ retval=$?
+ echo ${ROOTD_PID} > /var/run/rootd.pid
+ eend ${retval}
+}
+
+stop() {
+ ebegin "Stopping ROOT file server"
+ start-stop-daemon --stop --quiet \
+ --pidfile /var/run/rootd.pid \
+ --exec /usr/bin/rootd
+ eend $?
+}
diff --git a/sci-physics/root/metadata.xml b/sci-physics/root/metadata.xml
new file mode 100644
index 000000000000..2d5f75aecc7c
--- /dev/null
+++ b/sci-physics/root/metadata.xml
@@ -0,0 +1,35 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+<maintainer>
+ <email>bircoph@gentoo.org</email>
+ <name>Andrew Savchenko</name>
+</maintainer>
+<herd>sci-physics</herd>
+<longdescription lang="en">
+ ROOT Object Oriented Technologies is an object oriented data
+ analysis framework written in C++ by the CERN. Widely used in
+ high energy physics, but also in other data analysis applications. It
+ contains the CINT C/C++ interpreter and many classes such as
+ statistics, serialization, optimization, linear algebra, graphics,
+ GUI toolkit, and a complete visualization framework.
+</longdescription>
+<use>
+ <flag name="c++11"> Build ROOT using the C++11 standard</flag>
+ <flag name="c++14"> Build ROOT using the C++14 standard</flag>
+ <flag name="clarens"> Build the Clarens and PEAC plug-ins, to use in a GRID enabled analysis</flag>
+ <flag name="fits">Support for images and data from FITS files with <pkg>sci-libs/cfitsio</pkg></flag>
+ <flag name="gdml">Enable GDML writer and reader</flag>
+ <flag name="geocad">Enable ROOT-CAD interface using <pkg>sci-libs/opencascade</pkg></flag>
+ <flag name="htmldoc">Generate html documentation</flag>
+ <flag name="http">Enable http server support including but not limited to fastcgi support</flag>
+ <flag name="math">Build all math related libraries plugins, needs <pkg>sci-libs/gsl</pkg> </flag>
+ <flag name="memstat">Build memory statistics library, helps to detect memory leaks</flag>
+ <flag name="pythia6">Build the interface for <pkg>sci-physics/pythia</pkg> version 6.x </flag>
+ <flag name="pythia8">Build the interface for <pkg>sci-physics/pythia</pkg> version 8.x </flag>
+ <flag name="reflex">Build the reflection database for the C++ interpreter</flag>
+ <flag name="shadow">Enable shadow authentication in rootd and proofd</flag>
+ <flag name="table">Build libTable contrib library</flag>
+ <flag name="xrootd">Build the interface for <pkg>net-libs/xrootd</pkg> </flag>
+</use>
+</pkgmetadata>
diff --git a/sci-physics/root/root-5.32.03-r2.ebuild b/sci-physics/root/root-5.32.03-r2.ebuild
new file mode 100644
index 000000000000..7b03c47ffd02
--- /dev/null
+++ b/sci-physics/root/root-5.32.03-r2.ebuild
@@ -0,0 +1,378 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=4
+
+PYTHON_DEPEND="python? 2"
+
+if [[ ${PV} == "9999" ]] ; then
+ _SVN=subversion
+ ESVN_REPO_URI="https://root.cern.ch/svn/root/trunk"
+ ESVN_OPTIONS="--non-interactive --trust-server-cert"
+ SRC_URI=""
+ KEYWORDS=""
+else
+ SRC_URI="ftp://root.cern.ch/${PN}/${PN}_v${PV}.source.tar.gz"
+ KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
+fi
+
+inherit elisp-common eutils fdo-mime fortran-2 multilib python toolchain-funcs user ${_SVN}
+
+ROOFIT_DOC_PV=2.91-33
+TMVA_DOC_PV=4.03
+PATCH_PV=5.28.00b
+PATCH_PV2=5.32.00
+
+DESCRIPTION="C++ data analysis framework and interpreter from CERN"
+HOMEPAGE="http://root.cern.ch/"
+SRC_URI="${SRC_URI}
+ doc? ( ftp://root.cern.ch/${PN}/doc/ROOTUsersGuide.pdf
+ math? (
+ ftp://root.cern.ch/${PN}/doc/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf
+ http://tmva.sourceforge.net/docu/TMVAUsersGuide.pdf -> TMVAUsersGuide-v${TMVA_DOC_PV}.pdf )
+ htmldoc? (
+ http://root.cern.ch/drupal/sites/default/files/rootdrawing-logo.png
+ http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/root-banner.png
+ http://root.cern.ch/drupal/sites/all/themes/newsflash/images/info.png ) )"
+
+SLOT="0"
+LICENSE="LGPL-2.1"
+IUSE="+X afs avahi clarens doc emacs examples fits fftw graphviz htmldoc kerberos
+ ldap +math mpi mysql odbc +opengl openmp oracle postgres prefix pythia6
+ pythia8 python qt4 +reflex ruby ssl xft xinetd xml xrootd"
+
+CDEPEND="
+ app-arch/xz-utils
+ >=dev-lang/cfortran-4.4-r2
+ dev-libs/libpcre
+ media-fonts/dejavu
+ media-libs/freetype
+ media-libs/giflib
+ media-libs/libpng:0
+ media-libs/tiff:0
+ sys-libs/zlib
+ virtual/jpeg
+ virtual/shadow
+ X? (
+ media-libs/ftgl
+ media-libs/glew
+ x11-libs/libX11
+ x11-libs/libXext
+ x11-libs/libXpm
+ || (
+ >=media-libs/libafterimage-1.20[gif,jpeg,png,tiff]
+ >=x11-wm/afterstep-2.2.11[gif,jpeg,png,tiff]
+ )
+ opengl? ( virtual/opengl virtual/glu x11-libs/gl2ps )
+ qt4? (
+ dev-qt/qtgui:4
+ dev-qt/qtopengl:4
+ dev-qt/qt3support:4
+ dev-qt/qtsvg:4
+ dev-qt/qtwebkit:4
+ dev-qt/qtxmlpatterns:4 )
+ xft? ( x11-libs/libXft )
+ )
+ afs? ( net-fs/openafs )
+ avahi? ( net-dns/avahi )
+ clarens? ( dev-libs/xmlrpc-c[curl] )
+ emacs? ( virtual/emacs )
+ fits? ( sci-libs/cfitsio )
+ fftw? ( sci-libs/fftw:3.0 )
+ graphviz? ( media-gfx/graphviz )
+ kerberos? ( virtual/krb5 )
+ ldap? ( net-nds/openldap )
+ math? ( sci-libs/gsl sci-mathematics/unuran mpi? ( virtual/mpi ) )
+ mysql? ( virtual/mysql )
+ odbc? ( || ( dev-db/libiodbc dev-db/unixODBC ) )
+ oracle? ( dev-db/oracle-instantclient-basic )
+ postgres? ( dev-db/postgresql )
+ pythia6? ( sci-physics/pythia:6 )
+ pythia8? ( sci-physics/pythia:8 )
+ ruby? (
+ dev-lang/ruby
+ dev-ruby/rubygems )
+ ssl? ( dev-libs/openssl )
+ xml? ( dev-libs/libxml2 )
+ xrootd? ( net-libs/xrootd )"
+
+DEPEND="${CDEPEND}
+ virtual/pkgconfig"
+
+RDEPEND="${CDEPEND}
+ reflex? ( dev-cpp/gccxml )
+ xinetd? ( sys-apps/xinetd )"
+
+PDEPEND="htmldoc? ( ~app-doc/root-docs-${PV} )"
+
+REQUIRED_USE="
+ !X? ( !opengl !qt4 !xft )
+ mpi? ( math !openmp )
+ openmp? ( math !mpi )"
+
+S="${WORKDIR}/${PN}"
+
+pkg_setup() {
+ fortran-2_pkg_setup
+ python_pkg_setup
+ echo
+ elog "There are extra options on packages not yet in Gentoo:"
+ elog "AliEn, castor, Chirp, dCache, gfal, gLite, Globus,"
+ elog "HDFS, Monalisa, MaxDB/SapDB, SRP."
+ elog "You can use the env variable EXTRA_ECONF variable for this."
+ elog "For example, for SRP, you would set: "
+ elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=/usr/$(get_libdir)\""
+ echo
+ enewgroup rootd
+ enewuser rootd -1 -1 /var/spool/rootd rootd
+
+ if use math; then
+ if use openmp; then
+ if [[ $(tc-getCC)$ == *gcc* ]] && ! tc-has-openmp; then
+ ewarn "You are using a gcc without OpenMP capabilities"
+ die "Need an OpenMP capable compiler"
+ else
+ export USE_OPENMP=1 USE_PARALLEL_MINUIT2=1
+ fi
+ elif use mpi; then
+ export USE_MPI=1 USE_PARALLEL_MINUIT2=1
+ fi
+ fi
+}
+
+src_prepare() {
+ epatch \
+ "${FILESDIR}"/${PN}-${PATCH_PV}-prop-ldflags.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV}-asneeded.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV2}-nobyte-compile.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV}-glibc212.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV}-unuran.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV2}-afs.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV2}-cfitsio.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV2}-chklib64.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV2}-explicit-functions.patch \
+ "${FILESDIR}"/${PN}-${PATCH_PV2}-dotfont.patch
+
+ # make sure we use system libs and headers
+ rm montecarlo/eg/inc/cfortran.h README/cfortran.doc || die
+ rm -rf graf2d/asimage/src/libAfterImage || die
+ rm -rf graf3d/ftgl/{inc,src} || die
+ rm -rf graf2d/freetype/src || die
+ rm -rf graf3d/glew/{inc,src} || die
+ rm -rf core/pcre/src || die
+ rm -rf math/unuran/src/unuran-*.tar.gz || die
+ LANG=C LC_ALL=C find core/zip -type f -name "[a-z]*" -print0 | xargs -0 rm -f || die
+ rm -rf core/lzma/src/*.tar.gz || die
+ rm graf3d/gl/{inc,src}/gl2ps.* || die
+ sed -i -e 's/^GLLIBS *:= .* $(OPENGLLIB)/& -lgl2ps/' graf3d/gl/Module.mk || die
+
+ # In Gentoo, libPythia6 is called libpythia6
+ # libungif is called libgif,
+ # iodbc is in /usr/include/iodbc
+ # pg_config.h is checked instead of libpq-fe.h
+ sed -i \
+ -e 's:libPythia6:libpythia6:g' \
+ -e 's:ungif:gif:g' \
+ -e 's:$ODBCINCDIR:$ODBCINCDIR /usr/include/iodbc:' \
+ -e 's:libpq-fe.h:pg_config.h:' \
+ configure || die "adjusting configure for Gentoo failed"
+
+ # prefixify the configure script
+ sed -i \
+ -e 's:/usr:${EPREFIX}/usr:g' \
+ configure || die "prefixify configure failed"
+
+ # QTDIR only used for qt3 in gentoo, and configure looks for it.
+ unset QTDIR
+
+ # Make html docs self-consistent for offline work (based on Fedora spec)
+ if use htmldoc; then
+ epatch "${FILESDIR}"/${PN}-${PATCH_PV2}-htmldoc.patch
+ # make images local
+ sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/!!' \
+ -i etc/html/ROOT.css || die "htmldoc sed failed"
+ sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/!!' \
+ -i etc/html/ROOT.css || die "htmldoc sed failed"
+ sed 's!http://root.cern.ch/drupal/sites/default/files/!!' \
+ -i etc/html/header.html || die "htmldoc sed failed"
+
+ cp "${DISTDIR}"/{rootdrawing-logo.png,root-banner.png,info.png} etc/html ||
+ die "htmldoc preparation failed"
+ fi
+}
+
+src_configure() {
+ # the configure script is not the standard autotools
+ ./configure \
+ --prefix="${EPREFIX}"/usr \
+ --etcdir="${EPREFIX}"/etc/root \
+ --libdir="${EPREFIX}"/usr/$(get_libdir)/${PN} \
+ --docdir="${EPREFIX}"/usr/share/doc/${PF} \
+ --tutdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tutorials \
+ --testdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tests \
+ --with-cc=$(tc-getCC) \
+ --with-cxx=$(tc-getCXX) \
+ --with-f77=$(tc-getFC) \
+ --with-ld=$(tc-getCXX) \
+ --with-afs-shared=yes \
+ --with-sys-iconpath="${EPREFIX}"/usr/share/pixmaps \
+ --disable-builtin-afterimage \
+ --disable-builtin-freetype \
+ --disable-builtin-ftgl \
+ --disable-builtin-glew \
+ --disable-builtin-pcre \
+ --disable-builtin-zlib \
+ --disable-builtin-lzma \
+ --disable-cling \
+ --enable-astiff \
+ --enable-exceptions \
+ --enable-explicitlink \
+ --enable-gdml \
+ --enable-memstat \
+ --enable-shadowpw \
+ --enable-shared \
+ --enable-soversion \
+ --enable-table \
+ --fail-on-missing \
+ $(use_enable X x11) \
+ $(use_enable X asimage) \
+ $(use_enable afs) \
+ $(use_enable avahi bonjour) \
+ $(use_enable clarens) \
+ $(use_enable clarens peac) \
+ $(use_enable fits fitsio) \
+ $(use_enable fftw fftw3) \
+ $(use_enable graphviz gviz) \
+ $(use_enable kerberos krb5) \
+ $(use_enable ldap) \
+ $(use_enable math gsl-shared) \
+ $(use_enable math genvector) \
+ $(use_enable math mathmore) \
+ $(use_enable math minuit2) \
+ $(use_enable math roofit) \
+ $(use_enable math tmva) \
+ $(use_enable math unuran) \
+ $(use_enable mysql) \
+ $(use_enable odbc) \
+ $(use_enable opengl) \
+ $(use_enable postgres pgsql) \
+ $(use_enable prefix rpath) \
+ $(use_enable pythia6) \
+ $(use_enable pythia8) \
+ $(use_enable python) \
+ $(use_enable qt4 qt) \
+ $(use_enable qt4 qtgsi) \
+ $(use_enable reflex cintex) \
+ $(use_enable reflex) \
+ $(use_enable ruby) \
+ $(use_enable ssl) \
+ $(use_enable xft) \
+ $(use_enable xml) \
+ $(use_enable xrootd) \
+ ${EXTRA_ECONF} \
+ || die "configure failed"
+}
+
+src_compile() {
+ emake OPT="${CXXFLAGS}" F77OPT="${FFLAGS}"
+ if use emacs; then
+ elisp-compile build/misc/*.el || die "elisp-compile failed"
+ fi
+}
+
+doc_install() {
+ cd "${S}"
+ if use doc; then
+ einfo "Installing user's guides"
+ dodoc "${DISTDIR}"/ROOTUsersGuide.pdf
+ use math && dodoc \
+ "${DISTDIR}"/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf \
+ "${DISTDIR}"/TMVAUsersGuide-v${TMVA_DOC_PV}.pdf
+ fi
+
+ if use examples; then
+ # these should really be taken care of by the root make install
+ insinto /usr/share/doc/${PF}/examples/tutorials/tmva
+ doins -r tmva/test
+ else
+ rm -rf "${ED}"/usr/share/doc/${PF}/examples || die
+ fi
+}
+
+daemon_install() {
+ cd "${S}"
+ local daemons="rootd proofd"
+ dodir /var/spool/rootd
+ fowners rootd:rootd /var/spool/rootd
+ dodir /var/spool/rootd/{pub,tmp}
+ fperms 1777 /var/spool/rootd/{pub,tmp}
+
+ for i in ${daemons}; do
+ newinitd "${FILESDIR}"/${i}.initd ${i}
+ newconfd "${FILESDIR}"/${i}.confd ${i}
+ done
+ if use xinetd; then
+ insinto /etc/xinetd
+ doins etc/daemons/{rootd,proofd}.xinetd
+ fi
+}
+
+desktop_install() {
+ cd "${S}"
+ sed -e 's,@prefix@,/usr,' \
+ build/package/debian/root-system-bin.desktop.in > root.desktop
+ domenu root.desktop
+ doicon "${S}"/build/package/debian/root-system-bin.png
+
+ insinto /usr/share/icons/hicolor/48x48/mimetypes
+ doins build/package/debian/application-x-root.png
+
+ insinto /usr/share/icons/hicolor/48x48/apps
+ doicon build/package/debian/root-system-bin.xpm
+}
+
+src_install() {
+ emake DESTDIR="${D}" install
+
+ echo "LDPATH=${EPREFIX}/usr/$(get_libdir)/root" > 99root
+ use pythia8 && echo "PYTHIA8=${EPREFIX}/usr" >> 99root
+ use python && echo "PYTHONPATH=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
+ use ruby && echo "RUBYLIB=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
+ doenvd 99root
+
+ # The build system installs Emacs support unconditionally and in the wrong
+ # directory. Remove it and call elisp-install in case of USE=emacs.
+ rm -rf "${ED}"/usr/share/emacs
+ if use emacs; then
+ elisp-install ${PN} build/misc/*.{el,elc} || die "elisp-install failed"
+ fi
+
+ doc_install
+ daemon_install
+ desktop_install
+
+ # Cleanup of files either already distributed or unused on Gentoo
+ rm "${ED}"usr/share/doc/${PF}/{INSTALL,LICENSE,COPYING.CINT} || die
+ rm "${ED}"usr/share/root/fonts/LICENSE || die
+ pushd "${ED}"usr/$(get_libdir)/root/cint/cint/lib > /dev/null
+ rm -f posix/mktypes dll_stl/setup \
+ G__* dll_stl/G__* dll_stl/rootcint_* posix/exten.o || die
+ rm -f "${ED}"usr/$(get_libdir)/root/cint/cint/include/makehpib || die
+ rm -f "${ED}"/etc/root/proof/*.sample || die
+ rm -rf "${ED}"/etc/root/daemons || die
+ popd > /dev/null
+ # these should be in PATH
+ mv "${ED}"etc/root/proof/utils/pq2/pq2* \
+ "${ED}"usr/bin/ || die
+}
+
+pkg_postinst() {
+ fdo-mime_desktop_database_update
+ use python && python_mod_optimize /usr/$(get_libdir)/root
+}
+
+pkg_postrm() {
+ fdo-mime_desktop_database_update
+ use python && python_mod_cleanup /usr/$(get_libdir)/root
+}
diff --git a/sci-physics/root/root-5.34.26.ebuild b/sci-physics/root/root-5.34.26.ebuild
new file mode 100644
index 000000000000..3ba947eccbb0
--- /dev/null
+++ b/sci-physics/root/root-5.34.26.ebuild
@@ -0,0 +1,453 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+if [[ ${PV} == "9999" ]] ; then
+ inherit git-r3
+ EGIT_REPO_URI="http://root.cern.ch/git/root.git"
+else
+ SRC_URI="ftp://root.cern.ch/${PN}/${PN}_v${PV}.source.tar.gz"
+ KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+fi
+
+PYTHON_COMPAT=( python2_7 )
+
+inherit elisp-common eutils fdo-mime fortran-2 multilib python-single-r1 \
+ toolchain-funcs user versionator
+
+DESCRIPTION="C++ data analysis framework and interpreter from CERN"
+HOMEPAGE="http://root.cern.ch/"
+
+SLOT="0/$(get_version_component_range 1-3 ${PV})"
+LICENSE="LGPL-2.1 freedist MSttfEULA LGPL-3 libpng UoI-NCSA"
+IUSE="+X afs avahi c++11 c++14 doc emacs examples fits fftw
+ graphviz http kerberos ldap +math minimal mpi mysql odbc
+ +opengl openmp oracle postgres prefix pythia6 pythia8
+ python qt4 +reflex ruby sqlite ssl xinetd xml xrootd"
+
+# TODO: add support for: davix
+# TODO: unbundle: vdt
+
+REQUIRED_USE="
+ !X? ( !minimal? ( !opengl !qt4 ) )
+ mpi? ( math !openmp )
+ openmp? ( math !mpi )
+ python? ( ${PYTHON_REQUIRED_USE} )
+"
+
+CDEPEND="
+ app-arch/xz-utils:0=
+ >=dev-lang/cfortran-4.4-r2
+ dev-libs/libpcre:3=
+ media-fonts/dejavu
+ media-libs/freetype:2=
+ media-libs/giflib:0=
+ media-libs/libpng:0=
+ media-libs/tiff:0=
+ sys-libs/zlib:0=
+ virtual/jpeg:0
+ virtual/shadow
+ X? (
+ media-libs/ftgl:0=
+ media-libs/glew:0=
+ x11-libs/libX11:0=
+ x11-libs/libXext:0=
+ x11-libs/libXpm:0=
+ !minimal? (
+ || (
+ media-libs/libafterimage:0=[gif,jpeg,png,tiff]
+ >=x11-wm/afterstep-2.2.11:0=[gif,jpeg,png,tiff]
+ )
+ opengl? ( virtual/opengl virtual/glu x11-libs/gl2ps:0= )
+ qt4? (
+ dev-qt/qtgui:4=
+ dev-qt/qtopengl:4=
+ dev-qt/qt3support:4=
+ dev-qt/qtsvg:4=
+ dev-qt/qtwebkit:4=
+ dev-qt/qtxmlpatterns:4=
+ )
+ x11-libs/libXft:0=
+ )
+ )
+ !minimal? (
+ afs? ( net-fs/openafs )
+ avahi? ( net-dns/avahi:0= )
+ emacs? ( virtual/emacs )
+ fits? ( sci-libs/cfitsio:0= )
+ fftw? ( sci-libs/fftw:3.0= )
+ graphviz? ( media-gfx/graphviz:0= )
+ http? ( dev-libs/fcgi:0= )
+ kerberos? ( virtual/krb5 )
+ ldap? ( net-nds/openldap:0= )
+ math? (
+ sci-libs/gsl:0=
+ sci-mathematics/unuran:0=
+ mpi? ( virtual/mpi )
+ )
+ mysql? ( virtual/mysql )
+ odbc? ( || ( dev-db/libiodbc:0= dev-db/unixODBC:0= ) )
+ oracle? ( dev-db/oracle-instantclient-basic:0= )
+ postgres? ( dev-db/postgresql:= )
+ pythia6? ( sci-physics/pythia:6= )
+ pythia8? ( >=sci-physics/pythia-8.1.80:8= <sci-physics/pythia-8.2.0:8= )
+ python? ( ${PYTHON_DEPS} )
+ ruby? (
+ dev-lang/ruby:=
+ dev-ruby/rubygems:=
+ )
+ sqlite? ( dev-db/sqlite:3= )
+ ssl? ( dev-libs/openssl:0= )
+ xml? ( dev-libs/libxml2:2= )
+ xrootd? ( >=net-libs/xrootd-3.3.5:0= )
+ )"
+
+DEPEND="${CDEPEND}
+ virtual/pkgconfig"
+
+RDEPEND="${CDEPEND}
+ reflex? ( dev-cpp/gccxml )
+ xinetd? ( sys-apps/xinetd )"
+
+PDEPEND="doc? ( !minimal? ( ~app-doc/root-docs-${PV}[http=,math=] ) )"
+
+S="${WORKDIR}/${PN}"
+
+# install stuff in ${P} and not ${PF} for easier tracking in root-docs
+DOC_DIR="/usr/share/doc/${P}"
+
+die_compiler() {
+ eerror "You are using a $(tc-getCXX)-$5 without C++$1 capabilities"
+ die "Need one of the following C++$1 capable compilers:\n"\
+ " >=sys-devel/gcc[cxx]-$2\n"\
+ " >=sys-devel/clang-$3\n"\
+ " >=dev-lang/icc-$4"
+}
+
+# check compiler to satisfy minimal versions
+# $1 - std version
+# $2 - g++
+# $3 - clang++
+# $4 - icc/icpc
+check_compiler() {
+ local ver
+ case "$(tc-getCXX)" in
+ *clang++*)
+ ver="$(best_version sys-devel/clang | sed 's:sys-devel/clang-::')"
+ ;;
+ *g++*)
+ ver="$(gcc-version)"
+ ;;
+ *icc*|*icpc*)
+ ver="$(best_version dev-lang/icc | sed 's:dev-lang/icc-::')"
+ ;;
+ *)
+ ewarn "You are using an unsupported compiler."
+ ewarn "Please report any issues upstream."
+ return 0
+ ;;
+ esac
+ version_is_at_least "$3" "${ver}" || die_compiler "$1" "$2" "$3" "$4" "${ver}"
+}
+
+pkg_setup() {
+ fortran-2_pkg_setup
+ use python && python-single-r1_pkg_setup
+ echo
+ elog "There are extra options on packages not yet in Gentoo:"
+ elog "Afdsmgrd, AliEn, castor, Chirp, dCache, gfal, Globus, gLite,"
+ elog "HDFS, Monalisa, MaxDB/SapDB, SRP."
+ elog "You can use the env variable EXTRA_ECONF variable for this."
+ elog "For example, for SRP, you would set: "
+ elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=${EROOT%/}/usr/$(get_libdir)\""
+ echo
+
+ enewgroup rootd
+ enewuser rootd -1 -1 /var/spool/rootd rootd
+
+ use minimal && return
+
+ if use math; then
+ if use openmp; then
+ if [[ "$(tc-getCXX)" == *g++* && "$(tc-getCXX)" != *clang++* ]] && ! tc-has-openmp; then
+ ewarn "You are using a g++ without OpenMP capabilities"
+ die "Need an OpenMP capable compiler"
+ else
+ export USE_OPENMP=1 USE_PARALLEL_MINUIT2=1
+ fi
+ elif use mpi; then
+ export USE_MPI=1 USE_PARALLEL_MINUIT2=1
+ fi
+ fi
+
+ use c++11 && check_compiler "11" "4.8" "3.3" "13"
+ use c++14 && check_compiler "14" "4.9" "3.4" "15"
+}
+
+src_prepare() {
+ epatch \
+ "${FILESDIR}"/${PN}-5.28.00b-glibc212.patch \
+ "${FILESDIR}"/${PN}-5.32.00-afs.patch \
+ "${FILESDIR}"/${PN}-5.32.00-cfitsio.patch \
+ "${FILESDIR}"/${PN}-5.32.00-chklib64.patch \
+ "${FILESDIR}"/${PN}-5.32.00-dotfont.patch \
+ "${FILESDIR}"/${PN}-5.34.05-nobyte-compile.patch \
+ "${FILESDIR}"/${PN}-5.34.13-unuran.patch \
+ "${FILESDIR}"/${PN}-5.34.13-desktop.patch \
+ "${FILESDIR}"/${PN}-5.34.26-ldflags.patch
+
+ # make sure we use system libs and headers
+ rm montecarlo/eg/inc/cfortran.h README/cfortran.doc || die
+ rm -r graf2d/asimage/src/libAfterImage || die
+ rm -r graf3d/ftgl/{inc,src} || die
+ rm -r graf2d/freetype/src || die
+ rm -r graf3d/glew/{inc,src} || die
+ rm -r core/pcre/src || die
+ rm -r math/unuran/src/unuran-*.tar.gz || die
+ LANG=C LC_ALL=C find core/zip -type f -name "[a-z]*" -print0 | \
+ xargs -0 rm || die
+ rm -r core/lzma/src/*.tar.gz || die
+ rm graf3d/gl/{inc,src}/gl2ps.* || die
+ sed -i -e 's/^GLLIBS *:= .* $(OPENGLLIB)/& -lgl2ps/' \
+ graf3d/gl/Module.mk || die
+
+ # In Gentoo, libPythia6 is called libpythia6
+ # iodbc is in /usr/include/iodbc
+ # pg_config.h is checked instead of libpq-fe.h
+ sed -i \
+ -e 's:libPythia6:libpythia6:g' \
+ -e 's:$ODBCINCDIR:$ODBCINCDIR /usr/include/iodbc:' \
+ -e 's:libpq-fe.h:pg_config.h:' \
+ configure || die "adjusting configure for Gentoo failed"
+
+ # prefixify the configure script
+ sed -i \
+ -e 's:/usr:${EPREFIX}/usr:g' \
+ configure || die "prefixify configure failed"
+
+ # CSS should use local images
+ sed -i -e 's,http://.*/,,' etc/html/ROOT.css || die "html sed failed"
+
+ # fix reflex path (bug #497280)
+ sed -i -e 's|${ROOTSYS}/lib|@libdir@|' config/genreflex.in || die
+
+ # QTDIR only used for qt3 in gentoo, and configure looks for it.
+ unset QTDIR
+}
+
+src_configure() {
+ local -a myconf
+ # Some compilers need special care
+ case "$(tc-getCXX)" in
+ *clang++*)
+ myconf=(
+ --with-clang
+ --with-f77="$(tc-getFC)"
+ )
+ ;;
+ *icc*|*icpc*)
+ # For icc we need to provide architecture manually
+ # and not to tamper with tc-get*
+ use x86 && myconf=( linuxicc )
+ use amd64 && myconf=( linuxx8664icc )
+ ;;
+ *) # gcc goes here too
+ myconf=(
+ --with-cc="$(tc-getCC)"
+ --with-cxx="$(tc-getCXX)"
+ --with-f77="$(tc-getFC)"
+ --with-ld="$(tc-getCXX)"
+ )
+ ;;
+ esac
+
+ # the configure script is not the standard autotools
+ myconf+=(
+ --prefix="${EPREFIX}/usr"
+ --etcdir="${EPREFIX}/etc/root"
+ --libdir="${EPREFIX}/usr/$(get_libdir)/${PN}"
+ --docdir="${EPREFIX}${DOC_DIR}"
+ --tutdir="${EPREFIX}${DOC_DIR}/examples/tutorials"
+ --testdir="${EPREFIX}${DOC_DIR}/examples/tests"
+ --disable-werror
+ --nohowto
+ --cflags='${CFLAGS}'
+ --cxxflags='${CXXFLAGS}'
+ )
+
+ if use minimal; then
+ myconf+=( $(usex X --gminimal --minimal) )
+ else
+ myconf+=(
+ --with-afs-shared=yes
+ --with-sys-iconpath="${EPREFIX}/usr/share/pixmaps"
+ --disable-builtin-afterimage
+ --disable-builtin-ftgl
+ --disable-builtin-freetype
+ --disable-builtin-glew
+ --disable-builtin-pcre
+ --disable-builtin-zlib
+ --disable-builtin-lzma
+ --disable-cling
+ --enable-astiff
+ --enable-explicitlink
+ --enable-gdml
+ --enable-memstat
+ --enable-shadowpw
+ --enable-shared
+ --enable-soversion
+ --enable-table
+ --fail-on-missing
+ $(use_enable X x11)
+ $(use_enable X asimage)
+ $(use_enable X xft)
+ $(use_enable afs)
+ $(use_enable avahi bonjour)
+ $(use_enable c++11 cxx11)
+ $(use_enable c++14 cxx14)
+ $(use_enable fits fitsio)
+ $(use_enable fftw fftw3)
+ $(use_enable graphviz gviz)
+ $(use_enable http)
+ $(use_enable kerberos krb5)
+ $(use_enable ldap)
+ $(use_enable math gsl-shared)
+ $(use_enable math genvector)
+ $(use_enable math mathmore)
+ $(use_enable math minuit2)
+ $(use_enable math roofit)
+ $(use_enable math tmva)
+ $(use_enable math unuran)
+ $(use_enable mysql)
+ $(usex mysql "--with-mysql-incdir=${EPREFIX}/usr/include/mysql" "")
+ $(use_enable odbc)
+ $(use_enable opengl)
+ $(use_enable oracle)
+ $(use_enable postgres pgsql)
+ $(use_enable prefix rpath)
+ $(use_enable pythia6)
+ $(use_enable pythia8)
+ $(use_enable python)
+ $(use_enable qt4 qt)
+ $(use_enable qt4 qtgsi)
+ $(use_enable reflex cintex)
+ $(use_enable reflex)
+ $(use_enable ruby)
+ $(use_enable sqlite)
+ $(use_enable ssl)
+ $(use_enable xml)
+ $(use_enable xrootd)
+ ${EXTRA_ECONF}
+ )
+ fi
+
+ # usex can't be used here, because pg_config may be not
+ # installed with USE="-postgres"
+ use postgres && myconf+=( --with-pgsql-incdir=$(pg_config --includedir) )
+
+ ./configure ${myconf[@]} || die "configure failed"
+}
+
+src_compile() {
+ emake \
+ OPT="${CXXFLAGS}" \
+ F77OPT="${FFLAGS}" \
+ ROOTSYS="${S}" \
+ LD_LIBRARY_PATH="${S}/lib"
+ use emacs && ! use minimal && elisp-compile build/misc/*.el
+}
+
+daemon_install() {
+ local daemons="rootd proofd"
+ dodir /var/spool/rootd
+ fowners rootd:rootd /var/spool/rootd
+ dodir /var/spool/rootd/{pub,tmp}
+ fperms 1777 /var/spool/rootd/{pub,tmp}
+
+ local i
+ for i in ${daemons}; do
+ newinitd "${FILESDIR}"/${i}.initd ${i}
+ newconfd "${FILESDIR}"/${i}.confd ${i}
+ done
+ if use xinetd; then
+ insinto /etc/xinetd
+ doins "${S}"/etc/daemons/{rootd,proofd}.xinetd
+ fi
+}
+
+desktop_install() {
+ cd "${S}"
+ echo "Icon=root-system-bin" >> etc/root.desktop
+ domenu etc/root.desktop
+ doicon build/package/debian/root-system-bin.png
+
+ insinto /usr/share/icons/hicolor/48x48/mimetypes
+ doins build/package/debian/application-x-root.png
+
+ insinto /usr/share/icons/hicolor/48x48/apps
+ doicon build/package/debian/root-system-bin.xpm
+}
+
+cleanup_install() {
+ # Cleanup of files either already distributed or unused on Gentoo
+ pushd "${ED}" > /dev/null
+ rm usr/share/root/fonts/LICENSE || die
+ rm etc/root/proof/*.sample || die
+ rm -r etc/root/daemons || die
+ # these should be in PATH
+ mv etc/root/proof/utils/pq2/pq2* usr/bin/ || die
+ rm ${DOC_DIR#/}/{INSTALL,LICENSE,COPYING.CINT} || die
+ use examples || rm -r ${DOC_DIR#/}/examples || die
+ cd usr/$(get_libdir)/root/cint/cint
+ rm lib/posix/mktypes lib/dll_stl/setup lib/G__* || die
+ rm lib/dll_stl/G__* lib/dll_stl/rootcint_* lib/posix/exten.o || die
+ rm include/makehpib || die
+ popd > /dev/null
+}
+
+src_install() {
+ emake DESTDIR="${D}" install
+
+ echo "LDPATH=${EPREFIX%/}/usr/$(get_libdir)/root" > 99root
+
+ if ! use minimal; then
+ use pythia8 && echo "PYTHIA8=${EPREFIX%/}/usr" >> 99root
+ if use python; then
+ echo "PYTHONPATH=${EPREFIX%/}/usr/$(get_libdir)/root" >> 99root
+ python_optimize "${D}/usr/$(get_libdir)/root"
+ use reflex && python_optimize "${D}/usr/$(get_libdir)/root/python/genreflex/"
+ fi
+ use ruby && \
+ echo "RUBYLIB=${EPREFIX%/}/usr/$(get_libdir)/root" >> 99root
+ use emacs && elisp-install ${PN} build/misc/*.{el,elc}
+ if use examples; then
+ # these should really be taken care of by the root make install
+ insinto ${DOC_DIR}/examples/tutorials/tmva
+ doins -r tmva/test
+ fi
+ fi
+ doenvd 99root
+
+ # The build system installs Emacs support unconditionally in the wrong
+ # directory. Remove it and call elisp-install in case of USE=emacs.
+ rm -r "${ED}"/usr/share/emacs || die
+
+ daemon_install
+ desktop_install
+ cleanup_install
+
+ # do not copress files used by ROOT's CLI (.credit, .demo, .license)
+ docompress -x "${DOC_DIR}"/{CREDITS,examples/tutorials}
+ # needed for .license command to work
+ dosym "${ED}"usr/portage/licenses/LGPL-2.1 "${DOC_DIR}/LICENSE"
+}
+
+pkg_postinst() {
+ fdo-mime_desktop_database_update
+}
+
+pkg_postrm() {
+ fdo-mime_desktop_database_update
+}
diff --git a/sci-physics/root/root-5.34.32.ebuild b/sci-physics/root/root-5.34.32.ebuild
new file mode 100644
index 000000000000..915e7123c314
--- /dev/null
+++ b/sci-physics/root/root-5.34.32.ebuild
@@ -0,0 +1,437 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+if [[ ${PV} == "9999" ]] ; then
+ inherit git-r3
+ EGIT_REPO_URI="http://root.cern.ch/git/root.git"
+else
+ SRC_URI="ftp://root.cern.ch/${PN}/${PN}_v${PV}.source.tar.gz"
+ KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+fi
+
+PYTHON_COMPAT=( python2_7 )
+
+inherit elisp-common eutils fdo-mime fortran-2 multilib python-single-r1 \
+ toolchain-funcs user versionator
+
+DESCRIPTION="C++ data analysis framework and interpreter from CERN"
+HOMEPAGE="http://root.cern.ch/"
+
+SLOT="0/$(get_version_component_range 1-3 ${PV})"
+LICENSE="LGPL-2.1 freedist MSttfEULA LGPL-3 libpng UoI-NCSA"
+IUSE="+X afs avahi c++11 c++14 doc emacs examples fits fftw gdml
+ graphviz http kerberos ldap +math +memstat mpi mysql odbc
+ +opengl openmp oracle postgres prefix pythia6 pythia8
+ python qt4 +reflex ruby shadow sqlite ssl table +tiff xinetd xml xrootd"
+
+# TODO: add support for: davix
+# TODO: unbundle: vdt
+
+REQUIRED_USE="
+ !X? ( !opengl !qt4 !tiff )
+ mpi? ( math !openmp )
+ openmp? ( math !mpi )
+ python? ( ${PYTHON_REQUIRED_USE} )
+"
+
+CDEPEND="
+ app-arch/xz-utils:0=
+ >=dev-lang/cfortran-4.4-r2
+ dev-libs/libpcre:3=
+ media-fonts/dejavu
+ media-libs/freetype:2=
+ media-libs/libpng:0=
+ sys-libs/zlib:0=
+ X? (
+ media-libs/ftgl:0=
+ media-libs/glew:0=
+ x11-libs/libX11:0=
+ x11-libs/libXext:0=
+ x11-libs/libXpm:0=
+ || (
+ media-libs/libafterimage:0=[gif,jpeg,png,tiff?]
+ >=x11-wm/afterstep-2.2.11:0=[gif,jpeg,png,tiff?]
+ )
+ opengl? ( virtual/opengl virtual/glu x11-libs/gl2ps:0= )
+ qt4? (
+ dev-qt/qtgui:4=
+ dev-qt/qtopengl:4=
+ dev-qt/qt3support:4=
+ dev-qt/qtsvg:4=
+ dev-qt/qtwebkit:4=
+ dev-qt/qtxmlpatterns:4=
+ )
+ x11-libs/libXft:0=
+ )
+ afs? ( net-fs/openafs )
+ avahi? ( net-dns/avahi:0= )
+ emacs? ( virtual/emacs )
+ fits? ( sci-libs/cfitsio:0= )
+ fftw? ( sci-libs/fftw:3.0= )
+ graphviz? ( media-gfx/graphviz:0= )
+ http? ( dev-libs/fcgi:0= )
+ kerberos? ( virtual/krb5 )
+ ldap? ( net-nds/openldap:0= )
+ math? (
+ sci-libs/gsl:0=
+ sci-mathematics/unuran:0=
+ mpi? ( virtual/mpi )
+ )
+ mysql? ( virtual/mysql )
+ odbc? ( || ( dev-db/libiodbc:0= dev-db/unixODBC:0= ) )
+ oracle? ( dev-db/oracle-instantclient-basic:0= )
+ postgres? ( dev-db/postgresql:= )
+ pythia6? ( sci-physics/pythia:6= )
+ pythia8? ( >=sci-physics/pythia-8.1.80:8= <sci-physics/pythia-8.2.0:8= )
+ python? ( ${PYTHON_DEPS} )
+ ruby? (
+ dev-lang/ruby:=
+ dev-ruby/rubygems:=
+ )
+ shadow? ( virtual/shadow )
+ sqlite? ( dev-db/sqlite:3= )
+ ssl? ( dev-libs/openssl:0= )
+ xml? ( dev-libs/libxml2:2= )
+ xrootd? ( >=net-libs/xrootd-3.3.5:0= )
+"
+
+DEPEND="${CDEPEND}
+ virtual/pkgconfig"
+
+RDEPEND="${CDEPEND}
+ reflex? ( dev-cpp/gccxml )
+ xinetd? ( sys-apps/xinetd )"
+
+PDEPEND="doc? ( ~app-doc/root-docs-${PV}[http=,math=] )"
+
+S="${WORKDIR}/${PN}"
+
+# install stuff in ${P} and not ${PF} for easier tracking in root-docs
+DOC_DIR="/usr/share/doc/${P}"
+
+die_compiler() {
+ eerror "You are using a $(tc-getCXX)-$5 without C++$1 capabilities"
+ die "Need one of the following C++$1 capable compilers:\n"\
+ " >=sys-devel/gcc[cxx]-$2\n"\
+ " >=sys-devel/clang-$3\n"\
+ " >=dev-lang/icc-$4"
+}
+
+# check compiler to satisfy minimal versions
+# $1 - std version
+# $2 - g++
+# $3 - clang++
+# $4 - icc/icpc
+check_compiler() {
+ local ver
+ case "$(tc-getCXX)" in
+ *clang++*)
+ ver="$(best_version sys-devel/clang | sed 's:sys-devel/clang-::')"
+ ;;
+ *g++*)
+ ver="$(gcc-version)"
+ ;;
+ *icc*|*icpc*)
+ ver="$(best_version dev-lang/icc | sed 's:dev-lang/icc-::')"
+ ;;
+ *)
+ ewarn "You are using an unsupported compiler."
+ ewarn "Please report any issues upstream."
+ return 0
+ ;;
+ esac
+ version_is_at_least "$3" "${ver}" || die_compiler "$1" "$2" "$3" "$4" "${ver}"
+}
+
+pkg_setup() {
+ fortran-2_pkg_setup
+ use python && python-single-r1_pkg_setup
+ echo
+ elog "There are extra options on packages not yet in Gentoo:"
+ elog "Afdsmgrd, AliEn, castor, Chirp, dCache, gfal, Globus, gLite,"
+ elog "HDFS, Monalisa, MaxDB/SapDB, SRP."
+ elog "You can use the env variable EXTRA_ECONF variable for this."
+ elog "For example, for SRP, you would set: "
+ elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=${EROOT%/}/usr/$(get_libdir)\""
+ echo
+
+ enewgroup rootd
+ enewuser rootd -1 -1 /var/spool/rootd rootd
+
+ if use math; then
+ if use openmp; then
+ if [[ "$(tc-getCXX)" == *g++* && "$(tc-getCXX)" != *clang++* ]] && ! tc-has-openmp; then
+ ewarn "You are using a g++ without OpenMP capabilities"
+ die "Need an OpenMP capable compiler"
+ else
+ export USE_OPENMP=1 USE_PARALLEL_MINUIT2=1
+ fi
+ elif use mpi; then
+ export USE_MPI=1 USE_PARALLEL_MINUIT2=1
+ fi
+ fi
+
+ use c++11 && check_compiler "11" "4.8" "3.3" "13"
+ use c++14 && check_compiler "14" "4.9" "3.4" "15"
+}
+
+src_prepare() {
+ epatch \
+ "${FILESDIR}"/${PN}-5.28.00b-glibc212.patch \
+ "${FILESDIR}"/${PN}-5.32.00-afs.patch \
+ "${FILESDIR}"/${PN}-5.32.00-cfitsio.patch \
+ "${FILESDIR}"/${PN}-5.32.00-chklib64.patch \
+ "${FILESDIR}"/${PN}-5.32.00-dotfont.patch \
+ "${FILESDIR}"/${PN}-5.34.05-nobyte-compile.patch \
+ "${FILESDIR}"/${PN}-5.34.13-unuran.patch \
+ "${FILESDIR}"/${PN}-5.34.26-ldflags.patch
+
+ # make sure we use system libs and headers
+ rm montecarlo/eg/inc/cfortran.h README/cfortran.doc || die
+ rm -r graf2d/asimage/src/libAfterImage || die
+ rm -r graf3d/ftgl/{inc,src} || die
+ rm -r graf2d/freetype/src || die
+ rm -r graf3d/glew/{inc,src} || die
+ rm -r core/pcre/src || die
+ rm -r math/unuran/src/unuran-*.tar.gz || die
+ LANG=C LC_ALL=C find core/zip -type f -name "[a-z]*" -print0 | \
+ xargs -0 rm || die
+ rm -r core/lzma/src/*.tar.gz || die
+ rm graf3d/gl/{inc,src}/gl2ps.* || die
+ sed -i -e 's/^GLLIBS *:= .* $(OPENGLLIB)/& -lgl2ps/' \
+ graf3d/gl/Module.mk || die
+
+ # In Gentoo, libPythia6 is called libpythia6
+ # iodbc is in /usr/include/iodbc
+ # pg_config.h is checked instead of libpq-fe.h
+ sed -i \
+ -e 's:libPythia6:libpythia6:g' \
+ -e 's:$ODBCINCDIR:$ODBCINCDIR /usr/include/iodbc:' \
+ -e 's:libpq-fe.h:pg_config.h:' \
+ configure || die "adjusting configure for Gentoo failed"
+
+ # prefixify the configure script
+ sed -i \
+ -e 's:/usr:${EPREFIX}/usr:g' \
+ configure || die "prefixify configure failed"
+
+ # CSS should use local images
+ sed -i -e 's,http://.*/,,' etc/html/ROOT.css || die "html sed failed"
+
+ # fix reflex path (bug #497280)
+ sed -i -e 's|${ROOTSYS}/lib|@libdir@|' config/genreflex.in || die
+
+ # QTDIR only used for qt3 in gentoo, and configure looks for it.
+ unset QTDIR
+}
+
+src_configure() {
+ local -a myconf
+ # Some compilers need special care
+ case "$(tc-getCXX)" in
+ *clang++*)
+ myconf=(
+ --with-clang
+ --with-f77="$(tc-getFC)"
+ )
+ ;;
+ *icc*|*icpc*)
+ # For icc we need to provide architecture manually
+ # and not to tamper with tc-get*
+ use x86 && myconf=( linuxicc )
+ use amd64 && myconf=( linuxx8664icc )
+ ;;
+ *) # gcc goes here too
+ myconf=(
+ --with-cc="$(tc-getCC)"
+ --with-cxx="$(tc-getCXX)"
+ --with-f77="$(tc-getFC)"
+ --with-ld="$(tc-getCXX)"
+ )
+ ;;
+ esac
+
+ # the configure script is not the standard autotools
+ myconf+=(
+ --prefix="${EPREFIX}/usr"
+ --etcdir="${EPREFIX}/etc/root"
+ --libdir="${EPREFIX}/usr/$(get_libdir)/${PN}"
+ --docdir="${EPREFIX}${DOC_DIR}"
+ --tutdir="${EPREFIX}${DOC_DIR}/examples/tutorials"
+ --testdir="${EPREFIX}${DOC_DIR}/examples/tests"
+ --cflags='${CFLAGS}'
+ --cxxflags='${CXXFLAGS}'
+ --disable-builtin-afterimage
+ --disable-builtin-ftgl
+ --disable-builtin-freetype
+ --disable-builtin-glew
+ --disable-builtin-lzma
+ --disable-builtin-pcre
+ --disable-builtin-zlib
+ --disable-cling
+ --disable-werror
+ --enable-explicitlink
+ --enable-shared
+ --enable-soversion
+ --fail-on-missing
+ --nohowto
+ --with-afs-shared=yes
+ --with-sys-iconpath="${EPREFIX}/usr/share/pixmaps"
+ $(use_enable X x11)
+ $(use_enable X asimage)
+ $(use_enable X xft)
+ $(use_enable afs)
+ $(use_enable avahi bonjour)
+ $(use_enable c++11 cxx11)
+ $(use_enable c++14 cxx14)
+ $(use_enable fits fitsio)
+ $(use_enable fftw fftw3)
+ $(use_enable gdml)
+ $(use_enable graphviz gviz)
+ $(use_enable http)
+ $(use_enable kerberos krb5)
+ $(use_enable ldap)
+ $(use_enable math genvector)
+ $(use_enable math gsl-shared)
+ $(use_enable math mathmore)
+ $(use_enable math minuit2)
+ $(use_enable math roofit)
+ $(use_enable math tmva)
+ $(use_enable math vc)
+ $(use_enable math vdt)
+ $(use_enable math unuran)
+ $(use_enable memstat)
+ $(use_enable mysql)
+ $(usex mysql "--with-mysql-incdir=${EPREFIX}/usr/include/mysql" "")
+ $(use_enable odbc)
+ $(use_enable opengl)
+ $(use_enable oracle)
+ $(use_enable postgres pgsql)
+ $(use_enable prefix rpath)
+ $(use_enable pythia6)
+ $(use_enable pythia8)
+ $(use_enable python)
+ $(use_enable qt4 qt)
+ $(use_enable qt4 qtgsi)
+ $(use_enable reflex cintex)
+ $(use_enable reflex)
+ $(use_enable ruby)
+ $(use_enable shadow shadowpw)
+ $(use_enable sqlite)
+ $(use_enable ssl)
+ $(use_enable table)
+ $(use_enable tiff astiff)
+ $(use_enable xml)
+ $(use_enable xrootd)
+ ${EXTRA_ECONF}
+ )
+
+ # usex can't be used here, because pg_config may be not
+ # installed with USE="-postgres"
+ use postgres && myconf+=( --with-pgsql-incdir=$(pg_config --includedir) )
+
+ ./configure ${myconf[@]} || die "configure failed"
+}
+
+src_compile() {
+ emake \
+ OPT="${CXXFLAGS}" \
+ F77OPT="${FFLAGS}" \
+ ROOTSYS="${S}" \
+ LD_LIBRARY_PATH="${S}/lib"
+ use emacs && elisp-compile build/misc/*.el
+}
+
+daemon_install() {
+ local daemons="rootd proofd"
+ dodir /var/spool/rootd
+ fowners rootd:rootd /var/spool/rootd
+ dodir /var/spool/rootd/{pub,tmp}
+ fperms 1777 /var/spool/rootd/{pub,tmp}
+
+ local i
+ for i in ${daemons}; do
+ newinitd "${FILESDIR}"/${i}.initd ${i}
+ newconfd "${FILESDIR}"/${i}.confd ${i}
+ done
+ if use xinetd; then
+ insinto /etc/xinetd
+ doins "${S}"/etc/daemons/{rootd,proofd}.xinetd
+ fi
+}
+
+desktop_install() {
+ cd "${S}"
+ echo "Icon=root-system-bin" >> etc/root.desktop
+ domenu etc/root.desktop
+ doicon build/package/debian/root-system-bin.png
+
+ insinto /usr/share/icons/hicolor/48x48/mimetypes
+ doins build/package/debian/application-x-root.png
+
+ insinto /usr/share/icons/hicolor/48x48/apps
+ doicon build/package/debian/root-system-bin.xpm
+}
+
+cleanup_install() {
+ # Cleanup of files either already distributed or unused on Gentoo
+ pushd "${ED}" > /dev/null
+ rm usr/share/root/fonts/LICENSE || die
+ rm etc/root/proof/*.sample || die
+ rm -r etc/root/daemons || die
+ # these should be in PATH
+ mv etc/root/proof/utils/pq2/pq2* usr/bin/ || die
+ rm ${DOC_DIR#/}/{INSTALL,LICENSE,COPYING.CINT} || die
+ use examples || rm -r ${DOC_DIR#/}/examples || die
+ cd usr/$(get_libdir)/root/cint/cint
+ rm lib/posix/mktypes lib/dll_stl/setup lib/G__* || die
+ rm lib/dll_stl/G__* lib/dll_stl/rootcint_* lib/posix/exten.o || die
+ rm include/makehpib || die
+ popd > /dev/null
+}
+
+src_install() {
+ emake DESTDIR="${D}" install
+
+ echo "LDPATH=${EPREFIX%/}/usr/$(get_libdir)/root" > 99root
+
+ use pythia8 && echo "PYTHIA8=${EPREFIX%/}/usr" >> 99root
+ if use python; then
+ echo "PYTHONPATH=${EPREFIX%/}/usr/$(get_libdir)/root" >> 99root
+ python_optimize "${D}/usr/$(get_libdir)/root"
+ use reflex && python_optimize "${D}/usr/$(get_libdir)/root/python/genreflex/"
+ fi
+ use ruby && \
+ echo "RUBYLIB=${EPREFIX%/}/usr/$(get_libdir)/root" >> 99root
+ use emacs && elisp-install ${PN} build/misc/*.{el,elc}
+ if use examples; then
+ # these should really be taken care of by the root make install
+ insinto ${DOC_DIR}/examples/tutorials/tmva
+ doins -r tmva/test
+ fi
+ doenvd 99root
+
+ # The build system installs Emacs support unconditionally in the wrong
+ # directory. Remove it and call elisp-install in case of USE=emacs.
+ rm -r "${ED}"/usr/share/emacs || die
+
+ daemon_install
+ desktop_install
+ cleanup_install
+
+ # do not copress files used by ROOT's CLI (.credit, .demo, .license)
+ docompress -x "${DOC_DIR}"/{CREDITS,examples/tutorials}
+ # needed for .license command to work
+ dosym "${ED}"usr/portage/licenses/LGPL-2.1 "${DOC_DIR}/LICENSE"
+}
+
+pkg_postinst() {
+ fdo-mime_desktop_database_update
+}
+
+pkg_postrm() {
+ fdo-mime_desktop_database_update
+}
diff --git a/sci-physics/root/root-6.02.05-r2.ebuild b/sci-physics/root/root-6.02.05-r2.ebuild
new file mode 100644
index 000000000000..03f0835c3ad6
--- /dev/null
+++ b/sci-physics/root/root-6.02.05-r2.ebuild
@@ -0,0 +1,486 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+if [[ ${PV} == "9999" ]] ; then
+ inherit git-r3
+ EGIT_REPO_URI="http://root.cern.ch/git/root.git"
+else
+ SRC_URI="ftp://root.cern.ch/${PN}/${PN}_v${PV}.source.tar.gz"
+ KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+fi
+
+PYTHON_COMPAT=( python2_7 )
+
+inherit elisp-common eutils fdo-mime fortran-2 multilib python-single-r1 \
+ toolchain-funcs user versionator
+
+DESCRIPTION="C++ data analysis framework and interpreter from CERN"
+HOMEPAGE="http://root.cern.ch/"
+DOC_URI="ftp://root.cern.ch/${PN}/doc"
+
+SLOT="0/$(get_version_component_range 1-3 ${PV})"
+LICENSE="LGPL-2.1 freedist MSttfEULA LGPL-3 libpng UoI-NCSA"
+IUSE="+X afs avahi doc emacs examples fits fftw gdml geocad
+ graphviz http kerberos ldap +math +memstat mpi mysql odbc
+ +opengl openmp oracle postgres prefix pythia6 pythia8
+ python qt4 shadow sqlite ssl table +tiff xinetd xml xrootd"
+
+# TODO: add support for: davix
+# TODO: ROOT-6 supports x32 ABI, but half of its dependencies doesn't
+# TODO: unbundle: cling, vdt
+
+REQUIRED_USE="
+ !X? ( !opengl !qt4 !tiff )
+ mpi? ( math !openmp )
+ openmp? ( math !mpi )
+ python? ( ${PYTHON_REQUIRED_USE} )
+"
+
+CDEPEND="
+ app-arch/xz-utils:0=
+ >=dev-lang/cfortran-4.4-r2
+ dev-libs/libpcre:3=
+ media-fonts/dejavu
+ media-libs/freetype:2=
+ media-libs/libpng:0=
+ >=sys-devel/clang-3.4:=
+ sys-libs/zlib:0=
+ X? (
+ media-libs/ftgl:0=
+ media-libs/glew:0=
+ x11-libs/libX11:0=
+ x11-libs/libXext:0=
+ x11-libs/libXpm:0=
+ || (
+ media-libs/libafterimage:0=[gif,jpeg,png,tiff?]
+ >=x11-wm/afterstep-2.2.11:0=[gif,jpeg,png,tiff?]
+ )
+ opengl? ( virtual/opengl virtual/glu x11-libs/gl2ps:0= )
+ qt4? (
+ dev-qt/qtgui:4=
+ dev-qt/qtopengl:4=
+ dev-qt/qt3support:4=
+ dev-qt/qtsvg:4=
+ dev-qt/qtwebkit:4=
+ dev-qt/qtxmlpatterns:4=
+ )
+ x11-libs/libXft:0=
+ )
+ afs? ( net-fs/openafs )
+ avahi? ( net-dns/avahi:0= )
+ emacs? ( virtual/emacs )
+ fits? ( sci-libs/cfitsio:0= )
+ fftw? ( sci-libs/fftw:3.0= )
+ geocad? ( <sci-libs/opencascade-6.8.0:= )
+ graphviz? ( media-gfx/graphviz:0= )
+ http? ( dev-libs/fcgi:0= )
+ kerberos? ( virtual/krb5 )
+ ldap? ( net-nds/openldap:0= )
+ math? (
+ sci-libs/gsl:0=
+ sci-mathematics/unuran:0=
+ mpi? ( virtual/mpi )
+ )
+ mysql? ( virtual/mysql )
+ odbc? ( || ( dev-db/libiodbc:0= dev-db/unixODBC:0= ) )
+ oracle? ( dev-db/oracle-instantclient-basic:0= )
+ postgres? ( dev-db/postgresql:= )
+ pythia6? ( sci-physics/pythia:6= )
+ pythia8? ( >=sci-physics/pythia-8.1.80:8= )
+ python? ( ${PYTHON_DEPS} )
+ shadow? ( virtual/shadow )
+ sqlite? ( dev-db/sqlite:3= )
+ ssl? ( dev-libs/openssl:0= )
+ xml? ( dev-libs/libxml2:2= )
+ xrootd? ( >=net-libs/xrootd-3.3.5:0= )
+"
+
+# TODO: ruby is not yet ported to ROOT-6, reenable when (if?) ready
+# ruby? (
+# dev-lang/ruby:=
+# dev-ruby/rubygems:=
+# )
+
+DEPEND="${CDEPEND}
+ virtual/pkgconfig"
+
+RDEPEND="${CDEPEND}
+ xinetd? ( sys-apps/xinetd )"
+
+PDEPEND="doc? ( ~app-doc/root-docs-${PV}[http=,math=] )"
+
+# install stuff in ${P} and not ${PF} for easier tracking in root-docs
+DOC_DIR="/usr/share/doc/${P}"
+
+OC_UNSUPPORTED="6.8.0"
+
+die_compiler() {
+ eerror "You are using a $(tc-getCXX)-$5 without C++$1 capabilities"
+ die "Need one of the following C++$1 capable compilers:\n"\
+ " >=sys-devel/gcc[cxx]-$2\n"\
+ " >=sys-devel/clang-$3\n"\
+ " >=dev-lang/icc-$4"
+}
+
+# check compiler to satisfy minimal versions
+# $1 - std version
+# $2 - g++
+# $3 - clang++
+# $4 - icc/icpc
+check_compiler() {
+ local ver
+ case "$(tc-getCXX)" in
+ *clang++*)
+ ver="$(best_version sys-devel/clang | sed 's:sys-devel/clang-::')"
+ ;;
+ *g++*)
+ ver="$(gcc-version)"
+ ;;
+ *icc*|*icpc*)
+ ver="$(best_version dev-lang/icc | sed 's:dev-lang/icc-::')"
+ eerror "ROOT-6 is known not to build with ICC."
+ eerror "Please report any isuses upstream."
+ ;;
+ *)
+ ewarn "You are using an unsupported compiler."
+ ewarn "Please report any issues upstream."
+ return 0
+ ;;
+ esac
+ version_is_at_least "$3" "${ver}" || die_compiler "$1" "$2" "$3" "$4" "${ver}"
+}
+
+pkg_setup() {
+ fortran-2_pkg_setup
+ use python && python-single-r1_pkg_setup
+ echo
+ elog "There are extra options on packages not yet in Gentoo:"
+ elog "Afdsmgrd, AliEn, castor, Chirp, dCache, gfal, Globus, gLite,"
+ elog "HDFS, Monalisa, MaxDB/SapDB, SRP."
+ elog "You can use the env variable EXTRA_ECONF variable for this."
+ elog "For example, for SRP, you would set: "
+ elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=${EROOT%/}/usr/$(get_libdir)\""
+ echo
+
+ enewgroup rootd
+ enewuser rootd -1 -1 /var/spool/rootd rootd
+
+ if use math; then
+ if use openmp; then
+ if [[ "$(tc-getCXX)" == *g++* && "$(tc-getCXX)" != *clang++* ]] && ! tc-has-openmp; then
+ ewarn "You are using a g++ without OpenMP capabilities"
+ die "Need an OpenMP capable compiler"
+ else
+ export USE_OPENMP=1 USE_PARALLEL_MINUIT2=1
+ fi
+ elif use mpi; then
+ export USE_MPI=1 USE_PARALLEL_MINUIT2=1
+ fi
+ fi
+
+ # c++11 support is mandatory
+ check_compiler "11" "4.8" "3.4" "13"
+
+ # Active version of opencascade may be >= $OC_UNSUPPORTED,
+ # so we need to eselect proper version (it must exist due to DEPEND requirement)
+ if use geocad; then
+ oc_current=$(eselect opencascade show)
+ # Proceed only if active version is unsupported
+ if version_is_at_least "${OC_UNSUPPORTED}" "${oc_current}"; then
+ local -a vlist
+ vlist=( $(version_sort $(eselect opencascade list | awk '/^ / { print $2 }')) )
+ local i
+ # search for higehr version < $OC_UNSUPPORTED
+ # list is sorted acsending, so loop backwards
+ for (( i=$(( ${#vlist[@]} -1 )); i>=0; i-- )); do
+ version_is_at_least "${OC_UNSUPPORTED}" "${vlist[i]}" || break
+ done
+ [[ $i == "-1" ]] && die "No suitable opencascade eselect slot is available (<${OC_UNSUPPORTED})"
+
+ einfo "Switching opencascade to supported slot: ${oc_current} -> ${vlist[i]}"
+ eselect opencascade set ${vlist[i]} > /dev/null || die "eselect opencascade set ${vlist[i]} failed!"
+ else
+ # forget it, effectively disabling eselect cleanup
+ unset oc_current
+ fi
+ fi
+}
+
+src_prepare() {
+ # Second version of makepch is required in order to generate
+ # PCH file appropriate for Gentoo include headers layout.
+ # This can be done only at install stage, when files are placed
+ # as appropriate. Premature modification of makepch.sh will
+ # broke build process, however.
+ #cp "etc/dictpch/makepch.sh" "etc/dictpch/makepch-gentoo.sh" || die
+
+ epatch \
+ "${FILESDIR}"/${PN}-5.28.00b-glibc212.patch \
+ "${FILESDIR}"/${PN}-5.32.00-afs.patch \
+ "${FILESDIR}"/${PN}-5.32.00-cfitsio.patch \
+ "${FILESDIR}"/${PN}-5.32.00-chklib64.patch \
+ "${FILESDIR}"/${PN}-5.34.13-desktop.patch \
+ "${FILESDIR}"/${PN}-5.34.13-unuran.patch \
+ "${FILESDIR}"/${PN}-6.00.01-dotfont.patch \
+ "${FILESDIR}"/${PN}-6.00.01-geocad.patch \
+ "${FILESDIR}"/${PN}-6.00.01-llvm.patch \
+ "${FILESDIR}"/${PN}-6.00.01-nobyte-compile.patch \
+ "${FILESDIR}"/${PN}-6.00.01-prop-flags.patch \
+ "${FILESDIR}"/${PN}-6.02.05-xrootd4.patch
+ #"${FILESDIR}"/${PN}-6.02.05-dictpch.patch \
+
+ # make sure we use system libs and headers
+ rm montecarlo/eg/inc/cfortran.h README/cfortran.doc || die
+ rm -r graf2d/asimage/src/libAfterImage || die
+ rm -r graf3d/ftgl/{inc,src} || die
+ rm -r graf2d/freetype/src || die
+ rm -r graf3d/glew/{inc,src} || die
+ rm -r core/pcre/src || die
+ rm -r math/unuran/src/unuran-*.tar.gz || die
+ LANG=C LC_ALL=C find core/zip -type f -name "[a-z]*" -print0 | \
+ xargs -0 rm || die
+ rm -r core/lzma/src/*.tar.gz || die
+ rm graf3d/gl/{inc,src}/gl2ps.* || die
+ sed -i -e 's/^GLLIBS *:= .* $(OPENGLLIB)/& -lgl2ps/' \
+ graf3d/gl/Module.mk || die
+
+ # In Gentoo, libPythia6 is called libpythia6
+ # iodbc is in /usr/include/iodbc
+ # pg_config.h is checked instead of libpq-fe.h
+ sed -i \
+ -e 's:libPythia6:libpythia6:g' \
+ -e 's:$ODBCINCDIR:$ODBCINCDIR /usr/include/iodbc:' \
+ -e 's:libpq-fe.h:pg_config.h:' \
+ configure || die "adjusting configure for Gentoo failed"
+
+ # prefixify the configure script
+ sed -i \
+ -e 's:/usr:${EPREFIX}/usr:g' \
+ configure || die "prefixify configure failed"
+
+ # CSS should use local images
+ sed -i -e 's,http://.*/,,' etc/html/ROOT.css || die "html sed failed"
+
+ # QTDIR only used for qt3 in gentoo, and configure looks for it.
+ unset QTDIR
+}
+
+# NB: ROOT uses bundled LLVM, because it is patched and API-incompatible with
+# system LLVM.
+# NB: As of 6.00.0.1 cmake is not ready as it can't fully replace configure,
+# e.g. for afs and geocad.
+
+src_configure() {
+ local -a myconf
+ # Some compilers need special care
+ case "$(tc-getCXX)" in
+ *clang++*)
+ myconf=(
+ --with-clang
+ --with-f77="$(tc-getFC)"
+ )
+ ;;
+ *icc*|*icpc*)
+ # For icc we need to provide architecture manually
+ # and not to tamper with tc-get*
+ use x86 && myconf=( linuxicc )
+ use amd64 && myconf=( linuxx8664icc )
+ ;;
+ *) # gcc goes here too
+ myconf=(
+ --with-cc="$(tc-getCC)"
+ --with-cxx="$(tc-getCXX)"
+ --with-f77="$(tc-getFC)"
+ --with-ld="$(tc-getCXX)"
+ )
+ ;;
+ esac
+
+ # the configure script is not the standard autotools
+ myconf+=(
+ --prefix="${EPREFIX}/usr"
+ --etcdir="${EPREFIX}/etc/root"
+ --libdir="${EPREFIX}/usr/$(get_libdir)/${PN}"
+ --docdir="${EPREFIX}${DOC_DIR}"
+ --tutdir="${EPREFIX}${DOC_DIR}/examples/tutorials"
+ --testdir="${EPREFIX}${DOC_DIR}/examples/tests"
+ --disable-builtin-afterimage
+ --disable-builtin-ftgl
+ --disable-builtin-freetype
+ --disable-builtin-glew
+ --disable-builtin-lzma
+ --disable-builtin-pcre
+ --disable-builtin-zlib
+ --disable-werror
+ --enable-explicitlink
+ --enable-shared
+ --enable-soversion
+ --fail-on-missing
+ --nohowto
+ --with-afs-shared=yes
+ --with-sys-iconpath="${EPREFIX}/usr/share/pixmaps"
+ $(use_enable X x11)
+ $(use_enable X asimage)
+ $(use_enable X xft)
+ $(use_enable afs)
+ $(use_enable avahi bonjour)
+ $(use_enable fits fitsio)
+ $(use_enable fftw fftw3)
+ $(use_enable gdml)
+ $(use_enable geocad)
+ $(use_enable graphviz gviz)
+ $(use_enable http)
+ $(use_enable kerberos krb5)
+ $(use_enable ldap)
+ $(use_enable math genvector)
+ $(use_enable math gsl-shared)
+ $(use_enable math mathmore)
+ $(use_enable math minuit2)
+ $(use_enable math roofit)
+ $(use_enable math tmva)
+ $(use_enable math vc)
+ $(use_enable math vdt)
+ $(use_enable math unuran)
+ $(use_enable memstat)
+ $(use_enable mysql)
+ $(usex mysql "--with-mysql-incdir=${EPREFIX}/usr/include/mysql" "")
+ $(use_enable odbc)
+ $(use_enable opengl)
+ $(use_enable oracle)
+ $(use_enable postgres pgsql)
+ $(use_enable prefix rpath)
+ $(use_enable pythia6)
+ $(use_enable pythia8)
+ $(use_enable python)
+ $(use_enable qt4 qt)
+ $(use_enable qt4 qtgsi)
+ $(use_enable shadow shadowpw)
+ $(use_enable sqlite)
+ $(use_enable ssl)
+ $(use_enable table)
+ $(use_enable tiff astiff)
+ $(use_enable xml)
+ $(use_enable xrootd)
+ ${EXTRA_ECONF}
+ )
+
+ # usex can't be used here, because pg_config may be not
+ # installed with USE="-postgres"
+ use postgres && myconf+=( --with-pgsql-incdir=$(pg_config --includedir) )
+
+ ./configure ${myconf[@]} || die "configure failed"
+}
+
+src_compile() {
+ emake \
+ OPT="${CXXFLAGS}" \
+ F77OPT="${FFLAGS}" \
+ ROOTSYS="${S}" \
+ LD_LIBRARY_PATH="${S}/lib"
+ use emacs && elisp-compile build/misc/*.el
+}
+
+daemon_install() {
+ local daemons="rootd proofd"
+ dodir /var/spool/rootd
+ fowners rootd:rootd /var/spool/rootd
+ dodir /var/spool/rootd/{pub,tmp}
+ fperms 1777 /var/spool/rootd/{pub,tmp}
+
+ local i
+ for i in ${daemons}; do
+ newinitd "${FILESDIR}"/${i}.initd ${i}
+ newconfd "${FILESDIR}"/${i}.confd ${i}
+ done
+ if use xinetd; then
+ insinto /etc/xinetd
+ doins "${S}"/etc/daemons/{rootd,proofd}.xinetd
+ fi
+}
+
+desktop_install() {
+ cd "${S}"
+ echo "Icon=root-system-bin" >> etc/root.desktop
+ domenu etc/root.desktop
+ doicon build/package/debian/root-system-bin.png
+
+ insinto /usr/share/icons/hicolor/48x48/mimetypes
+ doins build/package/debian/application-x-root.png
+
+ insinto /usr/share/icons/hicolor/48x48/apps
+ doicon build/package/debian/root-system-bin.xpm
+}
+
+cleanup_install() {
+ # Cleanup of files either already distributed or unused on Gentoo
+ pushd "${ED}" > /dev/null
+ rm usr/share/root/fonts/LICENSE || die
+ rm etc/root/proof/*.sample || die
+ rm -r etc/root/daemons || die
+ # these should be in PATH
+ mv etc/root/proof/utils/pq2/pq2* usr/bin/ || die
+ rm ${DOC_DIR#/}/{INSTALL,LICENSE} || die
+ use examples || rm -r ${DOC_DIR#/}/examples || die
+
+ # clean hardcoded sandbox paths
+ #rm etc/root/dictpch/allCppflags.txt.tmp || die
+ #sed -i "s|${S}/||" etc/root/cling/llvm/Config/llvm-config.h || die
+ # regenerate pch for Gentoo headers layout
+ #rm "etc/root/allDict.cxx.pch" || die
+ #sed -i 's|etc/dictpch|etc/root/dictpch|' etc/root/dictpch/allLinkDefs.h || die
+ #sed -i 's|etc/cling|etc/root/cling|' etc/root/dictpch/allHeaders.h || die
+ #sed -i "s|ROOTDIR_TEMPLATE|${ED}|" etc/root/dictpch/makepch-gentoo.sh || die
+ #etc/root/dictpch/makepch-gentoo.sh etc/root/allDict.cxx.pch || die "PCH generation failed"
+}
+
+src_install() {
+ ROOTSYS="${S}" emake DESTDIR="${D}" install
+ insinto "${DOC_DIR}"
+ doins README.md
+
+ echo "LDPATH=${EPREFIX%/}/usr/$(get_libdir)/root" > 99root
+ use pythia8 && echo "PYTHIA8=${EPREFIX%/}/usr" >> 99root
+
+ if use python; then
+ echo "PYTHONPATH=${EPREFIX%/}/usr/$(get_libdir)/root" >> 99root
+ python_optimize "${D}/usr/$(get_libdir)/root"
+ fi
+ use emacs && elisp-install ${PN} build/misc/*.{el,elc}
+ if use examples; then
+ # these should really be taken care of by the root make install
+ insinto ${DOC_DIR}/examples/tutorials/tmva
+ doins -r tmva/test
+ fi
+ doenvd 99root
+
+ # The build system installs Emacs support unconditionally in the wrong
+ # directory. Remove it and call elisp-install in case of USE=emacs.
+ rm -r "${ED}"/usr/share/emacs || die
+
+ daemon_install
+ desktop_install
+ cleanup_install
+
+ # do not copress files used by ROOT's CLI (.credit, .demo, .license)
+ docompress -x "${DOC_DIR}"/{CREDITS,examples/tutorials}
+ # needed for .license command to work
+ dosym "${ED}"usr/portage/licenses/LGPL-2.1 "${DOC_DIR}/LICENSE"
+}
+
+pkg_postinst() {
+ fdo-mime_desktop_database_update
+
+ # restort opencascade eselect slot
+ if use geocad && [[ -n ${oc_current} ]]; then
+ einfo "Switching to user set slot: $(eselect opencascade show) -> ${oc_current}"
+ eselect opencascade set ${oc_current} > /dev/null || eerror "eselect opencascade set ${vlist[i]} failed!"
+ unset oc_current
+ fi
+}
+
+pkg_postrm() {
+ fdo-mime_desktop_database_update
+}