diff options
| -rw-r--r-- | profiles/package.mask | 6 | ||||
| -rw-r--r-- | sci-chemistry/votca-csg/Manifest | 5 | ||||
| -rw-r--r-- | sci-chemistry/votca-csg/metadata.xml | 19 | ||||
| -rw-r--r-- | sci-chemistry/votca-csg/votca-csg-1.6.4.ebuild | 91 | ||||
| -rw-r--r-- | sci-chemistry/votca-csg/votca-csg-2021.2.ebuild | 87 |
5 files changed, 0 insertions, 208 deletions
diff --git a/profiles/package.mask b/profiles/package.mask index 994f3989e1dc..9af4c47d43ee 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -802,12 +802,6 @@ dev-python/PyUtilib dev-python/socketio-client dev-python/www-authenticate -# Michał Górny <mgorny@gentoo.org> (2022-12-23) -# sci-libs/votca-tools fail to build with GCC 12. Pending version bump -# since January 2022. -# Removal on 2023-01-22. Bug #841830. -sci-chemistry/votca-csg - # Georgy Yakovlev <gyakovlev@gentoo.org> (2022-12-19) # This version currently is not compatible with kernel build (yet) ~dev-util/bindgen-0.63.0 diff --git a/sci-chemistry/votca-csg/Manifest b/sci-chemistry/votca-csg/Manifest deleted file mode 100644 index 07e612210878..000000000000 --- a/sci-chemistry/votca-csg/Manifest +++ /dev/null @@ -1,5 +0,0 @@ -DIST votca-csg-1.6.4.tar.gz 537966 BLAKE2B c9ccc3aa28bdc4a2a2c080104b70602d8cf4be19a71e7d0b4a1c03d11f54b645984103d1662823a9308a4e4c4baedef731de06ff314b168f89e7326c0d3c8ee9 SHA512 4cdbf6c0a593720675f48f574ff9a93d038a48037543c1e09a4559d3eb262a2d8bf83d5f5dab85b4820a541e0c57f7cca78315d5b3382763e8acd8cc0fcb65ac -DIST votca-csg-2021.2.tar.gz 4300675 BLAKE2B 8db666e77bc7d6d8da34fed97b0466e5296019aa703f324d46531992c0af544c31b2e3e4595883791cef7acd6d2d52eff8edc7eeedecaae0eb9e0cbf334748ab SHA512 5808edd96199cad6e5fc803a0e489f3d2f376da3d64f565536cc37561a0fcd22960563af7d3f86522bcc7336c8d6f7c7f6501b36feb960aae5168904156bfbf6 -DIST votca-csg-manual-1.6.4.pdf 1242124 BLAKE2B 003a255d2869c8185f9e03038f646a80b682be3daceb18757c791f5d52101379402aee20c5dcb65ef8ce651bd6f6590ad5249e835e53ce92e04eb33214017a9e SHA512 36956acd24a21cb0a1dd26d6640b41b7473132948327c05856191b4f9531b4d1d5f98be68a9d1a847935d47633d483e87c2300634233a6e617a010c1fb563690 -DIST votca-csg-tutorials-1.6.4.tar.gz 5944389 BLAKE2B 66f1d4947bb28ec602250226ad2c08cc02278a90776acbcadca2df3078361435fb2353ee0fa299d0d19697d36682f20aab709d45539d5ac7e7070942601ebc3f SHA512 7e40037f2e70c861fd7f5c63806c17ad56672a340a8795fa745414940c55f593bef32b9f6b9050400131ed9e66aa927149e9d324a1c264364d8504baf1921e28 -DIST votca-csg-tutorials-2021.2.tar.gz 5942042 BLAKE2B a03627406a3b56ebf978dc82629e1f0950bfbb121a0f6c7fd60341986efe4892ba8bf1e6b526e6df2df5fb81351177ad97816568521b9dc6a91e72d6853c1e62 SHA512 3ddeb3e57353e6d4e59163ee1303b39d4e3b623309875f280bf8c02dde76d0615b32a27ea960a301b61b81034a538df87dfe97a53dfdd0c81f52629eadd64f1f diff --git a/sci-chemistry/votca-csg/metadata.xml b/sci-chemistry/votca-csg/metadata.xml deleted file mode 100644 index e20cfda723ef..000000000000 --- a/sci-chemistry/votca-csg/metadata.xml +++ /dev/null @@ -1,19 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="person"> - <email>junghans@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <use> - <flag name="gromacs">Add support for gromacs file formats through <pkg>sci-chemistry/gromacs</pkg></flag> - <flag name="extras">Pull in extra applications from <pkg>sci-chemistry/votca-csgapps</pkg></flag> - </use> - <upstream> - <remote-id type="github">votca/csg</remote-id> - </upstream> -</pkgmetadata> diff --git a/sci-chemistry/votca-csg/votca-csg-1.6.4.ebuild b/sci-chemistry/votca-csg/votca-csg-1.6.4.ebuild deleted file mode 100644 index 5630d124ef7d..000000000000 --- a/sci-chemistry/votca-csg/votca-csg-1.6.4.ebuild +++ /dev/null @@ -1,91 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit bash-completion-r1 cmake - -if [[ ${PV} == *9999 ]]; then - inherit git-r3 - EGIT_REPO_URI="https://github.com/${PN/-//}.git" - PDEPEND="${PDEPEND} doc? ( ~app-doc/${PN}-manual-${PV} )" -else - SRC_URI="https://github.com/${PN/-//}/archive/v${PV}.tar.gz -> ${P}.tar.gz - doc? ( https://github.com/${PN/-//}-manual/releases/download/v${PV}/${PN}-manual-${PV}.pdf ) - examples? ( https://github.com/${PN/-//}-tutorials/archive/v${PV}.tar.gz -> ${PN}-tutorials-${PV}.tar.gz )" - KEYWORDS="amd64 x86 ~amd64-linux" - S="${WORKDIR}/${P#votca-}" - PDEPEND="extras? ( ~sci-chemistry/${PN}apps-${PV} )" -fi - -DESCRIPTION="Votca coarse-graining engine" -HOMEPAGE="https://www.votca.org/" - -LICENSE="Apache-2.0" -SLOT="0" -IUSE="doc examples extras +gromacs hdf5" - -RDEPEND=" - app-shells/bash:* - >=dev-cpp/eigen-3.3 - dev-lang/perl - ~sci-libs/votca-tools-${PV} - gromacs? ( sci-chemistry/gromacs:=[gmxapi-legacy(+)] ) - hdf5? ( sci-libs/hdf5 ) -" -DEPEND="${RDEPEND}" -BDEPEND=" - >=app-text/txt2tags-2.5 - virtual/pkgconfig -" - -DOCS=( README.md NOTICE CHANGELOG.md ) - -src_unpack() { - if [[ ${PV} == *9999 ]]; then - git-r3_src_unpack - if use examples; then - EGIT_REPO_URI="https://github.com/${PN/-//}-tutorials.git" - EGIT_BRANCH="master" - EGIT_CHECKOUT_DIR="${WORKDIR}/${PN#votca-}-tutorials" \ - git-r3_src_unpack - fi - else - default - fi -} - -src_configure() { - local mycmakeargs=( - -DWITH_GMX=$(usex gromacs) - -DCMAKE_DISABLE_FIND_PACKAGE_HDF5=$(usex !hdf5) - -DWITH_RC_FILES=OFF - ) - cmake_src_configure -} - -src_install() { - cmake_src_install - newbashcomp "${ED}"/usr/share/votca/rc/csg-completion.bash csg_call - for i in "${ED}"/usr/bin/csg_*; do - [[ ${i} = *csg_call ]] && continue - bashcomp_alias csg_call "${i##*/}" - done - if use doc; then - [[ ${PV} != *9999* ]] && dodoc "${DISTDIR}/${PN}-manual-${PV}.pdf" - fi - if use examples; then - insinto "/usr/share/doc/${PF}/tutorials" - docompress -x "/usr/share/doc/${PF}/tutorials" - rm -rf "${WORKDIR}/${PN#votca-}"-tutorials*/CMake* - doins -r "${WORKDIR}/${PN#votca-}"-tutorials*/* - fi -} - -pkg_postinst() { - einfo - einfo "Please read and cite:" - einfo "VOTCA, J. Chem. Theory Comput. 5, 3211 (2009). " - einfo "https://dx.doi.org/10.1021/ct900369w" - einfo -} diff --git a/sci-chemistry/votca-csg/votca-csg-2021.2.ebuild b/sci-chemistry/votca-csg/votca-csg-2021.2.ebuild deleted file mode 100644 index 8cd79831d9cc..000000000000 --- a/sci-chemistry/votca-csg/votca-csg-2021.2.ebuild +++ /dev/null @@ -1,87 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit bash-completion-r1 cmake - -if [[ ${PV} == *9999 ]]; then - inherit git-r3 - EGIT_REPO_URI="https://github.com/${PN/-//}.git" -else - SRC_URI="https://github.com/${PN/-//}/archive/v${PV}.tar.gz -> ${P}.tar.gz - examples? ( https://github.com/${PN/-//}-tutorials/archive/v${PV}.tar.gz -> ${PN}-tutorials-${PV}.tar.gz )" - KEYWORDS="~amd64 ~x86 ~amd64-linux" - S="${WORKDIR}/${P#votca-}" -fi - -DESCRIPTION="Votca coarse-graining engine" -HOMEPAGE="https://www.votca.org/" - -LICENSE="Apache-2.0" -SLOT="0" -IUSE="examples extras +gromacs hdf5 test" -RESTRICT="!test? ( test )" - -RDEPEND=" - app-shells/bash:* - >=dev-cpp/eigen-3.3 - dev-lang/perl - ~sci-libs/votca-tools-${PV} - gromacs? ( sci-chemistry/gromacs:=[gmxapi-legacy(+)] ) - hdf5? ( sci-libs/hdf5 ) -" -DEPEND="${RDEPEND}" -BDEPEND=" - >=app-text/txt2tags-2.5 - virtual/pkgconfig -" - -DOCS=( README.rst NOTICE.rst CHANGELOG.rst ) - -src_unpack() { - if [[ ${PV} == *9999 ]]; then - git-r3_src_unpack - if use examples; then - EGIT_REPO_URI="https://github.com/${PN/-//}-tutorials.git" - EGIT_BRANCH="master" - EGIT_CHECKOUT_DIR="${WORKDIR}/${PN#votca-}-tutorials" \ - git-r3_src_unpack - fi - else - default - fi -} - -src_configure() { - local mycmakeargs=( - -DCMAKE_DISABLE_FIND_PACKAGE_GROMACS=$(usex !gromacs) - -DCMAKE_DISABLE_FIND_PACKAGE_HDF5=$(usex !hdf5) - -DBUILD_CSGAPPS=$(usex extras) - -DENABLE_TESTING=$(usex test) - ) - cmake_src_configure -} - -src_install() { - cmake_src_install - newbashcomp "${ED}"/usr/share/votca/rc/csg-completion.bash csg_call - for i in "${ED}"/usr/bin/csg_*; do - [[ ${i} = *csg_call ]] && continue - bashcomp_alias csg_call "${i##*/}" - done - if use examples; then - insinto "/usr/share/doc/${PF}/tutorials" - docompress -x "/usr/share/doc/${PF}/tutorials" - rm -rf "${WORKDIR}/${PN#votca-}"-tutorials*/CMake* - doins -r "${WORKDIR}/${PN#votca-}"-tutorials*/* - fi -} - -pkg_postinst() { - einfo - einfo "Please read and cite:" - einfo "VOTCA, J. Chem. Theory Comput. 5, 3211 (2009). " - einfo "https://dx.doi.org/10.1021/ct900369w" - einfo -} |