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path: root/sci-biology/pysam
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* sci-biology/pysam: fix build with cython 3David Seifert2023-04-082-0/+30
| | | | | Closes: https://bugs.gentoo.org/898730 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-biology/pysam: drop 0.20.0David Seifert2023-04-062-70/+0
| | | | | Closes: https://bugs.gentoo.org/836857 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-biology/pysam: add 0.21.0David Seifert2023-04-062-0/+67
| | | | | Bug: https://bugs.gentoo.org/836857 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-biology/pysam: add 9999David Seifert2023-03-301-0/+72
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-biology/pysam: drop 0.19.1David Seifert2023-02-192-67/+0
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-biology/pysam: add 0.20.0David Seifert2023-02-192-0/+70
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* */*: remove py3.8 from PYTHON_COMPATDavid Seifert2023-01-141-2/+2
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-biology/pysam: enable py3.11David Seifert2022-06-191-1/+1
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-biology/pysam: drop 0.17.0David Seifert2022-06-192-67/+0
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-biology/pysam: add 0.19.1David Seifert2022-06-102-0/+67
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-biology/pysam: drop 0.16.0.1-r1David Seifert2021-10-113-98/+0
| | | | | Closes: https://bugs.gentoo.org/812242 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-biology/pysam: block <setuptools-58 for 0.16.0.1Arthur Zamarin2021-10-091-4/+4
| | | | | | | Was fixed for 0.17.0 Bug: https://bugs.gentoo.org/812242 Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-biology/pysam: add 0.17.0David Seifert2021-10-032-0/+67
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* **/metadata.xml: Replace http by https in DOCTYPE elementUlrich Müller2021-09-111-1/+1
| | | | | Bug: https://bugs.gentoo.org/552720 Signed-off-by: Ulrich Müller <ulm@gentoo.org>
* */*: Remove obsolete values from PYTHON_COMPATMichał Górny2021-01-311-1/+1
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* */*: Update pypi (and github) remote-ids from HOMEPAGEMichał Górny2020-12-111-9/+10
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-biology/pysam: Remove oldDavid Seifert2020-08-033-111/+0
| | | | | | | | Closes: https://bugs.gentoo.org/645060 Closes: https://bugs.gentoo.org/646986 Closes: https://bugs.gentoo.org/718472 Package-Manager: Portage-3.0.1, Repoman-2.3.23 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-biology/pysam: Bump to 0.16.0.1David Seifert2020-08-033-0/+98
| | | | | | | | Bug: https://bugs.gentoo.org/645060 Bug: https://bugs.gentoo.org/646986 Bug: https://bugs.gentoo.org/718472 Package-Manager: Portage-3.0.1, Repoman-2.3.23 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-biology/pysam: Remove py2Michał Górny2020-02-111-1/+1
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* */*: Clean PYTHON_COMPAT of obsolete implsMichał Górny2020-01-051-2/+2
| | | | | Closes: https://github.com/gentoo/gentoo/pull/14246 Signed-off-by: Michał Górny <mgorny@gentoo.org>
* */*: Remove python3_4 PYTHON_COMPAT correctlyMichał Górny2019-04-171-2/+2
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* update pypi HOMEPAGE to avoid redirectionMichael Mair-Keimberger2018-04-261-1/+1
| | | | Closes: https://github.com/gentoo/gentoo/pull/8080
* Replace pypi.python.org with pypi.org in HOMEPAGEMike Gilbert2018-04-191-1/+1
| | | | Bug: https://bugs.gentoo.org/653540
* sci-biology/*: Update Manifest hashesMichał Górny2017-12-101-1/+1
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* sci-biology/pysam: Remove oldDavid Seifert2017-09-172-48/+0
| | | | Package-Manager: Portage-2.3.8, Repoman-2.3.3
* sci-biology/pysam: Version bump to 0.12.0.1David Seifert2017-09-172-0/+48
| | | | Package-Manager: Portage-2.3.8, Repoman-2.3.3
* sci-biology/pysam: Fix broken relative -IDavid Seifert2017-09-022-1/+68
| | | | | Bug: https://bugs.gentoo.org/show_bug.cgi?id=629670 Package-Manager: Portage-2.3.8, Repoman-2.3.3
* sci-biology/pysam: Remove oldDavid Seifert2017-09-023-86/+0
| | | | | Package-Manager: Portage-2.3.8, Repoman-2.3.3 Closes: https://github.com/gentoo/gentoo/pull/5593
* sci-biology/pysam: Bump to 0.12David Seifert2017-09-022-0/+44
| | | | Package-Manager: Portage-2.3.8, Repoman-2.3.3
* Globally add missing remote ID references to metadata.xmlJustin Lecher2017-04-291-1/+2
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop $Id$ per council decision in bug #611234.Robin H. Johnson2017-02-281-1/+0
| | | | Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
* sci-biology/pysam: Remove oldDavid Seifert2016-04-102-26/+0
| | | | Package-Manager: portage-2.2.28
* sci-biology/pysam: Version bump, add py3 supportDavid Seifert2016-04-103-0/+87
| | | | Package-Manager: portage-2.2.28
* Set appropriate maintainer types in metadata.xml (GLEP 67)Michał Górny2016-01-241-1/+1
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* Replace all herds with appropriate projects (GLEP 67)Michał Górny2016-01-241-1/+4
| | | | | Replace all uses of herd with appropriate project maintainers, or no maintainers in case of herds requested to be disbanded.
* Revert DOCTYPE SYSTEM https changes in metadata.xmlMike Gilbert2015-08-241-1/+1
| | | | | | | repoman does not yet accept the https version. This partially reverts eaaface92ee81f30a6ac66fe7acbcc42c00dc450. Bug: https://bugs.gentoo.org/552720
* Convert URIs for googlecode.com to httpsJustin Lecher2015-08-241-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Enable https for all google URIsJustin Lecher2015-08-241-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Use https by defaultJustin Lecher2015-08-241-1/+1
| | | | | | Convert all URLs for sites supporting encrypted connections from http to https Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Use https by defaultJustin Lecher2015-08-241-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* proj/gentoo: Initial commitRobin H. Johnson2015-08-083-0/+34
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed