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# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=5
PYTHON_COMPAT=( python2_7 )
inherit multilib python-r1 eutils versionator java-utils-2
MY_PV="$(replace_all_version_separators _)"
MY_P="Caver${MY_PV}_pymol_plugin"
DESCRIPTION="Calculation of pathways of proteins from buried cavities to outside solvent"
HOMEPAGE="http://loschmidt.chemi.muni.cz/caver/"
SRC_URI="${MY_P}.zip"
LICENSE="CAVER"
SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE=""
REQUIRED_USE="${PYTHON_REQUIRED_USE}"
RDEPEND="
>=virtual/jre-1.6
sci-chemistry/pymol[${PYTHON_USEDEP}]
${PYTHON_DEPS}"
DEPEND="app-arch/unzip
${PYTHON_DEPS}"
RESTRICT="fetch"
S="${WORKDIR}/${MY_P}"/linux_mac
pkg_nofetch() {
elog "Download ${A}"
elog "from ${HOMEPAGE}. This requires registration."
elog "Place tarballs in ${DISTDIR}."
}
src_install() {
java-pkg_dojar Caver${MY_PV}/*.jar
java-pkg_jarinto /usr/share/${PN}/lib/lib/
java-pkg_dojar Caver${MY_PV}/lib/*.jar
installation() {
sed \
-e "s:directory/where/jar/with/plugin/is/located:${EPREFIX}/usr/share/${PN}/lib/:g" \
-i Caver${MY_PV}.py || die
python_moduleinto pmg_tk/startup/
python_domodule Caver${MY_PV}.py
python_optimize
}
python_foreach_impl installation
}
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