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authorAndrey Kislyuk <weaver@gentoo.org>2011-01-27 16:23:34 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2011-01-27 16:23:34 +0000
commit672bed5dfb2d90261730dbe6f4b29dc52a5b6b71 (patch)
treea7157d7904e39312fc9507920f3b3346e470c565 /sci-biology
parentversion bump; cleanup old revisions (diff)
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Drop ~x86, avoid collision with sci-biology/vaal
Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/allpathslg/ChangeLog8
-rw-r--r--sci-biology/allpathslg/Manifest4
-rw-r--r--sci-biology/allpathslg/allpathslg-35725-r1.ebuild (renamed from sci-biology/allpathslg/allpathslg-35725.ebuild)11
3 files changed, 17 insertions, 6 deletions
diff --git a/sci-biology/allpathslg/ChangeLog b/sci-biology/allpathslg/ChangeLog
index fa2d95732699..efa135b0eab4 100644
--- a/sci-biology/allpathslg/ChangeLog
+++ b/sci-biology/allpathslg/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for sci-biology/allpathslg
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.1 2011/01/25 16:51:48 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.2 2011/01/27 16:23:34 weaver Exp $
+
+*allpathslg-35725-r1 (27 Jan 2011)
+
+ 27 Jan 2011; Andrey Kislyuk <weaver@gentoo.org> -allpathslg-35725.ebuild,
+ +allpathslg-35725-r1.ebuild:
+ Drop ~x86, avoid collision with sci-biology/vaal
*allpathslg-35725 (25 Jan 2011)
diff --git a/sci-biology/allpathslg/Manifest b/sci-biology/allpathslg/Manifest
index 33ab9aaba38e..e5d420c3dab3 100644
--- a/sci-biology/allpathslg/Manifest
+++ b/sci-biology/allpathslg/Manifest
@@ -1,4 +1,4 @@
DIST allpathslg-35725.tar.gz 2375961 RMD160 b65870041b6b96b81194cf1b9f820c523be29121 SHA1 2a10c88dc2c313a7307a584495195c40640989f8 SHA256 992089f300ea6ae298036f0636a21e4475ac8961927f59c4b78bb2efc2c068ac
-EBUILD allpathslg-35725.ebuild 683 RMD160 c78fea49862a672ef68784a245b8c2b6647ec0ac SHA1 efcc04a1e5b569aae0162993ed8d308419509770 SHA256 1242c8c4efb2cd5885b870fd157902978a9c693bca4b468b8f113fe3b121b280
-MISC ChangeLog 402 RMD160 9f271fd4dc8dd12b552423b2c84beb1f6dad5847 SHA1 ed78e205143605437c2301370883b9f90e445cea SHA256 c5a5549633352d94ff84e6bdb400495da7410eb905f670c94697cd7919e16cae
+EBUILD allpathslg-35725-r1.ebuild 854 RMD160 d654f8c5d2df58883552dae42c16b97f7a056a29 SHA1 1d3f4abaf5bff7afe90d8055b6a27f5e5bf58a3d SHA256 02a9ff15e8357640d58cb1c784ede41a710f67393bae4a5beba02720fdd5ea28
+MISC ChangeLog 597 RMD160 3c6e65bb020f49092a5196d9617b05b403bbc5bc SHA1 bbd44bb38a751a761fa2f94eaace1b1cf3cbbc6c SHA256 80c35e0cd111fd2c1eef66d1ed5b7fc72e0caf944dffa837d2a07e6a26e3ecd9
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
diff --git a/sci-biology/allpathslg/allpathslg-35725.ebuild b/sci-biology/allpathslg/allpathslg-35725-r1.ebuild
index bb15b1247914..e0d302533393 100644
--- a/sci-biology/allpathslg/allpathslg-35725.ebuild
+++ b/sci-biology/allpathslg/allpathslg-35725-r1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-35725.ebuild,v 1.1 2011/01/25 16:51:48 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-35725-r1.ebuild,v 1.1 2011/01/27 16:23:34 weaver Exp $
EAPI="2"
@@ -13,10 +13,11 @@ SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_
LICENSE="as-is"
SLOT="0"
IUSE=""
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64"
DEPEND="dev-libs/boost
- >=sys-devel/gcc-4.3.3"
+ >=sys-devel/gcc-4.3.3
+ sci-biology/vaal"
RDEPEND=""
src_prepare() {
@@ -25,4 +26,8 @@ src_prepare() {
src_install() {
einstall || die
+ # Provided by sci-biology/vaal
+ for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do
+ rm "${D}/usr/bin/$i" || die
+ done
}