| Commit message (Expand) | Author | Age | Files | Lines |
* | sci-biology/pysam: drop 0.21.0 | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-05-24 | 3 | -97/+0 |
* | sci-biology/pysam: add 0.22.1 | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-05-24 | 2 | -0/+69 |
* | sci-biology/bcftools: add 1.20 | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-05-24 | 2 | -0/+43 |
* | sci-biology/samtools: add 1.20 | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-05-24 | 2 | -0/+48 |
* | sci-biology/samtools: drop 1.17 | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-05-24 | 2 | -48/+0 |
* | sci-biology/bcftools: drop 1.17 | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-05-24 | 2 | -43/+0 |
* | sci-biology/raxml: drop 7.2.6 | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-05-24 | 3 | -67/+0 |
* | sci-biology/raxml: add 8.2.13 | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-05-24 | 4 | -4/+83 |
* | sci-biology/hmmer: Add missing include into configure | ![](//www.gravatar.com/avatar/70ed18649ead5aba74f877cfde56114f?s=13&d=retro) NHOrus | 2024-05-09 | 2 | -1/+20 |
* | sci-biology/paml: restore ~x86 | ![](//www.gravatar.com/avatar/786f3a957bcc3a8d19160e824fc64b8e?s=13&d=retro) Sam James | 2024-05-08 | 1 | -1/+1 |
* | sci-biology/paml: respect CC, CPPFLAGS, LDFLAGS | ![](//www.gravatar.com/avatar/786f3a957bcc3a8d19160e824fc64b8e?s=13&d=retro) Sam James | 2024-05-08 | 2 | -4/+64 |
* | sci-biology/paml: add 4.10.7 | ![](//www.gravatar.com/avatar/70ed18649ead5aba74f877cfde56114f?s=13&d=retro) NHOrus | 2024-05-08 | 3 | -0/+41 |
* | sci-biology/velvet: fixup whitespace & openmp check | ![](//www.gravatar.com/avatar/786f3a957bcc3a8d19160e824fc64b8e?s=13&d=retro) Sam James | 2024-05-08 | 1 | -9/+18 |
* | sci-biology/velvet: scrub patch, add bug ref | ![](//www.gravatar.com/avatar/786f3a957bcc3a8d19160e824fc64b8e?s=13&d=retro) Sam James | 2024-05-08 | 1 | -2/+1 |
* | sci-biology/velvet: Fix incompatible pointer types in 1.2.10 | ![](//www.gravatar.com/avatar/70ed18649ead5aba74f877cfde56114f?s=13&d=retro) NHOrus | 2024-05-08 | 2 | -2/+38 |
* | */*: inline mirror://sourceforge | ![](//www.gravatar.com/avatar/6518be0cea655b449a0c487ceda861ad?s=13&d=retro) Lucio Sauer | 2024-04-30 | 10 | -21/+21 |
* | sci-biology/maq: Fix assignment to incompatible pointer type | ![](//www.gravatar.com/avatar/dd68d32906759d3c241d8f3ebb75a5a6?s=13&d=retro) Brahmajit Das | 2024-04-27 | 2 | -2/+26 |
* | sci-biology/maqview: Fix passing of incompatible pointer type | ![](//www.gravatar.com/avatar/dd68d32906759d3c241d8f3ebb75a5a6?s=13&d=retro) Brahmajit Das | 2024-04-27 | 2 | -2/+15 |
* | sci-biology/HTSeq: treeclean | ![](//www.gravatar.com/avatar/7c3755d199857c933a5213fe17c3e9db?s=13&d=retro) Arthur Zamarin | 2024-04-27 | 4 | -145/+0 |
* | sci-biology/bedtools/files: add upstream PR reference | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-04-25 | 2 | -0/+4 |
* | sci-biology/bedtools: add 2.31.1 | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-04-25 | 5 | -0/+352 |
* | sci-biology/treeviewx: Stabilize 0.5.1.20100823_p4 amd64, #930203 | ![](//www.gravatar.com/avatar/786f3a957bcc3a8d19160e824fc64b8e?s=13&d=retro) Sam James | 2024-04-18 | 1 | -1/+1 |
* | sci-biology/treeviewx: add github upstream metadata | ![](//www.gravatar.com/avatar/62f8ca529bbf9ee9aa3c1b4bf6619d17?s=13&d=retro) Pacho Ramos | 2024-04-18 | 1 | -0/+3 |
* | sci-biology/treeviewx: Update icon cache | ![](//www.gravatar.com/avatar/62f8ca529bbf9ee9aa3c1b4bf6619d17?s=13&d=retro) Pacho Ramos | 2024-04-18 | 1 | -2/+2 |
* | sci-biology/newick-utils: update EAPI 7 -> 8 | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-04-11 | 1 | -1/+1 |
* | sci-biology/newick-utils: update HOMEPAGE, SRC_URI to archive.org | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-04-11 | 1 | -2/+2 |
* | sci-biology/newick-utils: mark as LTO-unsafe | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-04-11 | 1 | -2/+7 |
* | sci-biology/kallisto: update EAPI 7 -> 8 | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-04-07 | 1 | -1/+1 |
* | sci-biology/kallisto: port to catch2 version 3 | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-04-07 | 3 | -9/+13 |
* | sci-biology/emboss: avoid file collision with dev-texlive/texlive-latexextra | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-03-30 | 1 | -0/+3 |
* | sci-biology/biopandas: Remove last-rited pkg | ![](//www.gravatar.com/avatar/ff5429ef741b434eb2011692832f810e?s=13&d=retro) Michał Górny | 2024-03-29 | 3 | -45/+0 |
* | sci-biology/bcftools: add 1.19 | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-03-26 | 2 | -0/+43 |
* | sci-biology/samtools: add 1.19.2 | ![](//www.gravatar.com/avatar/ad749c7d33947840e611b0e18be937fa?s=13&d=retro) David Seifert | 2024-03-26 | 2 | -0/+48 |
* | sci-biology/mothur: uncomment patch... | ![](//www.gravatar.com/avatar/786f3a957bcc3a8d19160e824fc64b8e?s=13&d=retro) Sam James | 2024-03-22 | 1 | -1/+1 |
* | sci-biology/mothur: add 1.48.0 | ![](//www.gravatar.com/avatar/786f3a957bcc3a8d19160e824fc64b8e?s=13&d=retro) Sam James | 2024-03-22 | 4 | -0/+139 |
* | sci-biology/qrna: add 2.0.4 | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-03-21 | 3 | -0/+443 |
* | sci-biology/t-coffee: mark as LTO-unsafe, strict-aliasing unsafe | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-03-20 | 1 | -1/+9 |
* | sci-biology/muscle: fix variable order | ![](//www.gravatar.com/avatar/786f3a957bcc3a8d19160e824fc64b8e?s=13&d=retro) Sam James | 2024-03-20 | 1 | -2/+1 |
* | sci-biology/muscle: drop unused flag-o-matic from 5.1.0 | ![](//www.gravatar.com/avatar/786f3a957bcc3a8d19160e824fc64b8e?s=13&d=retro) Sam James | 2024-03-20 | 1 | -1/+1 |
* | sci-biology/muscle: add 5.1.0 | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-03-20 | 3 | -0/+83 |
* | sci-biology/muscle: mark as LTO-unsafe, strict-aliasing unsafe | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-03-20 | 1 | -2/+10 |
* | sci-biology/glimmerhmm: update EAPI 7 -> 8 | ![](//www.gravatar.com/avatar/786f3a957bcc3a8d19160e824fc64b8e?s=13&d=retro) Sam James | 2024-03-12 | 1 | -3/+2 |
* | sci-biology/glimmerhmm: fix SRC_URI | ![](//www.gravatar.com/avatar/786f3a957bcc3a8d19160e824fc64b8e?s=13&d=retro) Sam James | 2024-03-12 | 1 | -1/+1 |
* | sci-biology/glimmerhmm: add 3.0.4 | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-03-12 | 3 | -0/+202 |
* | sci-biology/glimmerhmm: patch sources to fix LTO | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-03-12 | 2 | -1/+29 |
* | sci-biology/abyss: mark as LTO-unsafe | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-03-08 | 1 | -1/+6 |
* | sci-biology/abyss: remove useless sed | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-03-08 | 1 | -2/+1 |
* | sci-biology/bwa: mark as LTO-unsafe | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-02-29 | 1 | -2/+7 |
* | sci-biology/exonerate: mark LTO-unsafe | ![](//www.gravatar.com/avatar/a24234700c5b4c8e4e0bb7ee1d002993?s=13&d=retro) Eli Schwartz | 2024-02-29 | 1 | -2/+7 |
* | Move {sys-devel → dev-build}/cons | ![](//www.gravatar.com/avatar/ff5429ef741b434eb2011692832f810e?s=13&d=retro) Michał Górny | 2024-01-17 | 1 | -2/+3 |